File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111485ms, 91.70% of 121575ms total Dropped 1148 nodes (cum <= 607.88ms) flat flat% sum% cum cum% 0 0% 0% 121564ms 100% __libc_start_call_main 0 0% 0% 121564ms 100% __libc_start_main_impl 0 0% 0% 121564ms 100% _start 0 0% 0% 121562ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 121562ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 121562ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 121562ms 100% main 0 0% 0% 121526ms 100% AbstractConvergenceTester::Converge 0 0% 0% 121526ms 100% CxxTest::RealTestDescription::run 0 0% 0% 121526ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 121526ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 121526ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 121526ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0033% 0.0033% 120256ms 98.92% AbstractCardiacProblem::Solve 12ms 0.0099% 0.013% 119395ms 98.21% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.016% 67274ms 55.34% LinearSystem::Solve 5ms 0.0041% 0.02% 66693ms 54.86% KSPSolve 16ms 0.013% 0.033% 66688ms 54.85% KSPSolve_Private 12ms 0.0099% 0.043% 66232ms 54.48% KSPSolve_SYMMLQ 190ms 0.16% 0.2% 43016ms 35.38% AbstractCardiacTissue::SolveCellSystems 3ms 0.0025% 0.2% 37791ms 31.08% PCApply 4ms 0.0033% 0.2% 37778ms 31.07% PCApply_BJacobi_Singleblock 3ms 0.0025% 0.21% 35002ms 28.79% KSPSolve_PREONLY (partial-inline) 1ms 0.00082% 0.21% 33802ms 27.80% PCApply_ICC 9ms 0.0074% 0.22% 33801ms 27.80% MatSolve 33306ms 27.40% 27.61% 33792ms 27.80% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1405ms 1.16% 28.77% 33159ms 27.27% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 28.77% 32730ms 26.92% KSP_PCApply.lto_priv.18 6892ms 5.67% 34.44% 28727ms 23.63% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0082% 34.45% 22487ms 18.50% MatMult 1286ms 1.06% 35.50% 22477ms 18.49% MatMult_SeqAIJ (partial-inline) 20898ms 17.19% 52.69% 21396ms 17.60% MatMult_SeqAIJ_Inode (inline) 2048ms 1.68% 54.38% 14900ms 12.26% CardiacNewtonSolver::Solve 306ms 0.25% 54.63% 9052ms 7.45% AbstractCardiacTissue::UpdateCaches (inline) 4401ms 3.62% 58.25% 8582ms 7.06% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1861ms 1.53% 59.78% 8562ms 7.04% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1142ms 0.94% 60.72% 8035ms 6.61% BidomainSolver::SetupLinearSystem 1382ms 1.14% 61.86% 7700ms 6.33% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00082% 61.86% 7133ms 5.87% KSP_PCApply (partial-inline) 11ms 0.009% 61.87% 6562ms 5.40% KSPConvergedDefault 6046ms 4.97% 66.84% 6046ms 4.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3882ms 3.19% 70.03% 3926ms 3.23% __ieee754_log_fma 0 0% 70.03% 3830ms 3.15% boost::numeric::ublas::norm_inf (inline) 2558ms 2.10% 72.14% 3830ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.14% 3830ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.14% 3830ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 10ms 0.0082% 72.14% 3459ms 2.85% MatNullSpaceRemove 3381ms 2.78% 74.92% 3381ms 2.78% __memcpy_avx_unaligned_erms 0 0% 74.92% 3349ms 2.75% PetscMemcpy (inline) 29ms 0.024% 74.95% 3100ms 2.55% std::pow (inline) 375ms 0.31% 75.26% 3067ms 2.52% __pow 22ms 0.018% 75.28% 2906ms 2.39% VecCopy 1ms 0.00082% 75.28% 2883ms 2.37% VecCopy_Seq (partial-inline) 1693ms 1.39% 76.67% 2840ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2700ms 2.22% 78.89% 2700ms 2.22% ddot_ 372ms 0.31% 79.20% 2683ms 2.21% __ieee754_pow_fma 12ms 0.0099% 79.21% 2550ms 2.10% VecAXPY 2ms 0.0016% 79.21% 2538ms 2.09% VecAXPY_Seq 2525ms 2.08% 81.28% 2525ms 2.08% daxpy_ 3ms 0.0025% 81.29% 2198ms 1.81% VecDot 1ms 0.00082% 81.29% 2195ms 1.81% VecDot_Seq 2ms 0.0016% 81.29% 2194ms 1.80% VecXDot_Seq_Private.constprop.0 4ms 0.0033% 81.29% 2113ms 1.74% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0025% 81.29% 2018ms 1.66% VecMDot 18ms 0.015% 81.31% 2015ms 1.66% VecMXDot_Private 1988ms 1.64% 82.94% 1994ms 1.64% VecMDot_Seq 30ms 0.025% 82.97% 1732ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1480ms 1.22% 84.19% 1556ms 1.28% exp_inline (inline) 0 0% 84.19% 1433ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 10ms 0.0082% 84.19% 1431ms 1.18% VecMAXPY 1415ms 1.16% 85.36% 1421ms 1.17% VecMAXPY_Seq 1408ms 1.16% 86.52% 1408ms 1.16% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1405ms 1.16% 87.67% 1405ms 1.16% __memset_avx2_unaligned_erms 0 0% 87.67% 1393ms 1.15% PetscMemzero (inline) 0 0% 87.67% 1191ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.67% 1191ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.67% 1191ms 0.98% boost_numeric_ublas_abs (inline) 1191ms 0.98% 88.65% 1191ms 0.98% std::abs (inline) 4ms 0.0033% 88.66% 1141ms 0.94% boost::numeric::ublas::matrix_assign (inline) 4ms 0.0033% 88.66% 1133ms 0.93% VecDuplicate 866ms 0.71% 89.37% 1132ms 0.93% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 220ms 0.18% 89.55% 1128ms 0.93% boost::numeric::ublas::indexing_matrix_assign 0 0% 89.55% 1113ms 0.92% CuboidMeshConstructor::Construct 0 0% 89.55% 1112ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00082% 89.55% 1112ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0025% 89.56% 1005ms 0.83% Element::Element 3ms 0.0025% 89.56% 981ms 0.81% AbstractTetrahedralElement::CalculateJacobian 9ms 0.0074% 89.57% 968ms 0.8% PetscMallocA 9ms 0.0074% 89.57% 959ms 0.79% PetscMallocAlign (partial-inline) 1ms 0.00082% 89.57% 932ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 4ms 0.0033% 89.58% 877ms 0.72% BidomainAssembler::ComputeMatrixTerm 11ms 0.009% 89.59% 876ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 854ms 0.7% 90.29% 854ms 0.7% [libchaste_heart.so] 2ms 0.0016% 90.29% 793ms 0.65% BidomainProblem::WriteOneStep 4ms 0.0033% 90.29% 792ms 0.65% VecNorm 9ms 0.0074% 90.30% 792ms 0.65% VecScale 2ms 0.0016% 90.30% 783ms 0.64% VecScale_Seq 779ms 0.64% 90.94% 779ms 0.64% dscal_ 2ms 0.0016% 90.94% 774ms 0.64% VecNorm_Seq 713ms 0.59% 91.53% 713ms 0.59% log_inline (inline) 2ms 0.0016% 91.53% 712ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 196ms 0.16% 91.69% 708ms 0.58% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0016% 91.70% 692ms 0.57% VecDuplicate_Seq 0 0% 91.70% 680ms 0.56% AbstractFeAssemblerInterface::Assemble (inline) 6ms 0.0049% 91.70% 614ms 0.51% VecSetType