File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 422ms, 86.83% of 486ms total Dropped 207 nodes (cum <= 2.43ms) flat flat% sum% cum cum% 0 0% 0% 475ms 97.74% __libc_start_call_main 0 0% 0% 475ms 97.74% __libc_start_main_impl 0 0% 0% 475ms 97.74% _start 0 0% 0% 472ms 97.12% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 472ms 97.12% CxxTest::TestRunner::runAllTests 0 0% 0% 472ms 97.12% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 472ms 97.12% main 0 0% 0% 433ms 89.09% CxxTest::RealTestDescription::run 0 0% 0% 433ms 89.09% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 433ms 89.09% CxxTest::TestRunner::runTest (inline) 0 0% 0% 433ms 89.09% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 433ms 89.09% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 428ms 88.07% AbstractCardiacProblem::Solve 0 0% 0% 427ms 87.86% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 389ms 80.04% LinearSystem::Solve 0 0% 0% 387ms 79.63% KSPSolve 0 0% 0% 387ms 79.63% KSPSolve_CG 0 0% 0% 387ms 79.63% KSPSolve_Private 0 0% 0% 226ms 46.50% KSP_PCApply.lto_priv.7 0 0% 0% 215ms 44.24% PCApply 0 0% 0% 215ms 44.24% PCApply_BJacobi_Singleblock 0 0% 0% 185ms 38.07% KSPSolve_PREONLY (partial-inline) 0 0% 0% 178ms 36.63% MatSolve 177ms 36.42% 36.42% 178ms 36.63% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.42% 178ms 36.63% PCApply_ICC 0 0% 36.42% 78ms 16.05% MatMult 0 0% 36.42% 78ms 16.05% MatMult_SeqAIJ 78ms 16.05% 52.47% 78ms 16.05% MatMult_SeqAIJ_Inode (inline) 58ms 11.93% 64.40% 58ms 11.93% ddot_ 0 0% 64.40% 36ms 7.41% CxxTest::RealWorldDescription::setUp 0 0% 64.40% 36ms 7.41% PMPI_Init_thread 0 0% 64.40% 36ms 7.41% PetscInitialize 0 0% 64.40% 36ms 7.41% PetscSetup::setUpWorld 0 0% 64.40% 36ms 7.41% PetscSetupUtils::CommonSetup 0 0% 64.40% 36ms 7.41% PetscSetupUtils::InitialisePetsc 0 0% 64.40% 36ms 7.41% ompi_mpi_init 0 0% 64.40% 35ms 7.20% VecTDot 0 0% 64.40% 35ms 7.20% VecTDot_Seq 0 0% 64.40% 35ms 7.20% VecXDot_Seq_Private.constprop.0 1ms 0.21% 64.61% 33ms 6.79% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 64.81% 29ms 5.97% 0 0% 64.81% 29ms 5.97% MatNullSpaceRemove 0 0% 64.81% 25ms 5.14% orte_init 0 0% 64.81% 23ms 4.73% VecNorm 0 0% 64.81% 23ms 4.73% VecNorm_Seq 1ms 0.21% 65.02% 21ms 4.32% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.02% 18ms 3.70% VecMDot 1ms 0.21% 65.23% 18ms 3.70% VecMXDot_Private 17ms 3.50% 68.72% 17ms 3.50% VecMDot_Seq 1ms 0.21% 68.93% 16ms 3.29% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.93% 16ms 3.29% hwloc_topology_load 0 0% 68.93% 15ms 3.09% VecAYPX 15ms 3.09% 72.02% 15ms 3.09% VecAYPX_Seq 0 0% 72.02% 15ms 3.09% hwloc_linux_get_tid_last_cpu_location 0 0% 72.02% 14ms 2.88% __GI__dl_catch_exception 0 0% 72.02% 14ms 2.88% _dl_catch_error 0 0% 72.02% 14ms 2.88% _dlerror_run 2ms 0.41% 72.43% 13ms 2.67% EulerIvpOdeSolver::CalculateNextYValue 0 0% 72.43% 13ms 2.67% mca_base_framework_open 0 0% 72.43% 13ms 2.67% opal_stackframe_output 0 0% 72.43% 12ms 2.47% mca_base_framework_components_register 0 0% 72.43% 12ms 2.47% mca_base_framework_register 3ms 0.62% 73.05% 11ms 2.26% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 73.05% 11ms 2.26% KSP_PCApply (partial-inline) 1ms 0.21% 73.25% 11ms 2.26% VecMAXPY 0 0% 73.25% 11ms 2.26% ___dlopen 0 0% 73.25% 11ms 2.26% _dl_init 0 0% 73.25% 11ms 2.26% _dl_open 0 0% 73.25% 11ms 2.26% call_init (inline) 0 0% 73.25% 11ms 2.26% dl_open_worker 