File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 306ms, 89.74% of 341ms total Dropped 165 nodes (cum <= 1.71ms) flat flat% sum% cum cum% 0 0% 0% 332ms 97.36% __libc_start_call_main 0 0% 0% 332ms 97.36% __libc_start_main_impl 0 0% 0% 332ms 97.36% _start 0 0% 0% 329ms 96.48% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 329ms 96.48% CxxTest::TestRunner::runAllTests 0 0% 0% 329ms 96.48% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 329ms 96.48% main 0 0% 0% 300ms 87.98% CxxTest::RealTestDescription::run 0 0% 0% 300ms 87.98% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 300ms 87.98% CxxTest::TestRunner::runTest (inline) 0 0% 0% 300ms 87.98% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 300ms 87.98% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 296ms 86.80% AbstractCardiacProblem::Solve 0 0% 0% 295ms 86.51% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 262ms 76.83% LinearSystem::Solve 0 0% 0% 261ms 76.54% KSPSolve 0 0% 0% 261ms 76.54% KSPSolve_CG 0 0% 0% 261ms 76.54% KSPSolve_Private 0 0% 0% 148ms 43.40% KSP_PCApply.lto_priv.7 0 0% 0% 138ms 40.47% PCApply 0 0% 0% 138ms 40.47% PCApply_BJacobi_Singleblock 0 0% 0% 116ms 34.02% KSPSolve_PREONLY (partial-inline) 0 0% 0% 107ms 31.38% MatSolve 106ms 31.09% 31.09% 107ms 31.38% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 31.09% 107ms 31.38% PCApply_ICC 0 0% 31.09% 62ms 18.18% MatMult 1ms 0.29% 31.38% 62ms 18.18% MatMult_SeqAIJ (partial-inline) 60ms 17.60% 48.97% 62ms 18.18% MatMult_SeqAIJ_Inode (inline) 0 0% 48.97% 31ms 9.09% MatNullSpaceRemove 0 0% 48.97% 29ms 8.50% AbstractCardiacTissue::SolveCellSystems 29ms 8.50% 57.48% 29ms 8.50% ddot_ 0 0% 57.48% 28ms 8.21% CxxTest::RealWorldDescription::setUp 0 0% 57.48% 28ms 8.21% PMPI_Init_thread 0 0% 57.48% 28ms 8.21% PetscInitialize 0 0% 57.48% 28ms 8.21% PetscSetup::setUpWorld 0 0% 57.48% 28ms 8.21% PetscSetupUtils::CommonSetup 0 0% 57.48% 28ms 8.21% PetscSetupUtils::InitialisePetsc 0 0% 57.48% 28ms 8.21% ompi_mpi_init 0 0% 57.48% 23ms 6.74% 0 0% 57.48% 21ms 6.16% VecTDot 0 0% 57.48% 21ms 6.16% VecTDot_Seq 0 0% 57.48% 21ms 6.16% VecXDot_Seq_Private.constprop.0 0 0% 57.48% 19ms 5.57% VecMDot 18ms 5.28% 62.76% 19ms 5.57% VecMDot_Seq 0 0% 62.76% 19ms 5.57% VecMXDot_Private 0 0% 62.76% 19ms 5.57% orte_init 0 0% 62.76% 18ms 5.28% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.29% 63.05% 15ms 4.40% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 63.05% 15ms 4.40% VecAXPY 0 0% 63.05% 15ms 4.40% VecAXPY_Seq 15ms 4.40% 67.45% 15ms 4.40% daxpy_ 1ms 0.29% 67.74% 14ms 4.11% EulerIvpOdeSolver::CalculateNextYValue 2ms 0.59% 68.33% 13ms 3.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1ms 0.29% 68.62% 12ms 3.52% VecMAXPY 0 0% 68.62% 12ms 3.52% hwloc_topology_load 10ms 2.93% 71.55% 11ms 3.23% VecMAXPY_Seq 7ms 2.05% 73.61% 11ms 3.23% __GI___exp 0 0% 73.61% 11ms 3.23% hwloc_linux_get_tid_last_cpu_location 0 0% 73.61% 10ms 2.93% KSP_PCApply (partial-inline) 0 0% 73.61% 9ms 2.64% _dl_init 0 0% 73.61% 9ms 2.64% call_init (inline) 0 0% 73.61% 8ms 2.35% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.88% 74.49% 8ms 2.35% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.49% 8ms 2.35% VecNorm 0 0% 74.49% 8ms 2.35% VecNorm_Seq 0 0% 74.49% 8ms 2.35% mca_base_framework_open 0 0% 74.49% 8ms 2.35% mca_base_framework_register 0 0% 74.49% 7ms 2.05% _dl_start_user 0 0% 74.49% 6ms 1.76% VecAYPX 6ms 1.76% 76.25% 6ms 1.76% VecAYPX_Seq 6ms 1.76% 78.01% 6ms 1.76% __GI___libc_read 0 0% 78.01% 6ms 