File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12845ms, 85.43% of 15036ms total Dropped 752 nodes (cum <= 75.18ms) flat flat% sum% cum cum% 0 0% 0% 15026ms 99.93% __libc_start_call_main 0 0% 0% 15026ms 99.93% __libc_start_main_impl 0 0% 0% 15026ms 99.93% _start 0 0% 0% 15022ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15022ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15022ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15022ms 99.91% main 0 0% 0% 14988ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14988ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14988ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14966ms 99.53% AbstractCardiacProblem::Solve 2ms 0.013% 0.02% 11393ms 75.77% AbstractDynamicLinearPdeSolver::Solve 149ms 0.99% 1.01% 9004ms 59.88% AbstractCardiacTissue::SolveCellSystems 108ms 0.72% 1.73% 5248ms 34.90% AbstractCardiacCell::ComputeExceptVoltage 118ms 0.78% 2.51% 4596ms 30.57% AbstractOneStepIvpOdeSolver::InternalSolve 158ms 1.05% 3.56% 3919ms 26.06% EulerIvpOdeSolver::CalculateNextYValue 779ms 5.18% 8.75% 3727ms 24.79% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 8.75% 3510ms 23.34% MonodomainProblem::WriteOneStep 1797ms 11.95% 20.70% 3491ms 23.22% __GI___exp 4ms 0.027% 20.72% 3355ms 22.31% Hdf5DataWriter::PutVector 1ms 0.0067% 20.73% 3343ms 22.23% H5Dwrite 2ms 0.013% 20.74% 3305ms 21.98% H5D__write 154ms 1.02% 21.77% 2900ms 19.29% AbstractCardiacTissue::UpdateCaches (inline) 793ms 5.27% 27.04% 2676ms 17.80% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.05% 1925ms 12.80% H5D__chunk_collective_write 16ms 0.11% 27.15% 1924ms 12.80% H5F_set_coll_metadata_reads 15ms 0.1% 27.25% 1669ms 11.10% H5FD_s3comms_uriencode 1327ms 8.83% 36.08% 1640ms 10.91% __ieee754_exp_fma 3ms 0.02% 36.10% 1530ms 10.18% LinearSystem::Solve 0 0% 36.10% 1419ms 9.44% KSPSolve 6ms 0.04% 36.14% 1419ms 9.44% KSPSolve_Private 2ms 0.013% 36.15% 1410ms 9.38% KSPSolve_CG 59ms 0.39% 36.55% 1266ms 8.42% 11ms 0.073% 36.62% 1256ms 8.35% H5D__chunk_cacheable 3ms 0.02% 36.64% 1255ms 8.35% H5F_block_write 1ms 0.0067% 36.65% 1252ms 8.33% H5PB_write 1ms 0.0067% 36.65% 1251ms 8.32% H5F__accum_write 1ms 0.0067% 36.66% 1250ms 8.31% H5FD_write 0 0% 36.66% 1158ms 7.70% H5D__mpio_select_write 355ms 2.36% 39.02% 1098ms 7.30% H5S_select_iterate 0 0% 39.02% 1051ms 6.99% PMPI_File_write_at_all 1022ms 6.80% 45.82% 1023ms 6.80% __GI_pwritev64 12ms 0.08% 45.90% 1016ms 6.76% std::pow (inline) 106ms 0.7% 46.60% 1004ms 6.68% __pow 87ms 0.58% 47.18% 897ms 5.97% __ieee754_pow_fma 387ms 2.57% 49.75% 835ms 5.55% MonodomainSolver::SetupLinearSystem 82ms 0.55% 50.30% 749ms 4.98% H5D__chunk_set_sizes 4ms 0.027% 50.33% 741ms 4.93% PCApply 0 0% 50.33% 737ms 4.90% PCApply_BJacobi_Singleblock 0 0% 50.33% 703ms 4.68% KSPSolve_PREONLY 1ms 0.0067% 50.33% 699ms 4.65% PCApply_ICC 1ms 0.0067% 50.34% 698ms 4.64% MatSolve 691ms 4.60% 54.93% 697ms 4.64% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 54.95% 623ms 4.14% MatMult 620ms 4.12% 59.08% 620ms 4.12% MatMult_SeqAIJ 74ms 0.49% 59.57% 525ms 3.49% H5S_mpio_space_type 