File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 429ms, 87.37% of 491ms total Dropped 210 nodes (cum <= 2.46ms) flat flat% sum% cum cum% 0 0% 0% 483ms 98.37% __libc_start_call_main 0 0% 0% 483ms 98.37% __libc_start_main_impl 0 0% 0% 483ms 98.37% _start 0 0% 0% 480ms 97.76% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 480ms 97.76% CxxTest::TestRunner::runAllTests 0 0% 0% 480ms 97.76% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 480ms 97.76% main 0 0% 0% 434ms 88.39% CxxTest::RealTestDescription::run 0 0% 0% 434ms 88.39% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 434ms 88.39% CxxTest::TestRunner::runTest (inline) 0 0% 0% 434ms 88.39% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 434ms 88.39% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 428ms 87.17% AbstractCardiacProblem::Solve 0 0% 0% 428ms 87.17% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 390ms 79.43% LinearSystem::Solve 0 0% 0% 387ms 78.82% KSPSolve 0 0% 0% 387ms 78.82% KSPSolve_Private 0 0% 0% 386ms 78.62% KSPSolve_CG 0 0% 0% 236ms 48.07% KSP_PCApply.lto_priv.7 0 0% 0% 227ms 46.23% PCApply 0 0% 0% 227ms 46.23% PCApply_BJacobi_Singleblock 0 0% 0% 200ms 40.73% KSPSolve_PREONLY (partial-inline) 0 0% 0% 193ms 39.31% MatSolve 190ms 38.70% 38.70% 193ms 39.31% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 38.70% 193ms 39.31% PCApply_ICC 0 0% 38.70% 64ms 13.03% MatMult 1ms 0.2% 38.90% 64ms 13.03% MatMult_SeqAIJ 63ms 12.83% 51.73% 63ms 12.83% MatMult_SeqAIJ_Inode (inline) 55ms 11.20% 62.93% 55ms 11.20% ddot_ 1ms 0.2% 63.14% 43ms 8.76% VecTDot 0 0% 63.14% 42ms 8.55% CxxTest::RealWorldDescription::setUp 0 0% 63.14% 42ms 8.55% PMPI_Init_thread 0 0% 63.14% 42ms 8.55% PetscInitialize 0 0% 63.14% 42ms 8.55% PetscSetup::setUpWorld 0 0% 63.14% 42ms 8.55% PetscSetupUtils::CommonSetup 0 0% 63.14% 42ms 8.55% PetscSetupUtils::InitialisePetsc 0 0% 63.14% 42ms 8.55% VecTDot_Seq 0 0% 63.14% 42ms 8.55% VecXDot_Seq_Private.constprop.0 0 0% 63.14% 42ms 8.55% ompi_mpi_init 1ms 0.2% 63.34% 35ms 7.13% 0 0% 63.34% 31ms 6.31% MatNullSpaceRemove 0 0% 63.34% 30ms 6.11% AbstractCardiacTissue::SolveCellSystems 0 0% 63.34% 25ms 5.09% orte_init 0 0% 63.34% 18ms 3.67% VecMDot 18ms 3.67% 67.01% 18ms 3.67% VecMDot_Seq 0 0% 67.01% 18ms 3.67% VecMXDot_Private 0 0% 67.01% 18ms 3.67% __GI__dl_catch_exception 0 0% 67.01% 18ms 3.67% _dl_catch_error 0 0% 67.01% 18ms 3.67% _dlerror_run 0 0% 67.01% 18ms 3.67% mca_base_framework_open 0 0% 67.01% 17ms 3.46% AbstractCardiacCell::ComputeExceptVoltage 0 0% 67.01% 17ms 3.46% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.41% 67.41% 17ms 3.46% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 67.41% 17ms 3.46% EulerIvpOdeSolver::CalculateNextYValue 8ms 1.63% 69.04% 17ms 3.46% __GI___exp 0 0% 69.04% 16ms 3.26% ___dlopen 0 0% 69.04% 16ms 3.26% _dl_open 0 0% 69.04% 16ms 3.26% dl_open_worker 0 0% 69.04% 16ms 3.26% dlopen_doit 0 0% 69.04% 16ms 3.26% dlopen_implementation (inline) 0 0% 69.04% 16ms 3.26% hwloc_topology_load 0 0% 69.04% 16ms 3.26% mca_base_framework_components_register 0 0% 69.04% 16ms 3.26% mca_base_framework_register 0 0% 69.04% 16ms 3.26% opal_stackframe_output 0 0% 69.04% 15ms 3.05% VecNorm 0 0% 69.04% 15ms 3.05% VecNorm_Seq 0 0% 69.04% 14ms 2.85% KSP_PCApply (partial-inline) 0 0% 69.04% 14ms 2.85% VecAYPX 14ms 2.85% 71.89% 14ms 2.85% VecAYPX_Seq 0 0% 71.89% 14ms 2.85% hwloc_linux_get_tid_last_cpu_location 