1.76% __GI__dl_catch_exception 0 0% 78.01% 6ms 1.76% _dl_catch_error 0 0% 78.01% 6ms 1.76% _dlerror_run 4ms 1.17% 79.18% 6ms 1.76% _int_malloc 0 0% 79.18% 6ms 1.76% mca_base_framework_components_register 0 0% 79.18% 6ms 1.76% mca_base_var_group_register 0 0% 79.18% 6ms 1.76% mca_base_var_register 0 0% 79.18% 5ms 1.47% VecDuplicate 0 0% 79.18% 5ms 1.47% VecDuplicate_Seq 2ms 0.59% 79.77% 5ms 1.47% __GI___libc_malloc 0 0% 79.77% 5ms 1.47% ___dlopen 0 0% 79.77% 5ms 1.47% _dl_open 1ms 0.29% 80.06% 5ms 1.47% boost::serialization::singleton::get_instance 0 0% 80.06% 5ms 1.47% dl_open_worker 0 0% 80.06% 5ms 1.47% dlopen_doit 0 0% 80.06% 5ms 1.47% dlopen_implementation (inline) 0 0% 80.06% 5ms 1.47% opal_stackframe_output 1ms 0.29% 80.35% 5ms 1.47% orte_ess_base_proc_binding 0 0% 80.35% 4ms 1.17% AbstractCardiacProblem::Initialise 0 0% 80.35% 4ms 1.17% BidomainSolver::SetupLinearSystem 4ms 1.17% 81.52% 4ms 1.17% [libchaste_heart.so] 0 0% 81.52% 4ms 1.17% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 81.52% 4ms 1.17% mca_base_component_find 0 0% 81.52% 4ms 1.17% mca_base_component_repository_open 1ms 0.29% 81.82% 4ms 1.17% mca_base_var_generate_full_name4 0 0% 81.82% 4ms 1.17% opal_hwloc_base_get_topology 1ms 0.29% 82.11% 3ms 0.88% PetscMallocA 0 0% 82.11% 3ms 0.88% VecSet 0 0% 82.11% 3ms 0.88% VecSetType 0 0% 82.11% 3ms 0.88% VecSet_Seq 0 0% 82.11% 3ms 0.88% __GI_exit 0 0% 82.11% 3ms 0.88% __cxa_finalize 3ms 0.88% 82.99% 3ms 0.88% __ieee754_exp_fma 1ms 0.29% 83.28% 3ms 0.88% __ieee754_pow_fma 0 0% 83.28% 3ms 0.88% __libc_calloc 0 0% 83.28% 3ms 0.88% __pow 0 0% 83.28% 3ms 0.88% __run_exit_handlers 3ms 0.88% 84.16% 3ms 0.88% __strcmp_evex 0 0% 84.16% 3ms 0.88% _dl_call_fini 0 0% 84.16% 3ms 0.88% _dl_fini 2ms 0.59% 84.75% 3ms 0.88% _dl_fixup 0 0% 84.75% 3ms 0.88% _dl_runtime_resolve_xsavec 0 0% 84.75% 3ms 0.88% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 84.75% 3ms 0.88% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.75% 3ms 0.88% dl_open_worker_begin 0 0% 84.75% 3ms 0.88% std::pow (inline) 1ms 0.29% 85.04% 2ms 0.59% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 85.04% 2ms 0.59% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.04% 2ms 0.59% PetscMallocAlign 0 0% 85.04% 2ms 0.59% TrianglesMeshReader::GetNextItemFromStream 0 0% 85.04% 2ms 0.59% VecCreate 0 0% 85.04% 2ms 0.59% VecDestroy 2ms 0.59% 85.63% 2ms 0.59% VecRestoreArrayRead 0 0% 85.63% 2ms 0.59% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 2ms 0.59% 86.22% 2ms 0.59% __GI___clock_nanosleep 0 0% 86.22% 2ms 0.59% __GI___nanosleep 2ms 0.59% 86.80% 2ms 0.59% __memcpy_avx512_unaligned_erms 0 0% 86.80% 2ms 0.59% __posix_memalign 2ms 0.59% 87.39% 2ms 0.59% __strlen_evex 0 0% 87.39% 2ms 0.59% _dl_lookup_symbol_x 0 0% 87.39% 2ms 0.59% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 1ms 0.29% 87.68% 2ms 0.59% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 87.68% 2ms 0.59% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 87.68% 2ms 0.59% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 87.68% 2ms 0.59% clone3 2ms 0.59% 88.27% 2ms 0.59% do_lookup_x 2ms 0.59% 88.86% 2ms 0.59% malloc_consolidate 0 0% 88.86% 2ms 0.59% mca_base_component_var_register 0 0% 88.86% 2ms 0.59% mca_base_framework_components_open 0 0% 88.86% 2ms 0.59% mca_topo_base_dist_graph_neighbors_count 0 0% 88.86% 2ms 0.59% start_thread 2ms 0.59% 89.44% 2ms 0.59% std::_Rb_tree_increment 1ms 0.29% 89.74% 2ms 0.59% udev_enumerate_scan_devices 0 0% 89.74% 2ms 0.59% usleep