File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 346ms, 92.76% of 373ms total Dropped 133 nodes (cum <= 1.86ms) flat flat% sum% cum cum% 0 0% 0% 368ms 98.66% __libc_start_call_main 0 0% 0% 368ms 98.66% __libc_start_main_impl 0 0% 0% 368ms 98.66% _start 0 0% 0% 366ms 98.12% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 366ms 98.12% CxxTest::TestRunner::runAllTests 0 0% 0% 366ms 98.12% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 366ms 98.12% main 0 0% 0% 332ms 89.01% CxxTest::RealTestDescription::run 0 0% 0% 332ms 89.01% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 332ms 89.01% CxxTest::TestRunner::runTest (inline) 0 0% 0% 332ms 89.01% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 332ms 89.01% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 328ms 87.94% AbstractCardiacProblem::Solve 0 0% 0% 327ms 87.67% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 306ms 82.04% KSPSolve 0 0% 0% 306ms 82.04% KSPSolve_Private 0 0% 0% 306ms 82.04% LinearSystem::Solve 0 0% 0% 304ms 81.50% KSPSolve_CG 0 0% 0% 173ms 46.38% KSP_PCApply.lto_priv.7 0 0% 0% 169ms 45.31% PCApply 0 0% 0% 168ms 45.04% PCApply_BJacobi_Singleblock 0 0% 0% 142ms 38.07% KSPSolve_PREONLY (partial-inline) 0 0% 0% 139ms 37.27% MatSolve 137ms 36.73% 36.73% 139ms 37.27% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.73% 139ms 37.27% PCApply_ICC 1ms 0.27% 37.00% 55ms 14.75% MatMult 0 0% 37.00% 54ms 14.48% MatMult_SeqAIJ 54ms 14.48% 51.47% 54ms 14.48% MatMult_SeqAIJ_Inode (inline) 48ms 12.87% 64.34% 48ms 12.87% ddot_ 0 0% 64.34% 36ms 9.65% VecTDot 0 0% 64.34% 36ms 9.65% VecTDot_Seq (partial-inline) 0 0% 64.34% 36ms 9.65% VecXDot_Seq_Private.constprop.0 0 0% 64.34% 31ms 8.31% CxxTest::RealWorldDescription::setUp 0 0% 64.34% 31ms 8.31% PMPI_Init_thread 0 0% 64.34% 31ms 8.31% PetscInitialize 0 0% 64.34% 31ms 8.31% PetscSetup::setUpWorld 0 0% 64.34% 31ms 8.31% PetscSetupUtils::CommonSetup 0 0% 64.34% 31ms 8.31% PetscSetupUtils::InitialisePetsc 0 0% 64.34% 31ms 8.31% ompi_mpi_init 1ms 0.27% 64.61% 27ms 7.24% 0 0% 64.61% 21ms 5.63% orte_init 0 0% 64.61% 20ms 5.36% MatNullSpaceRemove 0 0% 64.61% 19ms 5.09% AbstractCardiacTissue::SolveCellSystems 0 0% 64.61% 15ms 4.02% hwloc_topology_load 0 0% 64.61% 14ms 3.75% hwloc_linux_get_tid_last_cpu_location 0 0% 64.61% 13ms 3.49% VecAYPX 13ms 3.49% 68.10% 13ms 3.49% VecAYPX_Seq 0 0% 68.10% 13ms 3.49% mca_base_framework_open 0 0% 68.10% 12ms 3.22% VecAXPY 0 0% 68.10% 12ms 3.22% VecAXPY_Seq 0 0% 68.10% 12ms 3.22% VecNorm 0 0% 68.10% 12ms 3.22% VecNorm_Seq 12ms 3.22% 71.31% 12ms 3.22% daxpy_ 0 0% 71.31% 11ms 2.95% VecMDot 1ms 0.27% 71.58% 11ms 2.95% VecMXDot_Private 0 0% 71.58% 11ms 2.95% mca_base_framework_components_register 0 0% 71.58% 11ms 2.95% mca_base_framework_register 