File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 417ms, 87.06% of 479ms total Dropped 201 nodes (cum <= 2.40ms) flat flat% sum% cum cum% 0 0% 0% 470ms 98.12% __libc_start_call_main 0 0% 0% 470ms 98.12% __libc_start_main_impl 0 0% 0% 470ms 98.12% _start 0 0% 0% 467ms 97.49% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 467ms 97.49% CxxTest::TestRunner::runAllTests 0 0% 0% 467ms 97.49% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 467ms 97.49% main 0 0% 0% 431ms 89.98% CxxTest::RealTestDescription::run 0 0% 0% 431ms 89.98% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 89.98% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 89.98% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 89.98% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 89.14% AbstractCardiacProblem::Solve 0 0% 0% 426ms 88.94% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 386ms 80.58% LinearSystem::Solve 0 0% 0% 384ms 80.17% KSPSolve 1ms 0.21% 0.21% 384ms 80.17% KSPSolve_CG 0 0% 0.21% 384ms 80.17% KSPSolve_Private 0 0% 0.21% 239ms 49.90% KSP_PCApply.lto_priv.7 0 0% 0.21% 229ms 47.81% PCApply 0 0% 0.21% 228ms 47.60% PCApply_BJacobi_Singleblock 0 0% 0.21% 199ms 41.54% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 190ms 39.67% MatSolve 187ms 39.04% 39.25% 190ms 39.67% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 39.25% 190ms 39.67% PCApply_ICC 0 0% 39.25% 71ms 14.82% MatMult 0 0% 39.25% 71ms 14.82% MatMult_SeqAIJ 71ms 14.82% 54.07% 71ms 14.82% MatMult_SeqAIJ_Inode (inline) 51ms 10.65% 64.72% 51ms 10.65% ddot_ 0 0% 64.72% 33ms 6.89% CxxTest::RealWorldDescription::setUp 0 0% 64.72% 33ms 6.89% PMPI_Init_thread 0 0% 64.72% 33ms 6.89% PetscInitialize 0 0% 64.72% 33ms 6.89% PetscSetup::setUpWorld 0 0% 64.72% 33ms 6.89% PetscSetupUtils::CommonSetup 0 0% 64.72% 33ms 6.89% PetscSetupUtils::InitialisePetsc 0 0% 64.72% 33ms 6.89% ompi_mpi_init 1ms 0.21% 64.93% 32ms 6.68% AbstractCardiacTissue::SolveCellSystems 2ms 0.42% 65.34% 32ms 6.68% MatNullSpaceRemove 0 0% 65.34% 31ms 6.47% VecTDot 0 0% 65.34% 31ms 6.47% VecTDot_Seq 0 0% 65.34% 31ms 6.47% VecXDot_Seq_Private.constprop.0 1ms 0.21% 65.55% 28ms 5.85% 0 0% 65.55% 22ms 4.59% orte_init 0 0% 65.55% 20ms 4.18% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.55% 20ms 4.18% VecMDot 1ms 0.21% 65.76% 20ms 4.18% VecMXDot_Private 0 0% 65.76% 20ms 4.18% VecNorm 0 0% 65.76% 20ms 4.18% VecNorm_Seq 19ms 3.97% 69.73% 19ms 3.97% VecMDot_Seq 0 0% 69.73% 17ms 3.55% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.21% 69.94% 16ms 3.34% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.21% 70.15% 15ms 3.13% CellLuoRudy1991FromCellML::EvaluateYDerivatives 7ms 1.46% 71.61% 15ms 3.13% __GI___exp 0 0% 71.61% 14ms 2.92% __GI__dl_catch_exception 0 0% 71.61% 14ms 2.92% _dl_catch_error 0 0% 71.61% 14ms 2.92% _dlerror_run 0 0% 71.61% 14ms 2.92% hwloc_topology_load 0 0% 71.61% 14ms 2.92% mca_base_framework_open 0 0% 71.61% 13ms 2.71% hwloc_linux_get_tid_last_cpu_location 0 0% 71.61% 12ms 2.51% mca_base_framework_components_register 0 0% 71.61% 12ms 2.51% mca_base_framework_register 0 0% 71.61% 12ms 2.51% opal_stackframe_output 0 0% 71.61% 11ms 2.30% VecAYPX 11ms 2.30% 73.90% 11ms 2.30% VecAYPX_Seq 0 0% 73.90% 11ms 2.30% ___dlopen 0 0% 73.90% 11ms 2.30% _dl_open 0 0% 73.90% 11ms 2.30% dl_open_worker 0 0% 73.90% 11ms 2.30% dlopen_doit 0 0% 73.90% 11ms 2.30% dlopen_implementation (inline) 0 0% 73.90% 10ms 2.09% KSP_PCApply (partial-inline) 0 0% 73.90% 10ms 2.09% VecAXPY 2ms 0.42% 74.32% 10ms 2.09% VecAXPY_Seq 0 0% 74.32% 10ms 2.09% VecDuplicate 0 0% 74.32% 10ms 2.09% VecMAXPY 10ms 2.09% 76.41% 10ms 2.09% VecMAXPY_Seq 