File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12759ms, 85.78% of 14874ms total Dropped 745 nodes (cum <= 74.37ms) flat flat% sum% cum cum% 0 0% 0% 14865ms 99.94% __libc_start_call_main 0 0% 0% 14865ms 99.94% __libc_start_main_impl 0 0% 0% 14865ms 99.94% _start 0 0% 0% 14862ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14862ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14862ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14862ms 99.92% main 0 0% 0% 14822ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14822ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14822ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14799ms 99.50% AbstractCardiacProblem::Solve 3ms 0.02% 0.02% 11380ms 76.51% AbstractDynamicLinearPdeSolver::Solve 81ms 0.54% 0.56% 8925ms 60.00% AbstractCardiacTissue::SolveCellSystems 97ms 0.65% 1.22% 5388ms 36.22% AbstractCardiacCell::ComputeExceptVoltage 100ms 0.67% 1.89% 4686ms 31.50% AbstractOneStepIvpOdeSolver::InternalSolve 160ms 1.08% 2.96% 4059ms 27.29% EulerIvpOdeSolver::CalculateNextYValue 826ms 5.55% 8.52% 3860ms 25.95% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1708ms 11.48% 20.00% 3550ms 23.87% __GI___exp 0 0% 20.00% 3346ms 22.50% MonodomainProblem::WriteOneStep 1ms 0.0067% 20.01% 3196ms 21.49% H5Dwrite 2ms 0.013% 20.02% 3183ms 21.40% Hdf5DataWriter::PutVector 2ms 0.013% 20.03% 3162ms 21.26% H5D__write 123ms 0.83% 20.86% 2833ms 19.05% AbstractCardiacTissue::UpdateCaches (inline) 812ms 5.46% 26.32% 2637ms 17.73% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.32% 1922ms 12.92% H5D__chunk_collective_write 15ms 0.1% 26.42% 1922ms 12.92% H5F_set_coll_metadata_reads 1451ms 9.76% 36.18% 1746ms 11.74% __ieee754_exp_fma 9ms 0.061% 36.24% 1730ms 11.63% H5FD_s3comms_uriencode 1ms 0.0067% 36.24% 1676ms 11.27% LinearSystem::Solve 0 0% 36.24% 1540ms 10.35% KSPSolve 3ms 0.02% 36.26% 1540ms 10.35% KSPSolve_Private 4ms 0.027% 36.29% 1527ms 10.27% KSPSolve_CG 55ms 0.37% 36.66% 1422ms 9.56% 3ms 0.02% 36.68% 1412ms 9.49% H5F_block_write 1ms 0.0067% 36.69% 1409ms 9.47% H5PB_write 1ms 0.0067% 36.69% 1408ms 9.47% H5F__accum_write 0 0% 36.69% 1407ms 9.46% H5FD_write 3ms 0.02% 36.72% 1306ms 8.78% H5D__mpio_select_write 0 0% 36.72% 1187ms 7.98% PMPI_File_write_at_all 1158ms 7.79% 44.50% 1162ms 7.81% __GI_pwritev64 10ms 0.067% 44.57% 1115ms 7.50% H5D__chunk_cacheable 4ms 0.027% 44.59% 1006ms 6.76% std::pow (inline) 93ms 0.63% 45.22% 1002ms 6.74% __pow 367ms 2.47% 47.69% 962ms 6.47% H5S_select_iterate 86ms 0.58% 48.27% 906ms 6.09% __ieee754_pow_fma 5ms 0.034% 48.30% 881ms 5.92% PCApply 0 0% 48.30% 876ms 5.89% PCApply_BJacobi_Singleblock 1ms 0.0067% 48.31% 855ms 5.75% KSPSolve_PREONLY 1ms 0.0067% 48.31% 849ms 5.71% PCApply_ICC 3ms 0.02% 48.33% 848ms 5.70% MatSolve 835ms 5.61% 53.95% 845ms 5.68% MatSolve_SeqSBAIJ_1_NaturalOrdering 381ms 2.56% 56.51% 759ms 5.10% MonodomainSolver::SetupLinearSystem 0 0% 56.51% 666ms 4.48% KSP_PCApply.lto_priv.7 73ms 0.49% 57.00% 607ms 4.08% H5D__chunk_set_sizes 1ms 0.0067% 57.01% 579ms 3.89% MatMult 577ms 3.88% 60.88% 578ms 3.89% MatMult_SeqAIJ 458ms 