File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 10805ms, 89.11% of 12125ms total Dropped 677 nodes (cum <= 60.62ms) flat flat% sum% cum cum% 0 0% 0% 12118ms 99.94% __libc_start_call_main 0 0% 0% 12118ms 99.94% __libc_start_main_impl 0 0% 0% 12118ms 99.94% _start 0 0% 0% 12116ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 12116ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 12116ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 12116ms 99.93% main 0 0% 0% 12084ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 12084ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 12084ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 12065ms 99.51% AbstractCardiacProblem::Solve 0 0% 0% 9181ms 75.72% AbstractDynamicLinearPdeSolver::Solve 31ms 0.26% 0.26% 7202ms 59.40% AbstractCardiacTissue::SolveCellSystems 38ms 0.31% 0.57% 4454ms 36.73% AbstractCardiacCell::ComputeExceptVoltage 72ms 0.59% 1.16% 4031ms 33.25% AbstractOneStepIvpOdeSolver::InternalSolve 104ms 0.86% 2.02% 3520ms 29.03% EulerIvpOdeSolver::CalculateNextYValue 965ms 7.96% 9.98% 3391ms 27.97% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.98% 2822ms 23.27% MonodomainProblem::WriteOneStep 1ms 0.0082% 9.99% 2752ms 22.70% Hdf5DataWriter::PutVector 1ms 0.0082% 10.00% 2735ms 22.56% H5Dwrite 3ms 0.025% 10.02% 2724ms 22.47% H5D__write 1002ms 8.26% 18.28% 2637ms 21.75% __GI___exp 49ms 0.4% 18.69% 2115ms 17.44% AbstractCardiacTissue::UpdateCaches (inline) 597ms 4.92% 23.61% 2005ms 16.54% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0082% 23.62% 1709ms 14.09% H5D__chunk_collective_write 10ms 0.082% 23.70% 1708ms 14.09% H5F_set_coll_metadata_reads 6ms 0.049% 23.75% 1529ms 12.61% H5FD_s3comms_uriencode 1400ms 11.55% 35.30% 1406ms 11.60% __ieee754_exp_fma 0 0% 35.30% 1258ms 10.38% LinearSystem::Solve 19ms 0.16% 35.46% 1218ms 10.05% 0 0% 35.46% 1200ms 9.90% H5FD_write 0 0% 35.46% 1200ms 9.90% H5F__accum_write 0 0% 35.46% 1200ms 9.90% H5F_block_write 0 0% 35.46% 1200ms 9.90% H5PB_write 0 0% 35.46% 1191ms 9.82% KSPSolve 4ms 0.033% 35.49% 1191ms 9.82% KSPSolve_Private 3ms 0.025% 35.51% 1184ms 9.76% KSPSolve_CG 1ms 0.0082% 35.52% 1151ms 9.49% H5D__mpio_select_write 0 0% 35.52% 1109ms 9.15% PMPI_File_write_at_all 1082ms 8.92% 44.45% 1091ms 9.00% __GI_pwritev64 12ms 0.099% 44.54% 975ms 8.04% H5D__chunk_cacheable 309ms 2.55% 47.09% 864ms 7.13% H5S_select_iterate 33ms 0.27% 47.36% 794ms 6.55% std::pow (inline) 41ms 0.34% 47.70% 756ms 6.24% __pow 218ms 1.80% 49.50% 709ms 5.85% MonodomainSolver::SetupLinearSystem 42ms 0.35% 49.85% 702ms 5.79% __ieee754_pow_fma 1ms 0.0082% 49.86% 649ms 5.35% PCApply 2ms 0.016% 49.87% 649ms 5.35% PCApply_BJacobi_Singleblock 0 0% 49.87% 632ms 5.21% KSPSolve_PREONLY 0 0% 49.87% 630ms 5.20% MatSolve 627ms 5.17% 55.04% 630ms 5.20% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 55.04% 630ms 5.20% PCApply_ICC 570ms 4.70% 59.74% 570ms 4.70% [libchaste_heart.so] 54ms 0.45% 60.19% 566ms 4.67% H5D__chunk_set_sizes 6ms 0.049% 60.24% 547ms 4.51% MatMult 540ms 4.45% 64.69% 541ms 4.46% MatMult_SeqAIJ 308ms 