File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12550ms, 85.51% of 14677ms total Dropped 746 nodes (cum <= 73.39ms) flat flat% sum% cum cum% 0 0% 0% 14666ms 99.93% __libc_start_call_main 0 0% 0% 14666ms 99.93% __libc_start_main_impl 0 0% 0% 14666ms 99.93% _start 0 0% 0% 14663ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14663ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14663ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14663ms 99.90% main 0 0% 0% 14623ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14623ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14623ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14600ms 99.48% AbstractCardiacProblem::Solve 4ms 0.027% 0.041% 11285ms 76.89% AbstractDynamicLinearPdeSolver::Solve 55ms 0.37% 0.42% 8890ms 60.57% AbstractCardiacTissue::SolveCellSystems 83ms 0.57% 0.98% 5322ms 36.26% AbstractCardiacCell::ComputeExceptVoltage 118ms 0.8% 1.79% 4636ms 31.59% AbstractOneStepIvpOdeSolver::InternalSolve 148ms 1.01% 2.79% 3911ms 26.65% EulerIvpOdeSolver::CalculateNextYValue 798ms 5.44% 8.23% 3730ms 25.41% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1738ms 11.84% 20.07% 3449ms 23.50% __GI___exp 1ms 0.0068% 20.08% 3253ms 22.16% MonodomainProblem::WriteOneStep 2ms 0.014% 20.09% 3091ms 21.06% Hdf5DataWriter::PutVector 1ms 0.0068% 20.10% 3059ms 20.84% H5Dwrite 2ms 0.014% 20.11% 3039ms 20.71% H5D__write 147ms 1.00% 21.11% 2854ms 19.45% AbstractCardiacTissue::UpdateCaches (inline) 828ms 5.64% 26.76% 2637ms 17.97% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.76% 1877ms 12.79% H5D__chunk_collective_write 7ms 0.048% 26.80% 1877ms 12.79% H5F_set_coll_metadata_reads 15ms 0.1% 26.91% 1695ms 11.55% H5FD_s3comms_uriencode 1303ms 8.88% 35.78% 1648ms 11.23% __ieee754_exp_fma 0 0% 35.78% 1584ms 10.79% LinearSystem::Solve 0 0% 35.78% 1468ms 10.00% KSPSolve 4ms 0.027% 35.81% 1468ms 10.00% KSPSolve_Private 5ms 0.034% 35.85% 1464ms 9.97% KSPSolve_CG 44ms 0.3% 36.14% 1394ms 9.50% 6ms 0.041% 36.19% 1382ms 9.42% H5F_block_write 1ms 0.0068% 36.19% 1376ms 9.38% H5PB_write 1ms 0.0068% 36.20% 1375ms 9.37% H5F__accum_write 0 0% 36.20% 1374ms 9.36% H5FD_write 1ms 0.0068% 36.21% 1282ms 8.73% H5D__mpio_select_write 1ms 0.0068% 36.21% 1170ms 7.97% PMPI_File_write_at_all 1144ms 7.79% 44.01% 1148ms 7.82% __GI_pwritev64 11ms 0.075% 44.08% 1044ms 7.11% H5D__chunk_cacheable 8ms 0.055% 44.14% 952ms 6.49% std::pow (inline) 89ms 0.61% 44.74% 944ms 6.43% __pow 283ms 1.93% 46.67% 890ms 6.06% H5S_select_iterate 0 0% 46.67% 858ms 5.85% PCApply 1ms 0.0068% 46.68% 858ms 5.85% PCApply_BJacobi_Singleblock 81ms 0.55% 47.23% 855ms 5.83% __ieee754_pow_fma 0 0% 47.23% 822ms 5.60% KSPSolve_PREONLY 1ms 0.0068% 47.24% 818ms 5.57% PCApply_ICC 0 0% 47.24% 817ms 5.57% MatSolve 812ms 5.53% 52.77% 817ms 5.57% MatSolve_SeqSBAIJ_1_NaturalOrdering 389ms 2.65% 55.42% 789ms 5.38% MonodomainSolver::SetupLinearSystem 75ms 0.51% 55.93% 616ms 4.20% H5D__chunk_set_sizes 1ms 0.0068% 55.94% 580ms 3.95% KSP_PCApply.lto_priv.7 4ms 0.027% 55.97% 518ms 3.53% MatMult 510ms 3.47% 59.44% 514ms 3.50% MatMult_SeqAIJ 214ms 1.46% 60.90% 460ms 3.13% CellLuoRudy1991FromCellML::VerifyStateVariables 432ms 2.94% 63.84% 432ms 2.94% log_inline (inline) 62ms 0.42% 64.26% 407ms 