File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119748ms, 90.97% of 131640ms total Dropped 1178 nodes (cum <= 658.20ms) flat flat% sum% cum cum% 0 0% 0% 131627ms 100% __libc_start_call_main 0 0% 0% 131627ms 100% __libc_start_main_impl 0 0% 0% 131627ms 100% _start 0 0% 0% 131623ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 131623ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 131623ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 131623ms 100% main 0 0% 0% 131585ms 100% AbstractConvergenceTester::Converge 0 0% 0% 131585ms 100% CxxTest::RealTestDescription::run 0 0% 0% 131585ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 131585ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 131585ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 131585ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.003% 0.003% 130392ms 99.05% AbstractCardiacProblem::Solve 9ms 0.0068% 0.0099% 129517ms 98.39% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0038% 0.014% 72216ms 54.86% LinearSystem::Solve 4ms 0.003% 0.017% 71686ms 54.46% KSPSolve 9ms 0.0068% 0.024% 71684ms 54.45% KSPSolve_Private 22ms 0.017% 0.04% 71268ms 54.14% KSPSolve_SYMMLQ 659ms 0.5% 0.54% 47603ms 36.16% AbstractCardiacTissue::SolveCellSystems 9ms 0.0068% 0.55% 40043ms 30.42% PCApply 5ms 0.0038% 0.55% 40014ms 30.40% PCApply_BJacobi_Singleblock 3ms 0.0023% 0.55% 37515ms 28.50% KSPSolve_PREONLY (partial-inline) 1182ms 0.9% 1.45% 37040ms 28.14% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0023% 1.45% 36435ms 27.68% PCApply_ICC 12ms 0.0091% 1.46% 36432ms 27.68% MatSolve 35994ms 27.34% 28.81% 36420ms 27.67% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00076% 28.81% 34317ms 26.07% KSP_PCApply.lto_priv.18 7732ms 5.87% 34.68% 32519ms 24.70% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 12ms 0.0091% 34.69% 25098ms 19.07% MatMult 538ms 0.41% 35.10% 25086ms 19.06% MatMult_SeqAIJ (partial-inline) 24339ms 18.49% 53.59% 24858ms 18.88% MatMult_SeqAIJ_Inode (inline) 2228ms 1.69% 55.28% 16961ms 12.88% CardiacNewtonSolver::Solve 5594ms 4.25% 59.53% 10126ms 7.69% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1312ms 1% 60.53% 9397ms 7.14% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 215ms 0.16% 60.69% 8885ms 6.75% AbstractCardiacTissue::UpdateCaches (inline) 1249ms 0.95% 61.64% 8523ms 6.47% BidomainSolver::SetupLinearSystem 1634ms 1.24% 62.88% 8287ms 6.30% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7782ms 5.91% 68.79% 7782ms 5.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.79% 7529ms 5.72% KSP_PCApply (partial-inline) 8ms 0.0061% 68.80% 7011ms 5.33% KSPConvergedDefault 4225ms 3.21% 72.01% 4322ms 3.28% __ieee754_log_fma 0 0% 72.01% 4182ms 3.18% boost::numeric::ublas::norm_inf (inline) 2855ms 2.17% 74.18% 4182ms 3.18% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.18% 4182ms 3.18% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.18% 4182ms 3.18% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3505ms 2.66% 76.84% 3505ms 2.66% __memcpy_avx_unaligned_erms 0 0% 76.84% 3461ms 2.63% PetscMemcpy (inline) 3277ms 2.49% 79.33% 3277ms 2.49% ddot_ 8ms 0.0061% 79.33% 3200ms 2.43% MatNullSpaceRemove 24ms 0.018% 79.35% 3178ms 2.41% std::pow (inline) 2045ms 1.55% 80.90% 3159ms 2.40% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 433ms 0.33% 81.23% 3129ms 2.38% __pow 19ms 0.014% 81.25% 3060ms 2.32% VecCopy 0 0% 81.25% 3037ms 2.31% VecCopy_Seq (partial-inline) 10ms 0.0076% 81.26% 2728ms 2.07% VecDot 1ms 0.00076% 81.26% 2718ms 2.06% VecDot_Seq 4ms 0.003% 81.26% 2717ms 2.06% VecXDot_Seq_Private.constprop.0 382ms 0.29% 81.55% 2670ms 2.03% __ieee754_pow_fma 19ms 0.014% 81.56% 2429ms 1.85% VecAXPY 6ms 0.0046% 81.57% 2410ms 1.83% VecAXPY_Seq 2380ms 1.81% 83.38% 2380ms 1.81% daxpy_ 2ms 0.0015% 83.38% 2072ms 1.57% VecMDot 9ms 0.0068% 83.38% 2070ms 1.57% VecMXDot_Private 1ms 0.00076% 83.39% 2063ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 2044ms 1.55% 84.94% 2057ms 1.56% VecMDot_Seq 32ms 0.024% 84.96% 1728ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1534ms 1.17% 86.13% 1587ms 1.21% exp_inline (inline) 0 0% 86.13% 1407ms 1.07% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.13% 1315ms 1% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.13% 1315ms 1% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.13% 1315ms 1% boost_numeric_ublas_abs (inline) 1315ms 1% 87.13% 1315ms 1% std::abs (inline) 8ms 0.0061% 87.13% 1120ms 0.85% VecMAXPY 13ms 0.0099% 87.14% 1116ms 0.85% boost::numeric::ublas::matrix_assign (inline) 1105ms 0.84% 87.98% 1112ms 0.84% VecMAXPY_Seq 239ms 0.18% 88.16% 1096ms 0.83% boost::numeric::ublas::indexing_matrix_assign 691ms 0.52% 88.69% 1037ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.69% 1009ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.69% 1009ms 0.77% CuboidMeshConstructor::Construct 0 0% 88.69% 1009ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 978ms 0.74% 89.43% 978ms 0.74% [libchaste_heart.so] 0 0% 89.43% 899ms 0.68% Element::Element 896ms 0.68% 90.11% 896ms 0.68% __memset_avx2_unaligned_erms 7ms 0.0053% 90.12% 885ms 0.67% VecScale 5ms 0.0038% 90.12% 884ms 0.67% AbstractTetrahedralElement::CalculateJacobian 0 0% 90.12% 884ms 0.67% PetscMemzero (inline) 2ms 0.0015% 90.12% 878ms 0.67% VecScale_Seq 872ms 0.66% 90.79% 872ms 0.66% dscal_ 0 0% 90.79% 867ms 0.66% VecNorm 2ms 0.0015% 90.79% 858ms 0.65% VecNorm_Seq 7ms 0.0053% 90.79% 840ms 0.64% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 90.79% 825ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 4ms 0.003% 90.80% 821ms 0.62% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00076% 90.80% 817ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 216ms 0.16% 90.96% 812ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00076% 90.96% 807ms 0.61% BidomainProblem::WriteOneStep 5ms 0.0038% 90.97% 802ms 0.61% VecDuplicate