0 0% 71.58% 10ms 2.68% AbstractCardiacCell::ComputeExceptVoltage 10ms 2.68% 74.26% 10ms 2.68% VecMDot_Seq 0 0% 74.26% 9ms 2.41% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 74.26% 9ms 2.41% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.27% 74.53% 9ms 2.41% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.53% 9ms 2.41% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.27% 74.80% 9ms 2.41% VecMAXPY 0 0% 74.80% 9ms 2.41% __GI__dl_catch_exception 0 0% 74.80% 9ms 2.41% ___dlopen 0 0% 74.80% 9ms 2.41% _dl_catch_error 0 0% 74.80% 9ms 2.41% _dl_open 0 0% 74.80% 9ms 2.41% _dlerror_run 0 0% 74.80% 9ms 2.41% dl_open_worker 0 0% 74.80% 9ms 2.41% dlopen_doit 0 0% 74.80% 9ms 2.41% dlopen_implementation (inline) 0 0% 74.80% 9ms 2.41% mca_base_component_find 0 0% 74.80% 9ms 2.41% mca_base_component_repository_open 2ms 0.54% 75.34% 8ms 2.14% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 75.34% 8ms 2.14% VecDuplicate 1ms 0.27% 75.60% 8ms 2.14% VecDuplicate_Seq 8ms 2.14% 77.75% 8ms 2.14% VecMAXPY_Seq 5ms 1.34% 79.09% 8ms 2.14% __GI___exp 0 0% 79.09% 8ms 2.14% _dl_init 0 0% 79.09% 8ms 2.14% call_init (inline) 0 0% 79.09% 8ms 2.14% opal_stackframe_output 7ms 1.88% 80.97% 7ms 1.88% __GI___libc_read 0 0% 80.97% 6ms 1.61% KSP_PCApply (partial-inline) 0 0% 80.97% 6ms 1.61% dl_open_worker_begin 0 0% 80.97% 6ms 1.61% opal_hwloc_base_get_topology 0 0% 80.97% 6ms 1.61% orte_ess_base_proc_binding 0 0% 80.97% 5ms 1.34% PetscMemcpy (inline) 1ms 0.27% 81.23% 5ms 1.34% __ieee754_pow_fma 0 0% 81.23% 5ms 1.34% __pow 0 0% 81.23% 5ms 1.34% _dl_map_object 0 0% 81.23% 5ms 1.34% _dl_start_user 0 0% 81.23% 5ms 1.34% mca_base_framework_components_open 0 0% 81.23% 5ms 1.34% std::pow (inline) 0 0% 81.23% 4ms 1.07% PetscMemzero (inline) 0 0% 81.23% 4ms 1.07% VecSetType 1ms 0.27% 81.50% 4ms 1.07% __GI___libc_malloc 4ms 1.07% 82.57% 4ms 1.07% __memcpy_avx512_unaligned_erms 4ms 1.07% 83.65% 4ms 1.07% __memset_avx512_unaligned_erms 0 0% 83.65% 4ms 1.07% _dl_map_object_from_fd 4ms 1.07% 84.72% 4ms 1.07% _int_malloc 1ms 0.27% 84.99% 4ms 1.07% boost::serialization::singleton::get_instance 4ms 1.07% 86.06% 4ms 1.07% log_inline (inline) 0 0% 86.06% 4ms 1.07% mca_topo_base_dist_graph_neighbors_count 0 0% 86.06% 3ms 0.8% AbstractCardiacProblem::Initialise 0 0% 86.06% 3ms 0.8% KSPConvergedDefault 1ms 0.27% 86.33% 3ms 0.8% VecCreate 0 0% 86.33% 3ms 0.8% VecCreate_Seq 0 0% 86.33% 3ms 0.8% VecSet 0 0% 86.33% 3ms 0.8% VecSet_Seq (partial-inline) 0 0% 86.33% 3ms 0.8% XOpenDisplay 0 0% 86.33% 3ms 0.8% [hwloc_gl.so] 0 0% 86.33% 3ms 0.8% _XConnectXCB 1ms 0.27% 86.60% 3ms 0.8% __ieee754_exp_fma 3ms 0.8% 87.40% 3ms 0.8% __mmap64 3ms 0.8% 88.20% 3ms 0.8% __strlen_evex 0 0% 88.20% 3ms 0.8% _dl_map_object_deps 0 0% 88.20% 3ms 