0 0% 73.25% 11ms 2.26% dlopen_doit 0 0% 73.25% 11ms 2.26% dlopen_implementation (inline) 0 0% 73.25% 10ms 2.06% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.62% 73.87% 10ms 2.06% CellLuoRudy1991FromCellML::GetIIonic 10ms 2.06% 75.93% 10ms 2.06% VecMAXPY_Seq 0 0% 75.93% 10ms 2.06% mca_base_component_find 0 0% 75.93% 10ms 2.06% mca_base_component_repository_open 0 0% 75.93% 9ms 1.85% _dl_start_user 0 0% 75.93% 9ms 1.85% dl_open_worker_begin 2ms 0.41% 76.34% 8ms 1.65% _dl_runtime_resolve_xsavec 0 0% 76.34% 7ms 1.44% VecDuplicate 0 0% 76.34% 7ms 1.44% VecDuplicate_Seq 5ms 1.03% 77.37% 7ms 1.44% __GI___exp 0 0% 77.37% 7ms 1.44% _dl_lookup_symbol_x 0 0% 77.37% 6ms 1.23% VecAXPY 0 0% 77.37% 6ms 1.23% VecAXPY_Seq 1ms 0.21% 77.57% 6ms 1.23% __ieee754_pow_fma 0 0% 77.57% 6ms 1.23% __pow 1ms 0.21% 77.78% 6ms 1.23% _dl_fixup 6ms 1.23% 79.01% 6ms 1.23% daxpy_ 0 0% 79.01% 6ms 1.23% opal_hwloc_base_get_topology 0 0% 79.01% 6ms 1.23% orte_ess_base_proc_binding 0 0% 79.01% 6ms 1.23% std::pow (inline) 0 0% 79.01% 5ms 1.03% AbstractCardiacProblem::Initialise 2ms 0.41% 79.42% 5ms 1.03% PetscMallocA 1ms 0.21% 79.63% 5ms 1.03% VecDestroy 1ms 0.21% 79.84% 5ms 1.03% __GI___libc_malloc 0 0% 79.84% 5ms 1.03% _dl_map_object 5ms 1.03% 80.86% 5ms 1.03% do_lookup_x 2ms 0.41% 81.28% 4ms 0.82% BidomainSolver::SetupLinearSystem 0 0% 81.28% 4ms 0.82% KSPConvergedDefault 0 0% 81.28% 4ms 0.82% PetscMemcpy (inline) 0 0% 81.28% 4ms 0.82% VecCreate 0 0% 81.28% 4ms 0.82% XOpenDisplay 0 0% 81.28% 4ms 0.82% [hwloc_gl.so] 0 0% 81.28% 4ms 0.82% [libxcb.so.1.1.0] 0 0% 81.28% 4ms 0.82% _XConnectXCB 4ms 0.82% 82.10% 4ms 0.82% __GI___libc_read 4ms 0.82% 82.92% 4ms 0.82% __memcpy_avx_unaligned_erms 3ms 0.62% 83.54% 4ms 0.82% _int_malloc 4ms 0.82% 84.36% 4ms 0.82% log_inline (inline) 0 0% 84.36% 4ms 0.82% mca_base_framework_components_open 0 0% 84.36% 4ms 0.82% mca_topo_base_dist_graph_neighbors_count 0 0% 84.36% 4ms 0.82% xcb_connect_to_display_with_auth_info 0 0% 84.36% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 84.36% 3ms 0.62% PetscFinalize 1ms 0.21% 84.57% 3ms 0.62% PetscMallocAlign 0 0% 84.57% 3ms 0.62% PetscMemzero (inline) 0 0% 84.57% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 84.57% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 84.57% 3ms 0.62% VecCopy 0 0% 84.57% 3ms 0.62% VecCopy_Seq (partial-inline) 0 0% 84.57% 3ms 0.62% VecSet 0 0% 84.57% 3ms 0.62% VecSet_Seq (partial-inline) 3ms 0.62% 85.19% 3ms 0.62% [libchaste_heart.so] 0 0% 85.19% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 3ms 0.62% 85.80% 3ms 0.62% __GI___fstatat64 0 0% 85.80% 3ms 0.62% __GI_exit 0 0% 85.80% 3ms 0.62% __cxa_finalize 0 0% 85.80% 3ms 0.62% __dlclose 3ms 0.62% 86.42% 3ms 0.62% __memset_avx2_unaligned_erms 0 0% 86.42% 3ms 0.62% __run_exit_handlers 0 0% 86.42% 3ms 0.62% _dl_call_fini 0 0% 86.42% 3ms 0.62% _dl_close 1ms 0.21% 86.63% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.63% 3ms 0.62% _dl_fini 0 0% 86.63% 3ms 0.62% _dl_map_object_deps 0 0% 86.63% 3ms 0.62% _dl_map_object_from_fd 0 0% 86.63% 3ms 0.62% _dl_map_segments (inline) 0 0% 86.63% 3ms 0.62% _dl_open_relocate_one_object (inline) 0 0% 86.63% 3ms 0.62% _dl_relocate_object 0 0% 86.63% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.21% 86.83% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 86.83% 3ms 0.62% mca_base_component_repository_release 0 0% 86.83% 3ms 0.62% ompi_mpi_finalize