File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 122138ms, 91.92% of 132881ms total Dropped 1151 nodes (cum <= 664.40ms) flat flat% sum% cum cum% 0 0% 0% 132866ms 100% __libc_start_call_main 0 0% 0% 132866ms 100% __libc_start_main_impl 0 0% 0% 132866ms 100% _start 0 0% 0% 132862ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 132862ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 132862ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 132862ms 100% main 0 0% 0% 132820ms 100% CxxTest::RealTestDescription::run 0 0% 0% 132820ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 132820ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 132820ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 132820ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 132819ms 100% AbstractConvergenceTester::Converge 5ms 0.0038% 0.0038% 131613ms 99.05% AbstractCardiacProblem::Solve 4ms 0.003% 0.0068% 130768ms 98.41% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0023% 0.009% 72655ms 54.68% LinearSystem::Solve 2ms 0.0015% 0.011% 72044ms 54.22% KSPSolve 9ms 0.0068% 0.017% 72044ms 54.22% KSPSolve_Private 5ms 0.0038% 0.021% 71692ms 53.95% KSPSolve_SYMMLQ 457ms 0.34% 0.36% 48268ms 36.32% AbstractCardiacTissue::SolveCellSystems 2ms 0.0015% 0.37% 39783ms 29.94% PCApply 4ms 0.003% 0.37% 39764ms 29.92% PCApply_BJacobi_Singleblock 860ms 0.65% 1.02% 37748ms 28.41% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.003% 1.02% 37478ms 28.20% KSPSolve_PREONLY (partial-inline) 1ms 0.00075% 1.02% 36555ms 27.51% PCApply_ICC 8ms 0.006% 1.03% 36554ms 27.51% MatSolve 36093ms 27.16% 28.19% 36546ms 27.50% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0023% 28.19% 34037ms 25.61% KSP_PCApply.lto_priv.18 7991ms 6.01% 34.20% 33587ms 25.28% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.006% 34.21% 26139ms 19.67% MatMult 3921ms 2.95% 37.16% 26131ms 19.66% MatMult_SeqAIJ (partial-inline) 22007ms 16.56% 53.72% 22462ms 16.90% MatMult_SeqAIJ_Inode (inline) 2085ms 1.57% 55.29% 16764ms 12.62% CardiacNewtonSolver::Solve 1239ms 0.93% 56.22% 10124ms 7.62% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5594ms 4.21% 60.43% 10070ms 7.58% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 180ms 0.14% 60.57% 9007ms 6.78% AbstractCardiacTissue::UpdateCaches (inline) 1144ms 0.86% 61.43% 8611ms 6.48% BidomainSolver::SetupLinearSystem 1822ms 1.37% 62.80% 8611ms 6.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 8588ms 6.46% 69.26% 8588ms 6.46% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 69.26% 7368ms 5.54% KSP_PCApply (partial-inline) 6ms 0.0045% 69.27% 7027ms 5.29% KSPConvergedDefault 4193ms 3.16% 72.42% 4290ms 3.23% __ieee754_log_fma 0 0% 72.42% 4124ms 3.10% boost::numeric::ublas::norm_inf (inline) 2873ms 2.16% 74.59% 4124ms 3.10% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.59% 4124ms 3.10% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.59% 4124ms 3.10% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3554ms 2.67% 77.26% 3554ms 2.67% ddot_ 34ms 0.026% 77.29% 3207ms 2.41% std::pow (inline) 409ms 0.31% 77.59% 3170ms 2.39% __pow 3151ms 2.37% 79.97% 3151ms 2.37% __memcpy_avx_unaligned_erms 0 0% 79.97% 3114ms 2.34% PetscMemcpy (inline) 2022ms 1.52% 81.49% 3112ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 7ms 0.0053% 81.49% 2960ms 2.23% VecDot 1ms 0.00075% 81.49% 2953ms 2.22% VecDot_Seq 3ms 0.0023% 81.50% 2952ms 2.22% VecXDot_Seq_Private.constprop.0 4ms 0.003% 81.50% 2941ms 2.21% MatNullSpaceRemove 380ms 0.29% 81.78% 2724ms 2.05% __ieee754_pow_fma 15ms 0.011% 81.80% 2685ms 2.02% VecCopy 1ms 0.00075% 81.80% 2665ms 2.01% VecCopy_Seq (partial-inline) 14ms 0.011% 81.81% 2521ms 1.90% VecAXPY 3ms 0.0023% 81.81% 2507ms 1.89% VecAXPY_Seq 2486ms 1.87% 83.68% 2486ms 1.87% daxpy_ 0 0% 83.68% 2023ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0015% 83.68% 1849ms 1.39% VecMDot 10ms 0.0075% 83.69% 1847ms 1.39% VecMXDot_Private 1829ms 1.38% 85.07% 1833ms 1.38% VecMDot_Seq 21ms 0.016% 85.08% 1677ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1552ms 1.17% 86.25% 1609ms 1.21% exp_inline (inline) 0 0% 86.25% 1399ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.25% 1237ms 0.93% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.25% 1237ms 0.93% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.25% 1237ms 0.93% boost_numeric_ublas_abs (inline) 1237ms 0.93% 87.18% 1237ms 0.93% std::abs (inline) 772ms 0.58% 87.76% 1103ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 7ms 0.0053% 87.77% 1093ms 0.82% boost::numeric::ublas::matrix_assign (inline) 3ms 0.0023% 87.77% 1088ms 0.82% VecMAXPY 1081ms 0.81% 88.58% 1085ms 0.82% VecMAXPY_Seq 225ms 0.17% 88.75% 1080ms 0.81% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.75% 1019ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.75% 1019ms 0.77% CuboidMeshConstructor::Construct 3ms 0.0023% 88.75% 1019ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.003% 88.76% 947ms 0.71% VecNorm 4ms 0.003% 88.76% 939ms 0.71% VecNorm_Seq 1ms 0.00075% 88.76% 893ms 0.67% Element::Element 4ms 0.003% 88.76% 890ms 0.67% BidomainAssembler::ComputeMatrixTerm 3ms 0.0023% 88.77% 884ms 0.67% AbstractTetrahedralElement::CalculateJacobian 876ms 0.66% 89.43% 876ms 0.66% [libchaste_heart.so] 8ms 0.006% 89.43% 871ms 0.66% VecScale 3ms 0.0023% 89.43% 863ms 0.65% VecScale_Seq 858ms 0.65% 90.08% 858ms 0.65% dscal_ 3ms 0.0023% 90.08% 855ms 0.64% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00075% 90.08% 847ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 268ms 0.2% 90.28% 844ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0023% 90.29% 833ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 90.29% 784ms 0.59% BidomainProblem::WriteOneStep 753ms 0.57% 90.85% 753ms 0.57% __memset_avx2_unaligned_erms 0 0% 90.85% 746ms 0.56% PetscMemzero (inline) 722ms 0.54% 91.40% 722ms 0.54% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 687ms 0.52% 91.91% 687ms 0.52% log_inline (inline) 3ms 0.0023% 91.92% 679ms 0.51% VecDuplicate