2.77% H5S_mpio_space_type 2ms 0.014% 64.28% 352ms 2.40% KSPConvergedDefault 300ms 2.04% 66.32% 305ms 2.08% exp_inline (inline) 108ms 0.74% 67.06% 292ms 1.99% TimeStepper::TimeStepper 0 0% 67.06% 283ms 1.93% KSP_PCApply 216ms 1.47% 68.53% 275ms 1.87% top12 (inline) 273ms 1.86% 70.39% 273ms 1.86% [libchaste_heart.so] 49ms 0.33% 70.72% 208ms 1.42% AbstractCardiacCell::SetVoltage (partial-inline) 49ms 0.33% 71.06% 198ms 1.35% __GI___libc_malloc 8ms 0.055% 71.11% 195ms 1.33% H5VM_chunk_index 191ms 1.30% 72.41% 191ms 1.30% ddot_ 15ms 0.1% 72.51% 176ms 1.20% ompi_datatype_destroy 124ms 0.84% 73.36% 172ms 1.17% _int_malloc 171ms 1.17% 74.52% 171ms 1.17% asuint64 (inline) 3ms 0.02% 74.55% 169ms 1.15% MPI_Type_free 167ms 1.14% 75.68% 167ms 1.14% TimeStepper::CalculateNextTime 0 0% 75.68% 159ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 19ms 0.13% 75.81% 159ms 1.08% __GI___libc_free 112ms 0.76% 76.58% 157ms 1.07% AbstractOneStepIvpOdeSolver::Solve 9ms 0.061% 76.64% 146ms 0.99% ompi_info_register_framework_params 118ms 0.8% 77.44% 143ms 0.97% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 36ms 0.25% 77.69% 143ms 0.97% ompi_datatype_release_args 6ms 0.041% 77.73% 141ms 0.96% ompi_datatype_create 53ms 0.36% 78.09% 140ms 0.95% _int_free 115ms 0.78% 78.87% 136ms 0.93% AbstractParameterisedSystem::SetAnyVariable 26ms 0.18% 79.05% 135ms 0.92% H5S_set_version 53ms 0.36% 79.41% 130ms 0.89% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 4ms 0.027% 79.44% 130ms 0.89% PMPI_File_set_view 0 0% 79.44% 123ms 0.84% VecNorm 1ms 0.0068% 79.44% 118ms 0.8% VecNorm_Seq 96ms 0.65% 80.10% 117ms 0.8% AbstractParameterisedSystem::GetAnyVariable 114ms 0.78% 80.87% 114ms 0.78% __ieee754_log_fma 52ms 0.35% 81.23% 113ms 0.77% H5S_hyper_add_span_element 110ms 0.75% 81.98% 110ms 0.75% __memcpy_avx_unaligned_erms 48ms 0.33% 82.31% 109ms 0.74% H5VM_array_calc 0 0% 82.31% 99ms 0.67% VecTDot 0 0% 82.31% 99ms 0.67% VecTDot_Seq 0 0% 82.31% 99ms 0.67% VecXDot_Seq_Private.constprop.0 0 0% 82.31% 95ms 0.65% VecDuplicate 1ms 0.0068% 82.31% 95ms 0.65% VecDuplicate_MPI 30ms 0.2% 82.52% 94ms 0.64% AbstractCardiacCell::GetVoltage (partial-inline) 94ms 0.64% 83.16% 94ms 0.64% H5VM_array_offset_pre 94ms 0.64% 83.80% 94ms 0.64% H5VM_chunk_index_scaled 94ms 0.64% 84.44% 94ms 0.64% std::isinf (inline) 1ms 0.0068% 84.45% 93ms 0.63% H5Pcreate 7ms 0.048% 84.49% 91ms 0.62% H5P_create_id 0 0% 84.49% 88ms 0.6% std::vector::_M_assign_aux (inline) 0 0% 84.49% 88ms 0.6% std::vector::assign (inline) 2ms 0.014% 84.51% 86ms 0.59% ompi_datatype_duplicate 3ms 0.02% 84.53% 85ms 0.58% PMPI_Type_create_resized 4ms 0.027% 84.55% 81ms 0.55% H5D__chunk_allocated 0 0% 84.55% 77ms 0.52% H5D__select_write 2ms 0.014% 84.57% 77ms 0.52% H5Dgather 76ms 0.52% 85.09% 77ms 0.52% std::vector::operator[] (inline) 0 0% 85.09% 75ms 0.51% H5D__contig_fill 1ms 0.0068% 85.09% 75ms 0.51% H5D__contig_write 0 0% 85.09% 75ms 0.51% H5VM_opvv 48ms 0.33% 85.42% 75ms 0.51% TimeStepper::AdvanceOneTimeStep 13ms 0.089% 85.51% 74ms 0.5% std::__copy_move::__copy_m (inline) 0 0% 85.51% 74ms 0.5% std::__copy_move_a (inline) 0 0% 85.51% 74ms 0.5% std::__copy_move_a1 (inline) 0 0% 85.51% 74ms 0.5% std::__copy_move_a2 (inline) 0 0% 85.51% 74ms 0.5% std::copy (inline)