File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117294ms, 90.93% of 128997ms total Dropped 1157 nodes (cum <= 644.99ms) flat flat% sum% cum cum% 0 0% 0% 128984ms 100% __libc_start_call_main 0 0% 0% 128984ms 100% __libc_start_main_impl 0 0% 0% 128984ms 100% _start 0 0% 0% 128981ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128981ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128981ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128981ms 100% main 0 0% 0% 128940ms 100% CxxTest::RealTestDescription::run 0 0% 0% 128940ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 128940ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 128940ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 128940ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00078% 0.00078% 128939ms 100% AbstractConvergenceTester::Converge 0 0% 0.00078% 127739ms 99.02% AbstractCardiacProblem::Solve 16ms 0.012% 0.013% 126926ms 98.39% AbstractDynamicLinearPdeSolver::Solve 8ms 0.0062% 0.019% 69444ms 53.83% LinearSystem::Solve 1ms 0.00078% 0.02% 68919ms 53.43% KSPSolve 15ms 0.012% 0.032% 68918ms 53.43% KSPSolve_Private 12ms 0.0093% 0.041% 68605ms 53.18% KSPSolve_SYMMLQ 430ms 0.33% 0.37% 48193ms 37.36% AbstractCardiacTissue::SolveCellSystems 8ms 0.0062% 0.38% 40327ms 31.26% PCApply 9ms 0.007% 0.39% 40307ms 31.25% PCApply_BJacobi_Singleblock 0 0% 0.39% 38068ms 29.51% KSPSolve_PREONLY (partial-inline) 889ms 0.69% 1.08% 37925ms 29.40% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0023% 1.08% 37039ms 28.71% PCApply_ICC 12ms 0.0093% 1.09% 37036ms 28.71% MatSolve 36624ms 28.39% 29.48% 37024ms 28.70% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0016% 29.48% 34550ms 26.78% KSP_PCApply.lto_priv.18 7727ms 5.99% 35.47% 33701ms 26.13% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.007% 35.48% 22931ms 17.78% MatMult 331ms 0.26% 35.73% 22922ms 17.77% MatMult_SeqAIJ (partial-inline) 22376ms 17.35% 53.08% 22921ms 17.77% MatMult_SeqAIJ_Inode (inline) 2345ms 1.82% 54.90% 17239ms 13.36% CardiacNewtonSolver::Solve 1428ms 1.11% 56.01% 10323ms 8.00% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5658ms 4.39% 60.39% 10150ms 7.87% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 197ms 0.15% 60.54% 8919ms 6.91% AbstractCardiacTissue::UpdateCaches (inline) 8624ms 6.69% 67.23% 8624ms 6.69% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1666ms 1.29% 68.52% 8356ms 6.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1182ms 0.92% 69.44% 8045ms 6.24% BidomainSolver::SetupLinearSystem 1ms 0.00078% 69.44% 7632ms 5.92% KSP_PCApply (partial-inline) 4ms 0.0031% 69.44% 7128ms 5.53% KSPConvergedDefault 4176ms 3.24% 72.68% 4282ms 3.32% __ieee754_log_fma 0 0% 72.68% 4234ms 3.28% boost::numeric::ublas::norm_inf (inline) 2948ms 2.29% 74.96% 4234ms 3.28% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.96% 4234ms 3.28% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.96% 4234ms 3.28% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0039% 74.97% 3186ms 2.47% MatNullSpaceRemove 2017ms 1.56% 76.53% 3130ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 42ms 0.033% 76.56% 3113ms 2.41% std::pow (inline) 3088ms 2.39% 78.96% 3088ms 2.39% ddot_ 414ms 0.32% 79.28% 3053ms 2.37% __pow 2833ms 2.20% 81.48% 2833ms 2.20% __memcpy_avx_unaligned_erms 0 0% 81.48% 2783ms 2.16% PetscMemcpy (inline) 6ms 0.0047% 81.48% 2621ms 2.03% VecDot 0 0% 81.48% 2615ms 2.03% VecDot_Seq 3ms 0.0023% 81.48% 2615ms 2.03% VecXDot_Seq_Private.constprop.0 352ms 0.27% 81.76% 2607ms 2.02% __ieee754_pow_fma 20ms 0.016% 81.77% 2402ms 1.86% VecCopy 2ms 0.0016% 81.77% 2381ms 1.85% VecCopy_Seq (partial-inline) 15ms 0.012% 81.78% 2086ms 1.62% VecAXPY 2ms 0.0016% 81.79% 2078ms 1.61% AbstractFeVolumeIntegralAssembler::DoAssemble 6ms 0.0047% 81.79% 2071ms 1.61% VecAXPY_Seq 2059ms 1.60% 83.39% 2059ms 1.60% daxpy_ 5ms 0.0039% 83.39% 2026ms 1.57% VecMDot 9ms 0.007% 83.40% 2021ms 1.57% VecMXDot_Private 2006ms 1.56% 84.95% 2008ms 1.56% VecMDot_Seq 29ms 0.022% 84.97% 1733ms 1.34% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1524ms 1.18% 86.16% 1576ms 1.22% exp_inline (inline) 0 0% 86.16% 1419ms 1.10% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.16% 1272ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.16% 1272ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.16% 1272ms 0.99% boost_numeric_ublas_abs (inline) 1272ms 0.99% 87.14% 1272ms 0.99% std::abs (inline) 6ms 0.0047% 87.15% 1155ms 0.9% VecMAXPY 1143ms 0.89% 88.03% 1149ms 0.89% VecMAXPY_Seq 1ms 0.00078% 88.03% 1135ms 0.88% boost::numeric::ublas::matrix_assign (inline) 233ms 0.18% 88.21% 1127ms 0.87% boost::numeric::ublas::indexing_matrix_assign 676ms 0.52% 88.74% 1039ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.74% 1029ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.74% 1029ms 0.8% CuboidMeshConstructor::Construct 2ms 0.0016% 88.74% 1029ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 1016ms 0.79% 89.53% 1016ms 0.79% [libchaste_heart.so] 2ms 0.0016% 89.53% 911ms 0.71% Element::Element 9ms 0.007% 89.54% 906ms 0.7% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0016% 89.54% 895ms 0.69% AbstractBidomainSolver::FinaliseLinearSystem 241ms 0.19% 89.72% 891ms 0.69% AbstractBidomainSolver::CheckCompatibilityCondition 5ms 0.0039% 89.73% 884ms 0.69% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.73% 848ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 8ms 0.0062% 89.74% 846ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 6ms 0.0047% 89.74% 836ms 0.65% VecScale 2ms 0.0016% 89.74% 830ms 0.64% VecScale_Seq 827ms 0.64% 90.38% 827ms 0.64% dscal_ 3ms 0.0023% 90.39% 764ms 0.59% VecNorm 1ms 0.00078% 90.39% 757ms 0.59% VecNorm_Seq 0 0% 90.39% 743ms 0.58% BidomainProblem::WriteOneStep 697ms 0.54% 90.93% 697ms 0.54% __memset_avx2_unaligned_erms 1ms 0.00078% 90.93% 674ms 0.52% VecDuplicate 0 0% 90.93% 659ms 0.51% AbstractFeAssemblerInterface::Assemble (inline)