File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 120562ms, 91.79% of 131348ms total Dropped 1146 nodes (cum <= 656.74ms) flat flat% sum% cum cum% 0 0% 0% 131331ms 100% __libc_start_call_main 0 0% 0% 131331ms 100% __libc_start_main_impl 0 0% 0% 131331ms 100% _start 0 0% 0% 131328ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 131328ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 131328ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 131328ms 100% main 0 0% 0% 131291ms 100% AbstractConvergenceTester::Converge 0 0% 0% 131291ms 100% CxxTest::RealTestDescription::run 0 0% 0% 131291ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 131291ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 131291ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 131291ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0023% 0.0023% 130095ms 99.05% AbstractCardiacProblem::Solve 8ms 0.0061% 0.0084% 129268ms 98.42% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0069% 0.015% 71423ms 54.38% LinearSystem::Solve 0 0% 0.015% 70848ms 53.94% KSPSolve 11ms 0.0084% 0.024% 70848ms 53.94% KSPSolve_Private 8ms 0.0061% 0.03% 70494ms 53.67% KSPSolve_SYMMLQ 468ms 0.36% 0.39% 48166ms 36.67% AbstractCardiacTissue::SolveCellSystems 5ms 0.0038% 0.39% 40121ms 30.55% PCApply 3ms 0.0023% 0.39% 40105ms 30.53% PCApply_BJacobi_Singleblock 0 0% 0.39% 37688ms 28.69% KSPSolve_PREONLY (partial-inline) 970ms 0.74% 1.13% 37671ms 28.68% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00076% 1.13% 36586ms 27.85% PCApply_ICC 4ms 0.003% 1.13% 36585ms 27.85% MatSolve 36145ms 27.52% 28.65% 36581ms 27.85% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.003% 28.66% 34417ms 26.20% KSP_PCApply.lto_priv.18 7629ms 5.81% 34.46% 33483ms 25.49% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 16ms 0.012% 34.48% 25039ms 19.06% MatMult 249ms 0.19% 34.67% 25023ms 19.05% MatMult_SeqAIJ (partial-inline) 24496ms 18.65% 53.32% 25021ms 19.05% MatMult_SeqAIJ_Inode (inline) 2281ms 1.74% 55.05% 17093ms 13.01% CardiacNewtonSolver::Solve 5724ms 4.36% 59.41% 10273ms 7.82% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1456ms 1.11% 60.52% 10046ms 7.65% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 194ms 0.15% 60.67% 9054ms 6.89% AbstractCardiacTissue::UpdateCaches (inline) 1663ms 1.27% 61.93% 8472ms 6.45% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1214ms 0.92% 62.86% 8469ms 6.45% BidomainSolver::SetupLinearSystem 8319ms 6.33% 69.19% 8319ms 6.33% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00076% 69.19% 7544ms 5.74% KSP_PCApply (partial-inline) 7ms 0.0053% 69.20% 7064ms 5.38% KSPConvergedDefault 4273ms 3.25% 72.45% 4367ms 3.32% __ieee754_log_fma 0 0% 72.45% 4092ms 3.12% boost::numeric::ublas::norm_inf (inline) 2846ms 2.17% 74.62% 4092ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.62% 4092ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.62% 4092ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3555ms 2.71% 77.32% 3555ms 2.71% ddot_ 8ms 0.0061% 77.33% 3230ms 2.46% MatNullSpaceRemove 31ms 0.024% 77.35% 3081ms 2.35% std::pow (inline) 427ms 0.33% 77.68% 3041ms 2.32% __pow 1945ms 1.48% 79.16% 3013ms 2.29% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 7ms 0.0053% 79.16% 2942ms 2.24% VecDot 0 0% 79.16% 2935ms 2.23% VecDot_Seq 0 0% 79.16% 2935ms 2.23% VecXDot_Seq_Private.constprop.0 2786ms 2.12% 81.28% 2786ms 2.12% __memcpy_avx_unaligned_erms 0 0% 81.28% 2745ms 2.09% PetscMemcpy (inline) 346ms 0.26% 81.55% 2584ms 1.97% __ieee754_pow_fma 17ms 0.013% 81.56% 2332ms 1.78% VecCopy 4ms 0.003% 81.56% 2312ms 1.76% VecCopy_Seq (partial-inline) 10ms 0.0076% 81.57% 2145ms 1.63% VecAXPY 2ms 0.0015% 81.57% 2135ms 1.63% VecAXPY_Seq 2123ms 1.62% 83.19% 2123ms 1.62% daxpy_ 5ms 0.0038% 83.19% 2081ms 1.58% VecMDot 13ms 0.0099% 83.20% 2076ms 1.58% VecMXDot_Private 2050ms 1.56% 84.76% 2055ms 1.56% VecMDot_Seq 1ms 0.00076% 84.76% 2004ms 1.53% AbstractFeVolumeIntegralAssembler::DoAssemble 28ms 0.021% 84.79% 1669ms 1.27% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1521ms 1.16% 85.94% 1572ms 1.20% exp_inline (inline) 0 0% 85.94% 1383ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.94% 1233ms 0.94% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.94% 1233ms 0.94% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.94% 1233ms 0.94% boost_numeric_ublas_abs (inline) 1233ms 0.94% 86.88% 1233ms 0.94% std::abs (inline) 6ms 0.0046% 86.89% 1141ms 0.87% VecMAXPY 1128ms 0.86% 87.75% 1135ms 0.86% VecMAXPY_Seq 3ms 0.0023% 87.75% 1107ms 0.84% boost::numeric::ublas::matrix_assign (inline) 246ms 0.19% 87.94% 1096ms 0.83% boost::numeric::ublas::indexing_matrix_assign 651ms 0.5% 88.43% 1055ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.43% 1025ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.43% 1025ms 0.78% CuboidMeshConstructor::Construct 0 0% 88.43% 1025ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 1009ms 0.77% 89.20% 1009ms 0.77% [libchaste_heart.so] 3ms 0.0023% 89.20% 930ms 0.71% VecNorm 3ms 0.0023% 89.20% 921ms 0.7% VecNorm_Seq 3ms 0.0023% 89.21% 918ms 0.7% Element::Element 10ms 0.0076% 89.21% 900ms 0.69% BidomainAssembler::ComputeMatrixTerm 3ms 0.0023% 89.22% 892ms 0.68% AbstractTetrahedralElement::CalculateJacobian 8ms 0.0061% 89.22% 876ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0023% 89.22% 868ms 0.66% AbstractBidomainSolver::FinaliseLinearSystem 2ms 0.0015% 89.23% 867ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 196ms 0.15% 89.38% 861ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 849ms 0.65% 90.02% 849ms 0.65% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 9ms 0.0069% 90.03% 832ms 0.63% VecScale 1ms 0.00076% 90.03% 823ms 0.63% VecScale_Seq 819ms 0.62% 90.65% 819ms 0.62% dscal_ 812ms 0.62% 91.27% 812ms 0.62% __memset_avx2_unaligned_erms 0 0% 91.27% 799ms 0.61% PetscMemzero (inline) 1ms 0.00076% 91.27% 763ms 0.58% BidomainProblem::WriteOneStep 0 0% 91.27% 730ms 0.56% VecDuplicate 678ms 0.52% 91.79% 678ms 0.52% DistributedVector::Iterator::operator!=