0.8% _dl_map_segments (inline) 0 0% 88.20% 3ms 0.8% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 88.20% 3ms 0.8% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.20% 3ms 0.8% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.20% 3ms 0.8% openaux 0 0% 88.20% 3ms 0.8% operator new 3ms 0.8% 89.01% 3ms 0.8% std::_Rb_tree_increment 0 0% 89.01% 3ms 0.8% xcb_connect_to_display_with_auth_info 0 0% 89.01% 2ms 0.54% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 89.01% 2ms 0.54% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 89.01% 2ms 0.54% BidomainSolver::SetupLinearSystem 0 0% 89.01% 2ms 0.54% CxxTest::RealWorldDescription::tearDown 0 0% 89.01% 2ms 0.54% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.27% 89.28% 2ms 0.54% KSP_RemoveNullSpace (inline) 0 0% 89.28% 2ms 0.54% PetscFinalize 0 0% 89.28% 2ms 0.54% PetscMallocA 0 0% 89.28% 2ms 0.54% PetscMallocAlign (partial-inline) 0 0% 89.28% 2ms 0.54% PetscSetup::tearDownWorld 0 0% 89.28% 2ms 0.54% PetscSetupUtils::CommonFinalize 0 0% 89.28% 2ms 0.54% VecCopy 0 0% 89.28% 2ms 0.54% VecCopy_Seq (partial-inline) 1ms 0.27% 89.54% 2ms 0.54% VecCreate_Seq_Private (partial-inline) 0 0% 89.54% 2ms 0.54% VecDestroy 0 0% 89.54% 2ms 0.54% VecTDot_MPI 0 0% 89.54% 2ms 0.54% VecXDot_MPI_Default (inline) 0 0% 89.54% 2ms 0.54% [hwloc_pci.so] 0 0% 89.54% 2ms 0.54% [libpciaccess.so.0.11.1] 0 0% 89.54% 2ms 0.54% [libxcb.so.1.1.0] 2ms 0.54% 90.08% 2ms 0.54% __GI___clock_nanosleep 2ms 0.54% 90.62% 2ms 0.54% __GI___getdents64 0 0% 90.62% 2ms 0.54% __GI___nanosleep 0 0% 90.62% 2ms 0.54% __GI___readdir64 0 0% 90.62% 2ms 0.54% __GI_exit 0 0% 90.62% 2ms 0.54% __GI_getaddrinfo 0 0% 90.62% 2ms 0.54% __cxa_finalize 2ms 0.54% 91.15% 2ms 0.54% __libc_connect 2ms 0.54% 91.69% 2ms 0.54% __libc_openat64 0 0% 91.69% 2ms 0.54% __run_exit_handlers 2ms 0.54% 92.23% 2ms 0.54% __strcmp_evex 0 0% 92.23% 2ms 0.54% _dl_call_fini 0 0% 92.23% 2ms 0.54% _dl_fini 0 0% 92.23% 2ms 0.54% _dl_fixup 0 0% 92.23% 2ms 0.54% _dl_lookup_symbol_x 0 0% 92.23% 2ms 0.54% _dl_runtime_resolve_xsavec 0 0% 92.23% 2ms 0.54% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 92.23% 2ms 0.54% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 92.23% 2ms 0.54% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 1ms 0.27% 92.49% 2ms 0.54% do_lookup_x 0 0% 92.49% 2ms 0.54% mca_base_component_var_register 0 0% 92.49% 2ms 0.54% mca_base_var_group_register 0 0% 92.49% 2ms 0.54% mca_base_var_register 0 0% 92.49% 2ms 0.54% ompi_mpi_finalize 0 0% 92.49% 2ms 0.54% opal_timer_base_get_freq 0 0% 92.49% 2ms 0.54% pci_get_strings 1ms 0.27% 92.76% 2ms 0.54% std::_Rb_tree::_M_get_insert_unique_pos (partial-inline) 0 0% 92.76% 2ms 0.54% std::__new_allocator::allocate (inline) 0 0% 92.76% 2ms 0.54% usleep