3.08% 63.96% 458ms 3.08% log_inline (inline) 224ms 1.51% 65.47% 442ms 2.97% CellLuoRudy1991FromCellML::VerifyStateVariables 61ms 0.41% 65.88% 406ms 2.73% H5S_mpio_space_type 324ms 2.18% 68.06% 333ms 2.24% exp_inline (inline) 2ms 0.013% 68.07% 279ms 1.88% KSPConvergedDefault 237ms 1.59% 69.67% 237ms 1.59% [libchaste_heart.so] 180ms 1.21% 70.88% 227ms 1.53% top12 (inline) 83ms 0.56% 71.43% 224ms 1.51% TimeStepper::TimeStepper 0 0% 71.43% 216ms 1.45% KSP_PCApply 48ms 0.32% 71.76% 201ms 1.35% AbstractCardiacCell::SetVoltage (partial-inline) 39ms 0.26% 72.02% 191ms 1.28% __GI___libc_malloc 159ms 1.07% 73.09% 190ms 1.28% _int_malloc 10ms 0.067% 73.15% 183ms 1.23% H5VM_chunk_index 34ms 0.23% 73.38% 179ms 1.20% __GI___libc_free 10ms 0.067% 73.45% 175ms 1.18% ompi_datatype_destroy 95ms 0.64% 74.09% 165ms 1.11% AbstractOneStepIvpOdeSolver::Solve 2ms 0.013% 74.10% 163ms 1.10% Hdf5DataWriter::PutUnlimitedVariable 5ms 0.034% 74.14% 163ms 1.10% MPI_Type_free 153ms 1.03% 75.16% 153ms 1.03% asuint64 (inline) 151ms 1.02% 76.18% 151ms 1.02% ddot_ 9ms 0.061% 76.24% 149ms 1.00% ompi_info_register_framework_params 37ms 0.25% 76.49% 146ms 0.98% ompi_datatype_release_args 57ms 0.38% 76.87% 145ms 0.97% _int_free 5ms 0.034% 76.91% 145ms 0.97% ompi_datatype_create 142ms 0.95% 77.86% 142ms 0.95% TimeStepper::CalculateNextTime 35ms 0.24% 78.10% 135ms 0.91% H5S_set_version 108ms 0.73% 78.82% 134ms 0.9% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 78.83% 130ms 0.87% PMPI_File_set_view 108ms 0.73% 79.55% 127ms 0.85% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 59ms 0.4% 79.95% 126ms 0.85% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 91ms 0.61% 80.56% 116ms 0.78% AbstractParameterisedSystem::GetAnyVariable 54ms 0.36% 80.93% 112ms 0.75% H5S_hyper_add_span_element 106ms 0.71% 81.64% 106ms 0.71% __ieee754_log_fma 2ms 0.013% 81.65% 103ms 0.69% VecDuplicate 1ms 0.0067% 81.66% 103ms 0.69% VecNorm 102ms 0.69% 82.35% 102ms 0.69% __memcpy_avx_unaligned_erms 6ms 0.04% 82.39% 101ms 0.68% VecDuplicate_MPI 36ms 0.24% 82.63% 100ms 0.67% H5VM_array_calc 100ms 0.67% 83.30% 100ms 0.67% [libm.so.6] 28ms 0.19% 83.49% 97ms 0.65% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 83.49% 96ms 0.65% VecTDot 0 0% 83.49% 96ms 0.65% VecTDot_Seq 0 0% 83.49% 96ms 0.65% VecXDot_Seq_Private.constprop.0 2ms 0.013% 83.50% 95ms 0.64% VecNorm_Seq 91ms 0.61% 84.11% 91ms 0.61% H5VM_array_offset_pre 90ms 0.61% 84.72% 90ms 0.61% std::isinf (inline) 1ms 0.0067% 84.73% 87ms 0.58% H5D__chunk_allocated 0 0% 84.73% 82ms 0.55% H5D__select_write 1ms 0.0067% 84.73% 82ms 0.55% H5Dgather 82ms 0.55% 85.28% 82ms 0.55% H5VM_chunk_index_scaled 0 0% 85.28% 81ms 0.54% H5D__contig_fill 1ms 0.0067% 85.29% 81ms 0.54% H5VM_opvv 24ms 0.16% 85.45% 81ms 0.54% __libc_calloc 1ms 0.0067% 85.46% 80ms 0.54% H5D__contig_write 0 0% 85.46% 78ms 0.52% std::vector::_M_assign_aux (inline) 0 0% 85.46% 78ms 0.52% std::vector::assign (inline) 45ms 0.3% 85.76% 77ms 0.52% TimeStepper::AdvanceOneTimeStep 1ms 0.0067% 85.77% 75ms 0.5% PMPI_Type_create_resized 2ms 0.013% 85.78% 75ms 0.5% opal_datatype_create_desc