0 0% 71.89% 14ms 2.85% mca_base_component_find 0 0% 71.89% 14ms 2.85% mca_base_component_repository_open 0 0% 71.89% 13ms 2.65% VecMAXPY 13ms 2.65% 74.54% 13ms 2.65% VecMAXPY_Seq 0 0% 74.54% 13ms 2.65% _dl_init 0 0% 74.54% 13ms 2.65% call_init (inline) 1ms 0.2% 74.75% 11ms 2.24% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 74.75% 10ms 2.04% dl_open_worker_begin 1ms 0.2% 74.95% 10ms 2.04% mca_base_framework_components_open 2ms 0.41% 75.36% 9ms 1.83% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.36% 9ms 1.83% PetscMemcpy (inline) 0 0% 75.36% 9ms 1.83% VecDuplicate 6ms 1.22% 76.58% 9ms 1.83% __ieee754_exp_fma 0 0% 76.58% 9ms 1.83% mca_topo_base_dist_graph_neighbors_count 2ms 0.41% 76.99% 8ms 1.63% VecAXPY 3ms 0.61% 77.60% 7ms 1.43% BidomainSolver::SetupLinearSystem 0 0% 77.60% 7ms 1.43% KSPConvergedDefault 0 0% 77.60% 7ms 1.43% VecDuplicate_Seq 7ms 1.43% 79.02% 7ms 1.43% __memcpy_avx_unaligned_erms 1ms 0.2% 79.23% 7ms 1.43% _dl_map_object 0 0% 79.23% 7ms 1.43% _dl_start_user 2ms 0.41% 79.63% 6ms 1.22% PetscMallocA 0 0% 79.63% 6ms 1.22% VecAXPY_Seq 6ms 1.22% 80.86% 6ms 1.22% daxpy_ 0 0% 80.86% 6ms 1.22% opal_hwloc_base_get_topology 0 0% 80.86% 6ms 1.22% orte_ess_base_proc_binding 5ms 1.02% 81.87% 5ms 1.02% __GI___clock_nanosleep 0 0% 81.87% 5ms 1.02% __GI___nanosleep 2ms 0.41% 82.28% 5ms 1.02% boost::serialization::singleton::get_instance 0 0% 82.28% 5ms 1.02% usleep 0 0% 82.28% 4ms 0.81% CxxTest::RealWorldDescription::tearDown 0 0% 82.28% 4ms 0.81% PetscFinalize 0 0% 82.28% 4ms 0.81% PetscMallocAlign 0 0% 82.28% 4ms 0.81% PetscSetup::tearDownWorld 0 0% 82.28% 4ms 0.81% PetscSetupUtils::CommonFinalize 0 0% 82.28% 4ms 0.81% VecCopy 0 0% 82.28% 4ms 0.81% VecCopy_Seq (partial-inline) 0 0% 82.28% 4ms 0.81% VecDestroy 0 0% 82.28% 4ms 0.81% VecSetType 4ms 0.81% 83.10% 4ms 0.81% __GI___libc_read 0 0% 83.10% 4ms 0.81% ompi_mpi_finalize 0 0% 83.10% 3ms 0.61% AbstractCardiacProblem::Initialise 0 0% 83.10% 3ms 0.61% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.2% 83.30% 3ms 0.61% PMPI_Comm_get_attr 0 0% 83.30% 3ms 0.61% PetscHeaderDestroy_Private 0 0% 83.30% 3ms 0.61% VecCreate 0 0% 83.30% 3ms 0.61% VecCreate_Seq 0 0% 83.30% 3ms 0.61% XOpenDisplay 0 0% 83.30% 3ms 0.61% [hwloc_gl.so] 3ms 0.61% 83.91% 3ms 0.61% [libchaste_heart.so] 0 0% 83.91% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 83.91% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 83.91% 3ms 0.61% _XConnectXCB 1ms 0.2% 84.11% 3ms 0.61% __GI___libc_free 0 0% 84.11% 3ms 0.61% __GI___libc_malloc 0 0% 84.11% 3ms 0.61% __GI_exit 3ms 0.61% 84.73% 3ms 0.61% __GI_socket 0 0% 84.73% 3ms 0.61% __cxa_finalize 3ms 0.61% 85.34% 3ms 0.61% __libc_openat64 0 0% 85.34% 3ms 0.61% __run_exit_handlers 3ms 0.61% 85.95% 3ms 0.61% __strcmp_avx2 0 0% 85.95% 3ms 0.61% _dl_call_fini 0 0% 85.95% 3ms 0.61% _dl_fini 0 0% 85.95% 3ms 0.61% _dl_map_object_from_fd 0 0% 85.95% 3ms 0.61% _dl_map_segments (inline) 2ms 0.41% 86.35% 3ms 0.61% _dl_runtime_resolve_xsavec 1ms 0.2% 86.56% 3ms 0.61% _int_malloc 0 0% 86.56% 3ms 0.61% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 86.56% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.56% 3ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.56% 3ms 0.61% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 1ms 0.2% 86.76% 3ms 0.61% std::pow (inline) 3ms 0.61% 87.37% 3ms 0.61% strcmp 0 0% 87.37% 3ms 0.61% xcb_connect_to_display_with_auth_info