File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 92966ms, 91.95% of 101105ms total Dropped 1103 nodes (cum <= 505.52ms) flat flat% sum% cum cum% 0 0% 0% 101092ms 100% __libc_start_call_main 0 0% 0% 101092ms 100% __libc_start_main_impl 0 0% 0% 101092ms 100% _start 0 0% 0% 101090ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 101090ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 101090ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 101090ms 100% main 0 0% 0% 101047ms 99.94% CxxTest::RealTestDescription::run 0 0% 0% 101047ms 99.94% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 101047ms 99.94% CxxTest::TestRunner::runTest (inline) 0 0% 0% 101047ms 99.94% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 101047ms 99.94% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 101046ms 99.94% AbstractConvergenceTester::Converge 4ms 0.004% 0.004% 100121ms 99.03% AbstractCardiacProblem::Solve 7ms 0.0069% 0.011% 99450ms 98.36% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0059% 0.017% 56140ms 55.53% LinearSystem::Solve 3ms 0.003% 0.02% 55759ms 55.15% KSPSolve 7ms 0.0069% 0.027% 55758ms 55.15% KSPSolve_Private 12ms 0.012% 0.039% 55474ms 54.87% KSPSolve_SYMMLQ 256ms 0.25% 0.29% 35961ms 35.57% AbstractCardiacTissue::SolveCellSystems 2ms 0.002% 0.29% 31010ms 30.67% PCApply 1ms 0.00099% 0.29% 30996ms 30.66% PCApply_BJacobi_Singleblock 0 0% 0.29% 29390ms 29.07% KSPSolve_PREONLY (partial-inline) 4ms 0.004% 0.3% 28651ms 28.34% PCApply_ICC 3ms 0.003% 0.3% 28647ms 28.33% MatSolve 28330ms 28.02% 28.32% 28644ms 28.33% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 603ms 0.6% 28.92% 28075ms 27.77% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.003% 28.92% 26415ms 26.13% KSP_PCApply.lto_priv.18 6025ms 5.96% 34.88% 24886ms 24.61% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 4ms 0.004% 34.88% 19978ms 19.76% MatMult 233ms 0.23% 35.11% 19974ms 19.76% MatMult_SeqAIJ (partial-inline) 19594ms 19.38% 54.49% 19969ms 19.75% MatMult_SeqAIJ_Inode (inline) 1722ms 1.70% 56.20% 12882ms 12.74% CardiacNewtonSolver::Solve 4256ms 4.21% 60.41% 7639ms 7.56% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 110ms 0.11% 60.52% 6959ms 6.88% AbstractCardiacTissue::UpdateCaches (inline) 880ms 0.87% 61.39% 6824ms 6.75% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1392ms 1.38% 62.76% 6657ms 6.58% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 913ms 0.9% 63.67% 6480ms 6.41% BidomainSolver::SetupLinearSystem 0 0% 63.67% 5999ms 5.93% KSP_PCApply (partial-inline) 5736ms 5.67% 69.34% 5736ms 5.67% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 6ms 0.0059% 69.35% 5678ms 5.62% KSPConvergedDefault 3130ms 3.10% 72.44% 3202ms 3.17% __ieee754_log_fma 0 0% 72.44% 3148ms 3.11% boost::numeric::ublas::norm_inf (inline) 2227ms 2.20% 74.64% 3148ms 3.11% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.64% 3148ms 3.11% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.64% 3148ms 3.11% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2592ms 2.56% 77.21% 2592ms 2.56% ddot_ 33ms 0.033% 77.24% 2552ms 2.52% std::pow (inline) 309ms 0.31% 77.55% 2502ms 2.47% __pow 1576ms 1.56% 79.10% 2440ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3ms 0.003% 79.11% 2414ms 2.39% MatNullSpaceRemove 2206ms 2.18% 81.29% 2206ms 2.18% __memcpy_avx512_unaligned_erms 0 0% 81.29% 2177ms 2.15% PetscMemcpy (inline) 287ms 0.28% 81.57% 2160ms 2.14% __ieee754_pow_fma 2ms 0.002% 81.58% 2143ms 2.12% VecDot 0 0% 81.58% 2141ms 2.12% VecDot_Seq 3ms 0.003% 81.58% 2141ms 2.12% VecXDot_Seq_Private.constprop.0 18ms 0.018% 81.60% 1889ms 1.87% VecCopy 0 0% 81.60% 1868ms 1.85% VecCopy_Seq (partial-inline) 11ms 0.011% 81.61% 1833ms 1.81% VecAXPY 4ms 0.004% 81.61% 1822ms 1.80% VecAXPY_Seq 1804ms 1.78% 83.40% 1804ms 1.78% daxpy_ 1ms 0.00099% 83.40% 1578ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.003% 83.40% 1538ms 1.52% VecMDot 13ms 0.013% 83.41% 1535ms 1.52% VecMXDot_Private 1510ms 1.49% 84.91% 1517ms 1.50% VecMDot_Seq 13ms 0.013% 84.92% 1322ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1202ms 1.19% 86.11% 1236ms 1.22% exp_inline (inline) 0 0% 86.11% 1092ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.11% 913ms 0.9% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.11% 913ms 0.9% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.11% 913ms 0.9% boost_numeric_ublas_abs (inline) 913ms 0.9% 87.01% 913ms 0.9% std::abs (inline) 4ms 0.004% 87.01% 873ms 0.86% VecMAXPY 865ms 0.86% 87.87% 869ms 0.86% VecMAXPY_Seq 8ms 0.0079% 87.88% 856ms 0.85% boost::numeric::ublas::matrix_assign (inline) 174ms 0.17% 88.05% 837ms 0.83% boost::numeric::ublas::indexing_matrix_assign 540ms 0.53% 88.58% 821ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.58% 788ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.58% 788ms 0.78% CuboidMeshConstructor::Construct 1ms 0.00099% 88.59% 788ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 706ms 0.7% 89.28% 706ms 0.7% [libchaste_heart.so] 1ms 0.00099% 89.28% 702ms 0.69% Element::Element 4ms 0.004% 89.29% 694ms 0.69% AbstractTetrahedralElement::CalculateJacobian 693ms 0.69% 89.97% 693ms 0.69% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 5ms 0.0049% 89.98% 679ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.002% 89.98% 677ms 0.67% BidomainAssembler::ComputeMatrixTerm 5ms 0.0049% 89.99% 673ms 0.67% VecScale 2ms 0.002% 89.99% 668ms 0.66% VecScale_Seq 665ms 0.66% 90.65% 665ms 0.66% dscal_ 4ms 0.004% 90.65% 664ms 0.66% VecNorm 0 0% 90.65% 653ms 0.65% VecNorm_Seq 0 0% 90.65% 649ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00099% 90.65% 614ms 0.61% BidomainProblem::WriteOneStep 603ms 0.6% 91.25% 603ms 0.6% log_inline (inline) 3ms 0.003% 91.25% 592ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 178ms 0.18% 91.43% 588ms 0.58% AbstractBidomainSolver::CheckCompatibilityCondition 530ms 0.52% 91.95% 530ms 0.52% __memset_avx512_unaligned_erms 0 0% 91.95% 523ms 0.52% PetscMemzero (inline)