0 0% 76.41% 10ms 2.09% dl_open_worker_begin 0 0% 76.41% 9ms 1.88% VecDuplicate_Seq 0 0% 76.41% 9ms 1.88% _dl_init 0 0% 76.41% 9ms 1.88% call_init (inline) 0 0% 76.41% 9ms 1.88% mca_base_component_find 0 0% 76.41% 9ms 1.88% mca_base_component_repository_open 5ms 1.04% 77.45% 8ms 1.67% __ieee754_exp_fma 0 0% 77.45% 8ms 1.67% _dl_start_user 1ms 0.21% 77.66% 7ms 1.46% BidomainSolver::SetupLinearSystem 0 0% 77.66% 7ms 1.46% _dl_map_object 0 0% 77.66% 7ms 1.46% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.21% 77.87% 7ms 1.46% boost::serialization::singleton::get_instance 7ms 1.46% 79.33% 7ms 1.46% daxpy_ 0 0% 79.33% 6ms 1.25% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.21% 79.54% 6ms 1.25% CellLuoRudy1991FromCellML::GetIIonic 0 0% 79.54% 6ms 1.25% PetscMallocA 1ms 0.21% 79.75% 6ms 1.25% PetscMallocAlign (partial-inline) 0 0% 79.75% 5ms 1.04% PetscMemzero (inline) 5ms 1.04% 80.79% 5ms 1.04% __GI___libc_read 5ms 1.04% 81.84% 5ms 1.04% __memset_avx2_unaligned_erms 1ms 0.21% 82.05% 5ms 1.04% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 82.05% 5ms 1.04% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 82.05% 5ms 1.04% opal_hwloc_base_get_topology 0 0% 82.05% 5ms 1.04% orte_ess_base_proc_binding 0 0% 82.05% 4ms 0.84% AbstractCardiacProblem::Initialise 3ms 0.63% 82.67% 4ms 0.84% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.21% 82.88% 4ms 0.84% KSPConvergedDefault 0 0% 82.88% 4ms 0.84% PetscMemcpy (inline) 1ms 0.21% 83.09% 4ms 0.84% VecCreate 0 0% 83.09% 4ms 0.84% VecDestroy 0 0% 83.09% 4ms 0.84% VecSetType 1ms 0.21% 83.30% 4ms 0.84% __cxa_finalize 4ms 0.84% 84.13% 4ms 0.84% __memcpy_avx_unaligned_erms 0 0% 84.13% 4ms 0.84% _dl_call_fini 0 0% 84.13% 4ms 0.84% _dl_lookup_symbol_x 1ms 0.21% 84.34% 4ms 0.84% _dl_map_object_from_fd 0 0% 84.34% 4ms 0.84% mca_base_framework_components_open 0 0% 84.34% 4ms 0.84% mca_base_var_group_register 0 0% 84.34% 4ms 0.84% mca_base_var_register 0 0% 84.34% 3ms 0.63% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.34% 3ms 0.63% CxxTest::RealWorldDescription::tearDown 0 0% 84.34% 3ms 0.63% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.34% 3ms 0.63% PetscFinalize 0 0% 84.34% 3ms 0.63% PetscHeaderDestroy_Private 0 0% 84.34% 3ms 0.63% PetscSetup::tearDownWorld 0 0% 84.34% 3ms 0.63% PetscSetupUtils::CommonFinalize 0 0% 84.34% 3ms 0.63% XOpenDisplay 0 0% 84.34% 3ms 0.63% [hwloc_gl.so] 0 0% 84.34% 3ms 0.63% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.34% 3ms 0.63% _XConnectXCB 2ms 0.42% 84.76% 3ms 0.63% __GI___libc_free 0 0% 84.76% 3ms 0.63% __GI_exit 0 0% 84.76% 3ms 0.63% __dlclose 0 0% 84.76% 3ms 0.63% __run_exit_handlers 3ms 0.63% 85.39% 3ms 0.63% __strcmp_avx2 0 0% 85.39% 3ms 0.63% _dl_close 1ms 0.21% 85.59% 3ms 0.63% _dl_close_worker (inline) 0 0% 85.59% 3ms 0.63% _dl_fini 0 0% 85.59% 3ms 0.63% _dl_map_object_deps 1ms 0.21% 85.80% 3ms 0.63% _dl_name_match_p 0 0% 85.80% 3ms 0.63% _dl_open_relocate_one_object (inline) 0 0% 85.80% 3ms 0.63% _dl_relocate_object 1ms 0.21% 86.01% 3ms 0.63% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.42% 86.43% 3ms 0.63% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 3ms 0.63% 87.06% 3ms 0.63% do_lookup_x 0 0% 87.06% 3ms 0.63% elf_dynamic_do_Rela (inline) 0 0% 87.06% 3ms 0.63% elf_machine_rela (inline) 0 0% 87.06% 3ms 0.63% mca_base_component_repository_release 0 0% 87.06% 3ms 0.63% mca_base_component_var_register 0 0% 87.06% 3ms 0.63% mca_base_components_close 0 0% 87.06% 3ms 0.63% mca_topo_base_dist_graph_neighbors_count 0 0% 87.06% 3ms 0.63% ompi_mpi_finalize 0 0% 87.06% 3ms 0.63% openaux 0 0% 87.06% 3ms 0.63% resolve_map (inline)