File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12886ms, 86.27% of 14936ms total Dropped 788 nodes (cum <= 74.68ms) flat flat% sum% cum cum% 0 0% 0% 14924ms 99.92% __libc_start_call_main 0 0% 0% 14924ms 99.92% __libc_start_main_impl 0 0% 0% 14924ms 99.92% _start 0 0% 0% 14921ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14921ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14921ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14921ms 99.90% main 0 0% 0% 14879ms 99.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14879ms 99.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14879ms 99.62% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14856ms 99.46% AbstractCardiacProblem::Solve 3ms 0.02% 0.033% 11317ms 75.77% AbstractDynamicLinearPdeSolver::Solve 72ms 0.48% 0.52% 8968ms 60.04% AbstractCardiacTissue::SolveCellSystems 87ms 0.58% 1.10% 5388ms 36.07% AbstractCardiacCell::ComputeExceptVoltage 107ms 0.72% 1.81% 4729ms 31.66% AbstractOneStepIvpOdeSolver::InternalSolve 167ms 1.12% 2.93% 4051ms 27.12% EulerIvpOdeSolver::CalculateNextYValue 842ms 5.64% 8.57% 3843ms 25.73% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1870ms 12.52% 21.09% 3521ms 23.57% __GI___exp 0 0% 21.09% 3470ms 23.23% MonodomainProblem::WriteOneStep 2ms 0.013% 21.10% 3334ms 22.32% H5Dwrite 1ms 0.0067% 21.11% 3332ms 22.31% Hdf5DataWriter::PutVector 1ms 0.0067% 21.12% 3307ms 22.14% H5D__write 137ms 0.92% 22.03% 2832ms 18.96% AbstractCardiacTissue::UpdateCaches (inline) 788ms 5.28% 27.31% 2619ms 17.53% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.31% 2009ms 13.45% H5D__chunk_collective_write 23ms 0.15% 27.46% 2009ms 13.45% H5F_set_coll_metadata_reads 18ms 0.12% 27.58% 1752ms 11.73% H5FD_s3comms_uriencode 1282ms 8.58% 36.17% 1590ms 10.65% __ieee754_exp_fma 0 0% 36.17% 1557ms 10.42% LinearSystem::Solve 0 0% 36.17% 1438ms 9.63% KSPSolve 7ms 0.047% 36.21% 1438ms 9.63% KSPSolve_Private 0 0% 36.21% 1427ms 9.55% KSPSolve_CG 61ms 0.41% 36.62% 1374ms 9.20% 1ms 0.0067% 36.63% 1360ms 9.11% H5F_block_write 1ms 0.0067% 36.64% 1359ms 9.10% H5PB_write 1ms 0.0067% 36.64% 1358ms 9.09% H5F__accum_write 0 0% 36.64% 1357ms 9.09% H5FD_write 1ms 0.0067% 36.65% 1272ms 8.52% H5D__mpio_select_write 9ms 0.06% 36.71% 1184ms 7.93% H5D__chunk_cacheable 0 0% 36.71% 1163ms 7.79% PMPI_File_write_at_all 1132ms 7.58% 44.29% 1134ms 7.59% __GI_pwritev64 332ms 2.22% 46.51% 1053ms 7.05% H5S_select_iterate 6ms 0.04% 46.55% 981ms 6.57% std::pow (inline) 117ms 0.78% 47.34% 974ms 6.52% __pow 70ms 0.47% 47.80% 856ms 5.73% __ieee754_pow_fma 0 0% 47.80% 810ms 5.42% PCApply 1ms 0.0067% 47.81% 804ms 5.38% PCApply_BJacobi_Singleblock 0 0% 47.81% 770ms 5.16% KSPSolve_PREONLY 4ms 0.027% 47.84% 768ms 5.14% MatSolve 0 0% 47.84% 768ms 5.14% PCApply_ICC 332ms 2.22% 50.06% 767ms 5.14% MonodomainSolver::SetupLinearSystem 756ms 5.06% 55.12% 764ms 5.12% MatSolve_SeqSBAIJ_1_NaturalOrdering 83ms 0.56% 55.68% 736ms 4.93% H5D__chunk_set_sizes 6ms 0.04% 55.72% 609ms 4.08% MatMult 602ms 4.03% 59.75% 603ms 