2.54% 67.23% 493ms 4.07% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 67.23% 467ms 3.85% KSP_PCApply.lto_priv.7 45ms 0.37% 67.60% 398ms 3.28% H5S_mpio_space_type 285ms 2.35% 69.95% 337ms 2.78% exp_inline (inline) 318ms 2.62% 72.58% 318ms 2.62% log_inline (inline) 266ms 2.19% 74.77% 266ms 2.19% [libm.so.6] 17ms 0.14% 74.91% 233ms 1.92% H5VM_chunk_index 0 0% 74.91% 220ms 1.81% KSPConvergedDefault 84ms 0.69% 75.60% 199ms 1.64% __GI___libc_malloc 182ms 1.50% 77.11% 182ms 1.50% H5VM_chunk_index_scaled 0 0% 77.11% 182ms 1.50% KSP_PCApply 42ms 0.35% 77.45% 163ms 1.34% TimeStepper::TimeStepper 15ms 0.12% 77.58% 159ms 1.31% ompi_datatype_destroy 2ms 0.016% 77.59% 156ms 1.29% MPI_Type_free 8ms 0.066% 77.66% 154ms 1.27% ompi_datatype_create 16ms 0.13% 77.79% 143ms 1.18% __GI___libc_free 40ms 0.33% 78.12% 137ms 1.13% ompi_datatype_release_args 2ms 0.016% 78.14% 137ms 1.13% ompi_info_register_framework_params 127ms 1.05% 79.18% 127ms 1.05% [libchaste_ode.so] 82ms 0.68% 79.86% 127ms 1.05% _int_free 91ms 0.75% 80.61% 125ms 1.03% _int_malloc 37ms 0.31% 80.92% 121ms 1% AbstractCardiacCell::SetVoltage (partial-inline) 114ms 0.94% 81.86% 114ms 0.94% TimeStepper::CalculateNextTime 24ms 0.2% 82.05% 109ms 0.9% H5S_set_version 109ms 0.9% 82.95% 109ms 0.9% ddot_ 64ms 0.53% 83.48% 99ms 0.82% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 71ms 0.59% 84.07% 90ms 0.74% AbstractOneStepIvpOdeSolver::Solve 41ms 0.34% 84.40% 90ms 0.74% H5S_hyper_add_span_element 89ms 0.73% 85.14% 89ms 0.73% __memcpy_avx512_unaligned_erms 38ms 0.31% 85.45% 89ms 0.73% std::__cxx11::basic_string::basic_string 26ms 0.21% 85.67% 88ms 0.73% ompi_datatype_set_args 63ms 0.52% 86.19% 87ms 0.72% __libc_calloc 37ms 0.31% 86.49% 85ms 0.7% H5VM_array_calc 2ms 0.016% 86.51% 85ms 0.7% PMPI_Type_create_resized 23ms 0.19% 86.70% 83ms 0.68% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 83ms 0.68% 87.38% 83ms 0.68% ReplicatableVector::operator[] 2ms 0.016% 87.40% 79ms 0.65% opal_datatype_create_desc 0 0% 87.40% 79ms 0.65% std::vector::_M_assign_aux (inline) 0 0% 87.40% 79ms 0.65% std::vector::assign (inline) 49ms 0.4% 87.80% 78ms 0.64% TimeStepper::AdvanceOneTimeStep 54ms 0.45% 88.25% 74ms 0.61% AbstractParameterisedSystem::GetAnyVariable 74ms 0.61% 88.86% 74ms 0.61% __ieee754_log_fma 0 0% 88.86% 70ms 0.58% Hdf5DataWriter::PutUnlimitedVariable 1ms 0.0082% 88.87% 70ms 0.58% MPI_Type_create_hindexed 1ms 0.0082% 88.87% 70ms 0.58% ompi_datatype_duplicate 0 0% 88.87% 67ms 0.55% VecDuplicate 0 0% 88.87% 67ms 0.55% VecDuplicate_MPI 24ms 0.2% 89.07% 66ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0082% 89.08% 65ms 0.54% VecTDot 0 0% 89.08% 64ms 0.53% PMPI_File_set_view 4ms 0.033% 89.11% 64ms 0.53% PMPI_Type_vector 0 0% 89.11% 62ms 0.51% VecTDot_Seq 0 0% 89.11% 62ms 0.51% VecXDot_Seq_Private.constprop.0 0 0% 89.11% 61ms 0.5% std::__copy_move::__copy_m (inline) 0 0% 89.11% 61ms 0.5% std::__copy_move_a (inline) 0 0% 89.11% 61ms 0.5% std::__copy_move_a1 (inline) 0 0% 89.11% 61ms 0.5% std::__copy_move_a2 (inline) 0 0% 89.11% 61ms 0.5% std::copy (inline)