File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 118169ms, 91.30% of 129433ms total Dropped 1135 nodes (cum <= 647.16ms) flat flat% sum% cum cum% 0 0% 0% 129419ms 100% __libc_start_call_main 0 0% 0% 129419ms 100% __libc_start_main_impl 0 0% 0% 129419ms 100% _start 0 0% 0% 129416ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 129416ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 129416ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 129416ms 100% main 0 0% 0% 129370ms 100% CxxTest::RealTestDescription::run 0 0% 0% 129370ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 129370ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 129370ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 129370ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 129369ms 100% AbstractConvergenceTester::Converge 3ms 0.0023% 0.0023% 128169ms 99.02% AbstractCardiacProblem::Solve 6ms 0.0046% 0.007% 127321ms 98.37% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0046% 0.012% 69264ms 53.51% LinearSystem::Solve 1ms 0.00077% 0.012% 68683ms 53.06% KSPSolve 12ms 0.0093% 0.022% 68682ms 53.06% KSPSolve_Private 17ms 0.013% 0.035% 68345ms 52.80% KSPSolve_SYMMLQ 424ms 0.33% 0.36% 48828ms 37.72% AbstractCardiacTissue::SolveCellSystems 8ms 0.0062% 0.37% 39416ms 30.45% PCApply 7ms 0.0054% 0.37% 39394ms 30.44% PCApply_BJacobi_Singleblock 923ms 0.71% 1.09% 38556ms 29.79% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0031% 1.09% 36854ms 28.47% KSPSolve_PREONLY (partial-inline) 1ms 0.00077% 1.09% 35809ms 27.67% PCApply_ICC 8ms 0.0062% 1.10% 35808ms 27.67% MatSolve 35421ms 27.37% 28.46% 35800ms 27.66% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 7669ms 5.93% 34.39% 34339ms 26.53% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 0 0% 34.39% 33876ms 26.17% KSP_PCApply.lto_priv.18 12ms 0.0093% 34.40% 22560ms 17.43% MatMult 317ms 0.24% 34.64% 22548ms 17.42% MatMult_SeqAIJ (partial-inline) 22029ms 17.02% 51.66% 22542ms 17.42% MatMult_SeqAIJ_Inode (inline) 2271ms 1.75% 53.42% 17217ms 13.30% CardiacNewtonSolver::Solve 1468ms 1.13% 54.55% 10952ms 8.46% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5699ms 4.40% 58.95% 10268ms 7.93% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 9179ms 7.09% 66.05% 9179ms 7.09% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 222ms 0.17% 66.22% 8903ms 6.88% AbstractCardiacTissue::UpdateCaches (inline) 1745ms 1.35% 67.57% 8314ms 6.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1256ms 0.97% 68.54% 8035ms 6.21% BidomainSolver::SetupLinearSystem 3ms 0.0023% 68.54% 7377ms 5.70% KSP_PCApply (partial-inline) 8ms 0.0062% 68.54% 6978ms 5.39% KSPConvergedDefault 4256ms 3.29% 71.83% 4354ms 3.36% __ieee754_log_fma 0 0% 71.83% 4173ms 3.22% boost::numeric::ublas::norm_inf (inline) 2872ms 2.22% 74.05% 4173ms 3.22% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.05% 4173ms 3.22% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.05% 4173ms 3.22% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 13ms 0.01% 74.06% 3252ms 2.51% MatNullSpaceRemove 3251ms 2.51% 76.57% 3251ms 2.51% ddot_ 3235ms 2.50% 79.07% 3235ms 2.50% __memcpy_avx_unaligned_erms 0 0% 79.07% 3202ms 2.47% PetscMemcpy (inline) 1980ms 1.53% 80.60% 3101ms 2.40% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 36ms 0.028% 80.63% 3100ms 2.40% std::pow (inline) 397ms 0.31% 80.94% 3048ms 2.35% __pow 26ms 0.02% 80.96% 2868ms 2.22% VecCopy 3ms 0.0023% 80.96% 2839ms 2.19% VecCopy_Seq (partial-inline) 355ms 0.27% 81.23% 2614ms 2.02% __ieee754_pow_fma 8ms 0.0062% 81.24% 2607ms 2.01% VecDot 0 0% 81.24% 2599ms 2.01% VecDot_Seq 9ms 0.007% 81.25% 2599ms 2.01% VecXDot_Seq_Private.constprop.0 20ms 0.015% 81.26% 2309ms 1.78% VecAXPY 9ms 0.007% 81.27% 2289ms 1.77% VecAXPY_Seq 2267ms 1.75% 83.02% 2267ms 1.75% daxpy_ 0 0% 83.02% 2017ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0031% 83.02% 2010ms 1.55% VecMDot 10ms 0.0077% 83.03% 2006ms 1.55% VecMXDot_Private 1977ms 1.53% 84.56% 1989ms 1.54% VecMDot_Seq 21ms 0.016% 84.58% 1649ms 1.27% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1469ms 1.13% 85.71% 1530ms 1.18% exp_inline (inline) 0 0% 85.71% 1387ms 1.07% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.71% 1294ms 1% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.71% 1294ms 1% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.71% 1294ms 1% boost_numeric_ublas_abs (inline) 1294ms 1% 86.71% 1294ms 1% std::abs (inline) 11ms 0.0085% 86.72% 1229ms 0.95% VecMAXPY 1213ms 0.94% 87.66% 1218ms 0.94% VecMAXPY_Seq 9ms 0.007% 87.66% 1081ms 0.84% boost::numeric::ublas::matrix_assign (inline) 238ms 0.18% 87.85% 1066ms 0.82% boost::numeric::ublas::indexing_matrix_assign 730ms 0.56% 88.41% 1064ms 0.82% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1054ms 0.81% 89.22% 1054ms 0.81% [libchaste_heart.so] 0 0% 89.22% 1029ms 0.8% CuboidMeshConstructor::Construct 0 0% 89.22% 1028ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0015% 89.23% 1028ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 0 0% 89.23% 1004ms 0.78% VecNorm 0 0% 89.23% 997ms 0.77% VecNorm_Seq 4ms 0.0031% 89.23% 923ms 0.71% Element::Element 908ms 0.7% 89.93% 908ms 0.7% __memset_avx2_unaligned_erms 0 0% 89.93% 904ms 0.7% PetscMemzero (inline) 3ms 0.0023% 89.93% 884ms 0.68% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0046% 89.94% 884ms 0.68% VecScale 4ms 0.0031% 89.94% 878ms 0.68% VecScale_Seq 871ms 0.67% 90.61% 871ms 0.67% dscal_ 5ms 0.0039% 90.62% 864ms 0.67% BidomainAssembler::ComputeMatrixTerm 8ms 0.0062% 90.62% 856ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0015% 90.63% 844ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00077% 90.63% 809ms 0.63% AbstractBidomainSolver::FinaliseLinearSystem 166ms 0.13% 90.75% 805ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0015% 90.76% 803ms 0.62% VecDuplicate 0 0% 90.76% 773ms 0.6% BidomainProblem::WriteOneStep 0 0% 90.76% 693ms 0.54% VecNorm_MPI 1ms 0.00077% 90.76% 693ms 0.54% VecNorm_MPI_Default.constprop.0 688ms 0.53% 91.29% 688ms 0.53% log_inline (inline) 12ms 0.0093% 91.30% 648ms 0.5% PetscMallocA