File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 427ms, 87.68% of 487ms total Dropped 222 nodes (cum <= 2.44ms) flat flat% sum% cum cum% 0 0% 0% 477ms 97.95% __libc_start_call_main 0 0% 0% 477ms 97.95% __libc_start_main_impl 0 0% 0% 477ms 97.95% _start 0 0% 0% 474ms 97.33% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 474ms 97.33% CxxTest::TestRunner::runAllTests 0 0% 0% 474ms 97.33% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 474ms 97.33% main 0 0% 0% 432ms 88.71% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 88.50% CxxTest::RealTestDescription::run 0 0% 0% 431ms 88.50% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 88.50% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 88.50% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 87.68% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.27% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 393ms 80.70% LinearSystem::Solve 0 0% 0% 392ms 80.49% KSPSolve 0 0% 0% 392ms 80.49% KSPSolve_Private 0 0% 0% 389ms 79.88% KSPSolve_CG 0 0% 0% 219ms 44.97% KSP_PCApply.lto_priv.7 0 0% 0% 215ms 44.15% PCApply 0 0% 0% 213ms 43.74% PCApply_BJacobi_Singleblock 0 0% 0% 180ms 36.96% KSPSolve_PREONLY (partial-inline) 0 0% 0% 173ms 35.52% MatSolve 170ms 34.91% 34.91% 173ms 35.52% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.91% 173ms 35.52% PCApply_ICC 0 0% 34.91% 72ms 14.78% MatMult 0 0% 34.91% 72ms 14.78% MatMult_SeqAIJ 71ms 14.58% 49.49% 72ms 14.78% MatMult_SeqAIJ_Inode (inline) 69ms 14.17% 63.66% 69ms 14.17% ddot_ 0 0% 63.66% 41ms 8.42% VecTDot 0 0% 63.66% 41ms 8.42% VecTDot_Seq 0 0% 63.66% 41ms 8.42% VecXDot_Seq_Private.constprop.0 0 0% 63.66% 39ms 8.01% CxxTest::RealWorldDescription::setUp 0 0% 63.66% 39ms 8.01% PMPI_Init_thread 0 0% 63.66% 39ms 8.01% PetscInitialize 0 0% 63.66% 39ms 8.01% PetscSetup::setUpWorld 0 0% 63.66% 39ms 8.01% PetscSetupUtils::CommonSetup 0 0% 63.66% 39ms 8.01% PetscSetupUtils::InitialisePetsc 0 0% 63.66% 39ms 8.01% ompi_mpi_init 0 0% 63.66% 35ms 7.19% 1ms 0.21% 63.86% 30ms 6.16% VecNorm 0 0% 63.86% 29ms 5.95% VecNorm_Seq 0 0% 63.86% 27ms 5.54% AbstractCardiacTissue::SolveCellSystems 0 0% 63.86% 26ms 5.34% MatNullSpaceRemove 0 0% 63.86% 24ms 4.93% orte_init 0 0% 63.86% 21ms 4.31% VecMDot 21ms 4.31% 68.17% 21ms 4.31% VecMDot_Seq 0 0% 68.17% 21ms 4.31% VecMXDot_Private 1ms 0.21% 68.38% 19ms 3.90% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.38% 18ms 3.70% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.21% 68.58% 17ms 3.49% VecAYPX 3ms 0.62% 69.20% 16ms 3.29% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.20% 16ms 3.29% EulerIvpOdeSolver::CalculateNextYValue 16ms 3.29% 72.48% 16ms 3.29% VecAYPX_Seq 0 0% 72.48% 15ms 3.08% hwloc_topology_load 0 0% 72.48% 15ms 3.08% mca_base_framework_open 0 0% 72.48% 14ms 2.87% __GI__dl_catch_exception 0 0% 72.48% 14ms 2.87% _dl_catch_error 0 0% 72.48% 14ms 2.87% _dlerror_run 6ms 1.23% 73.72% 13ms 2.67% __GI___exp 0 0% 73.72% 13ms 2.67% ___dlopen 0 0% 73.72% 13ms 2.67% _dl_open 0 0% 73.72% 13ms 2.67% dl_open_worker 0 0% 73.72% 13ms 2.67% dlopen_doit 0 0% 73.72% 13ms 2.67% dlopen_implementation (inline) 1ms 0.21% 73.92% 13ms 2.67% hwloc_linux_get_tid_last_cpu_location 0 0% 73.92% 13ms 2.67% mca_base_framework_components_register 0 0% 73.92% 13ms 2.67% mca_base_framework_register 0 0% 73.92% 12ms 2.46% KSP_PCApply (partial-inline) 0 0% 73.92% 12ms 2.46% VecDuplicate 0 0% 73.92% 12ms 2.46% opal_stackframe_output 0 0% 73.92% 11ms 2.26% VecDuplicate_Seq 0 0% 73.92% 11ms 2.26% _dl_init 0 0% 73.92% 11ms 2.26% call_init (inline) 0 0% 73.92% 11ms 2.26% mca_base_component_find 0 0% 73.92% 11ms 2.26% mca_base_component_repository_open 0 0% 73.92% 10ms 2.05% dl_open_worker_begin 0 0% 73.92% 9ms 1.85% VecCreate 0 0% 73.92% 8ms 