0 0% 59.57% 482ms 3.21% KSP_PCApply.lto_priv.7 203ms 1.35% 60.92% 461ms 3.07% CellLuoRudy1991FromCellML::VerifyStateVariables 457ms 3.04% 63.96% 457ms 3.04% log_inline (inline) 2ms 0.013% 63.97% 331ms 2.20% KSPConvergedDefault 312ms 2.08% 66.05% 322ms 2.14% exp_inline (inline) 116ms 0.77% 66.82% 263ms 1.75% TimeStepper::TimeStepper 210ms 1.40% 68.22% 262ms 1.74% top12 (inline) 0 0% 68.22% 260ms 1.73% KSP_PCApply 249ms 1.66% 69.87% 249ms 1.66% [libchaste_heart.so] 16ms 0.11% 69.98% 247ms 1.64% H5VM_chunk_index 56ms 0.37% 70.35% 219ms 1.46% __GI___libc_malloc 188ms 1.25% 71.60% 217ms 1.44% _int_malloc 12ms 0.08% 71.68% 203ms 1.35% ompi_datatype_destroy 6ms 0.04% 71.72% 198ms 1.32% MPI_Type_free 52ms 0.35% 72.07% 194ms 1.29% AbstractCardiacCell::SetVoltage (partial-inline) 23ms 0.15% 72.22% 192ms 1.28% __GI___libc_free 10ms 0.067% 72.29% 181ms 1.20% ompi_datatype_create 5ms 0.033% 72.32% 172ms 1.14% ompi_info_register_framework_params 42ms 0.28% 72.60% 171ms 1.14% ompi_datatype_release_args 67ms 0.45% 73.04% 167ms 1.11% _int_free 35ms 0.23% 73.28% 163ms 1.08% H5S_set_version 0 0% 73.28% 154ms 1.02% Hdf5DataWriter::PutUnlimitedVariable 154ms 1.02% 74.30% 154ms 1.02% ddot_ 110ms 0.73% 75.03% 151ms 1.00% AbstractOneStepIvpOdeSolver::Solve 146ms 0.97% 76.00% 146ms 0.97% TimeStepper::CalculateNextTime 145ms 0.96% 76.97% 145ms 0.96% asuint64 (inline) 68ms 0.45% 77.42% 138ms 0.92% H5S_hyper_add_span_element 55ms 0.37% 77.79% 130ms 0.86% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 59ms 0.39% 78.18% 128ms 0.85% H5VM_array_calc 105ms 0.7% 78.88% 124ms 0.82% AbstractParameterisedSystem::SetAnyVariable 124ms 0.82% 79.70% 124ms 0.82% __memcpy_avx_unaligned_erms 0 0% 79.70% 123ms 0.82% PMPI_File_set_view 120ms 0.8% 80.50% 120ms 0.8% H5VM_chunk_index_scaled 103ms 0.69% 81.19% 119ms 0.79% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 118ms 0.78% 81.97% 119ms 0.79% __ieee754_log_fma 112ms 0.74% 82.71% 112ms 0.74% H5VM_array_offset_pre 111ms 0.74% 83.45% 111ms 0.74% std::isinf (inline) 3ms 0.02% 83.47% 103ms 0.69% VecNorm 23ms 0.15% 83.63% 98ms 0.65% __libc_calloc 74ms 0.49% 84.12% 97ms 0.65% AbstractParameterisedSystem::GetAnyVariable 2ms 0.013% 84.13% 96ms 0.64% PMPI_Type_create_resized 34ms 0.23% 84.36% 95ms 0.63% ompi_datatype_set_args 1ms 0.0067% 84.36% 93ms 0.62% VecTDot 2ms 0.013% 84.38% 91ms 0.61% VecNorm_Seq 0 0% 84.38% 91ms 0.61% VecTDot_Seq 0 0% 84.38% 91ms 0.61% VecXDot_Seq_Private.constprop.0 3ms 0.02% 84.40% 90ms 0.6% ompi_datatype_duplicate 0 0% 84.40% 86ms 0.57% VecDuplicate 1ms 0.0067% 84.40% 86ms 0.57% VecDuplicate_MPI 6ms 0.04% 84.44% 86ms 0.57% opal_datatype_create_desc 16ms 0.11% 84.55% 85ms 0.57% opal_dss_print_buffer_contents 0 0% 84.55% 85ms 0.57% std::vector::_M_assign_aux (inline) 0 0% 84.55% 85ms 0.57% std::vector::assign (inline) 6ms 0.04% 84.59% 84ms 0.56% PMPI_Type_vector 5ms 0.033% 84.62% 83ms 0.55% MPI_Type_create_hindexed 2ms 0.013% 84.64% 79ms 0.53% H5D__chunk_allocated 43ms 0.29% 84.92% 78ms 0.52% H5SL_search 76ms 0.51% 85.43% 76ms 0.51% ReplicatableVector::operator[]