4.04% MatMult_SeqAIJ 2ms 0.013% 59.76% 581ms 3.89% KSP_PCApply.lto_priv.7 89ms 0.6% 60.36% 508ms 3.40% H5S_mpio_space_type 280ms 1.87% 62.23% 502ms 3.36% CellLuoRudy1991FromCellML::VerifyStateVariables 427ms 2.86% 65.09% 427ms 2.86% log_inline (inline) 313ms 2.10% 67.19% 324ms 2.17% exp_inline (inline) 3ms 0.02% 67.21% 286ms 1.91% KSPConvergedDefault 112ms 0.75% 67.96% 281ms 1.88% TimeStepper::TimeStepper 197ms 1.32% 69.28% 259ms 1.73% top12 (inline) 246ms 1.65% 70.92% 246ms 1.65% [libchaste_heart.so] 12ms 0.08% 71.00% 233ms 1.56% H5VM_chunk_index 0 0% 71.00% 233ms 1.56% KSP_PCApply 44ms 0.29% 71.30% 221ms 1.48% __GI___libc_malloc 144ms 0.96% 72.26% 205ms 1.37% _int_malloc 13ms 0.087% 72.35% 201ms 1.35% ompi_datatype_destroy 9ms 0.06% 72.41% 200ms 1.34% MPI_Type_free 44ms 0.29% 72.70% 196ms 1.31% AbstractCardiacCell::SetVoltage (partial-inline) 10ms 0.067% 72.77% 178ms 1.19% ompi_datatype_create 42ms 0.28% 73.05% 175ms 1.17% __GI___libc_free 9ms 0.06% 73.11% 165ms 1.10% ompi_info_register_framework_params 164ms 1.10% 74.21% 164ms 1.10% TimeStepper::CalculateNextTime 33ms 0.22% 74.43% 163ms 1.09% ompi_datatype_release_args 157ms 1.05% 75.48% 157ms 1.05% asuint64 (inline) 64ms 0.43% 75.91% 153ms 1.02% H5S_hyper_add_span_element 153ms 1.02% 76.93% 153ms 1.02% ddot_ 35ms 0.23% 77.17% 148ms 0.99% H5S_set_version 118ms 0.79% 77.96% 144ms 0.96% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 103ms 0.69% 78.65% 141ms 0.94% AbstractOneStepIvpOdeSolver::Solve 60ms 0.4% 79.05% 139ms 0.93% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 79.05% 138ms 0.92% Hdf5DataWriter::PutUnlimitedVariable 105ms 0.7% 79.75% 133ms 0.89% AbstractParameterisedSystem::SetAnyVariable 55ms 0.37% 80.12% 133ms 0.89% _int_free 1ms 0.0067% 80.13% 127ms 0.85% PMPI_File_set_view 116ms 0.78% 80.91% 116ms 0.78% __ieee754_log_fma 114ms 0.76% 81.67% 114ms 0.76% H5VM_chunk_index_scaled 114ms 0.76% 82.43% 114ms 0.76% __memcpy_avx_unaligned_erms 46ms 0.31% 82.74% 113ms 0.76% H5VM_array_calc 91ms 0.61% 83.35% 112ms 0.75% AbstractParameterisedSystem::GetAnyVariable 108ms 0.72% 84.07% 108ms 0.72% H5VM_array_offset_pre 0 0% 84.07% 97ms 0.65% VecDuplicate 1ms 0.0067% 84.08% 97ms 0.65% VecDuplicate_MPI 1ms 0.0067% 84.09% 97ms 0.65% VecNorm 0 0% 84.09% 91ms 0.61% VecTDot 0 0% 84.09% 91ms 0.61% VecTDot_Seq 0 0% 84.09% 91ms 0.61% VecXDot_Seq_Private.constprop.0 0 0% 84.09% 90ms 0.6% PMPI_Type_create_resized 0 0% 84.09% 90ms 0.6% ompi_datatype_duplicate 2ms 0.013% 84.10% 89ms 0.6% VecNorm_Seq 1ms 0.0067% 84.11% 88ms 0.59% std::vector::_M_assign_aux (inline) 0 0% 84.11% 88ms 0.59% std::vector::assign (inline) 84ms 0.56% 84.67% 84ms 0.56% std::vector::operator[] (inline) 9ms 0.06% 84.73% 83ms 0.56% opal_dss_print_buffer_contents 47ms 0.31% 85.04% 80ms 0.54% TimeStepper::AdvanceOneTimeStep 78ms 0.52% 85.57% 78ms 0.52% std::isinf (inline) 76ms 0.51% 86.07% 76ms 0.51% ReplicatableVector::operator[] 27ms 0.18% 86.25% 75ms 0.5% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 86.27% 75ms 0.5% MPI_Type_create_hindexed