1.64% _dl_lookup_symbol_x 0 0% 73.92% 8ms 1.64% _dl_start_user 7ms 1.44% 75.36% 8ms 1.64% do_lookup_x 0 0% 75.36% 7ms 1.44% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 75.36% 7ms 1.44% CellLuoRudy1991FromCellML::GetIIonic 7ms 1.44% 76.80% 7ms 1.44% __ieee754_exp_fma 1ms 0.21% 77.00% 6ms 1.23% PetscHeaderCreate_Private 0 0% 77.00% 6ms 1.23% VecAXPY 0 0% 77.00% 6ms 1.23% VecAXPY_Seq 0 0% 77.00% 6ms 1.23% __ieee754_pow_fma 0 0% 77.00% 6ms 1.23% __pow 0 0% 77.00% 6ms 1.23% _dl_open_relocate_one_object (inline) 0 0% 77.00% 6ms 1.23% _dl_relocate_object 6ms 1.23% 78.23% 6ms 1.23% _int_malloc 1ms 0.21% 78.44% 6ms 1.23% boost::serialization::singleton::get_instance 6ms 1.23% 79.67% 6ms 1.23% daxpy_ 0 0% 79.67% 6ms 1.23% mca_base_framework_components_open 0 0% 79.67% 6ms 1.23% mca_topo_base_dist_graph_neighbors_count 0 0% 79.67% 6ms 1.23% std::pow (inline) 0 0% 79.67% 5ms 1.03% KSPConvergedDefault 1ms 0.21% 79.88% 5ms 1.03% PetscMallocA 0 0% 79.88% 5ms 1.03% PetscMemcpy (inline) 0 0% 79.88% 5ms 1.03% VecDestroy 0 0% 79.88% 5ms 1.03% VecMAXPY 5ms 1.03% 80.90% 5ms 1.03% VecMAXPY_Seq 0 0% 80.90% 5ms 1.03% __GI___libc_malloc 5ms 1.03% 81.93% 5ms 1.03% __memcpy_avx_unaligned_erms 2ms 0.41% 82.34% 5ms 1.03% _dl_fixup 0 0% 82.34% 5ms 1.03% _dl_runtime_resolve_xsavec 0 0% 82.34% 5ms 1.03% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.34% 5ms 1.03% elf_dynamic_do_Rela (inline) 0 0% 82.34% 5ms 1.03% elf_machine_rela (inline) 0 0% 82.34% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 82.34% 5ms 1.03% orte_ess_base_proc_binding 0 0% 82.34% 5ms 1.03% resolve_map (inline) 0 0% 82.34% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 82.34% 4ms 0.82% BidomainSolver::SetupLinearSystem 0 0% 82.34% 4ms 0.82% PetscMallocAlign (partial-inline) 0 0% 82.34% 4ms 0.82% PetscMemzero (inline) 1ms 0.21% 82.55% 4ms 0.82% __cxa_finalize 4ms 0.82% 83.37% 4ms 0.82% __memset_avx2_unaligned_erms 0 0% 83.37% 4ms 0.82% _dl_call_fini 0 0% 83.37% 4ms 0.82% _dl_map_object 4ms 0.82% 84.19% 4ms 0.82% log_inline (inline) 0 0% 84.19% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 84.19% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.21% 84.39% 3ms 0.62% PetscCommDuplicate 0 0% 84.39% 3ms 0.62% PetscFinalize 0 0% 84.39% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 84.39% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 84.39% 3ms 0.62% VecCreate_Seq 0 0% 84.39% 3ms 0.62% VecSetType 0 0% 84.39% 3ms 0.62% XOpenDisplay 0 0% 84.39% 3ms 0.62% [hwloc_gl.so] 0 0% 84.39% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 84.39% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.39% 3ms 0.62% _XConnectXCB 3ms 0.62% 85.01% 3ms 0.62% __GI___clock_nanosleep 0 0% 85.01% 3ms 0.62% __GI___libc_free 3ms 0.62% 85.63% 3ms 0.62% __GI___libc_write 0 0% 85.63% 3ms 0.62% __GI___nanosleep 0 0% 85.63% 3ms 0.62% __GI_exit 0 0% 85.63% 3ms 0.62% ___asprintf_chk 2ms 0.41% 86.04% 3ms 0.62% __printf_buffer 0 0% 86.04% 3ms 0.62% __run_exit_handlers 3ms 0.62% 86.65% 3ms 0.62% __strcmp_avx2 3ms 0.62% 87.27% 3ms 0.62% __strlen_avx2 0 0% 87.27% 3ms 0.62% __vasprintf_internal 0 0% 87.27% 3ms 0.62% _dl_fini 0 0% 87.27% 3ms 0.62% _dl_map_object_from_fd 1ms 0.21% 87.47% 3ms 0.62% _int_free 0 0% 87.47% 3ms 0.62% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 1ms 0.21% 87.68% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.68% 3ms 0.62% mca_base_components_close 0 0% 87.68% 3ms 0.62% mca_base_framework_close 0 0% 87.68% 3ms 0.62% mca_base_var_group_register 0 0% 87.68% 3ms 0.62% mca_base_var_register 0 0% 87.68% 3ms 0.62% ompi_mpi_finalize 0 0% 87.68% 3ms 0.62% operator new 0 0% 87.68% 3ms 0.62% std::ostream::flush 0 0% 87.68% 3ms 0.62% usleep 0 0% 87.68% 3ms 0.62% xcb_connect_to_display_with_auth_info