File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 14469ms, 85.42% of 16939ms total Dropped 774 nodes (cum <= 84.69ms) flat flat% sum% cum cum% 0 0% 0% 16930ms 99.95% __libc_start_call_main 0 0% 0% 16930ms 99.95% __libc_start_main_impl 0 0% 0% 16930ms 99.95% _start 0 0% 0% 16926ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 16926ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 16926ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 16926ms 99.92% main 0 0% 0% 16885ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 16884ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 16884ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 16861ms 99.54% AbstractCardiacProblem::Solve 4ms 0.024% 0.024% 13271ms 78.35% AbstractDynamicLinearPdeSolver::Solve 88ms 0.52% 0.54% 10672ms 63.00% AbstractCardiacTissue::SolveCellSystems 101ms 0.6% 1.14% 6751ms 39.85% AbstractCardiacCell::ComputeExceptVoltage 111ms 0.66% 1.79% 6099ms 36.01% AbstractOneStepIvpOdeSolver::InternalSolve 157ms 0.93% 2.72% 5426ms 32.03% EulerIvpOdeSolver::CalculateNextYValue 1796ms 10.60% 13.32% 5276ms 31.15% __GI___exp 897ms 5.30% 18.62% 5226ms 30.85% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 18.62% 3527ms 20.82% MonodomainProblem::WriteOneStep 0 0% 18.62% 3372ms 19.91% Hdf5DataWriter::PutVector 4ms 0.024% 18.64% 3364ms 19.86% H5Dwrite 3061ms 18.07% 36.71% 3351ms 19.78% __ieee754_exp_fma 1ms 0.0059% 36.72% 3332ms 19.67% H5D__write 150ms 0.89% 37.61% 3278ms 19.35% AbstractCardiacTissue::UpdateCaches (inline) 834ms 4.92% 42.53% 3092ms 18.25% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0059% 42.53% 1980ms 11.69% H5D__chunk_collective_write 14ms 0.083% 42.62% 1979ms 11.68% H5F_set_coll_metadata_reads 24ms 0.14% 42.76% 1752ms 10.34% H5FD_s3comms_uriencode 2ms 0.012% 42.77% 1718ms 10.14% LinearSystem::Solve 1ms 0.0059% 42.78% 1619ms 9.56% KSPSolve 5ms 0.03% 42.81% 1618ms 9.55% KSPSolve_Private 2ms 0.012% 42.82% 1611ms 9.51% KSPSolve_CG 45ms 0.27% 43.08% 1353ms 7.99% 1ms 0.0059% 43.09% 1337ms 7.89% H5F_block_write 3ms 0.018% 43.11% 1336ms 7.89% H5PB_write 1ms 0.0059% 43.11% 1333ms 7.87% H5F__accum_write 1ms 0.0059% 43.12% 1332ms 7.86% H5FD_write 0 0% 43.12% 1230ms 7.26% H5D__mpio_select_write 10ms 0.059% 43.18% 1214ms 7.17% H5D__chunk_cacheable 0 0% 43.18% 1120ms 6.61% PMPI_File_write_at_all 1095ms 6.46% 49.64% 1099ms 6.49% __GI_pwritev64 345ms 2.04% 51.68% 1044ms 6.16% H5S_select_iterate 3ms 0.018% 51.70% 1044ms 6.16% std::pow (inline) 89ms 0.53% 52.22% 1040ms 6.14% __pow 89ms 0.53% 52.75% 947ms 5.59% __ieee754_pow_fma 2ms 0.012% 52.76% 920ms 5.43% PCApply 2ms 0.012% 52.77% 917ms 5.41% PCApply_BJacobi_Singleblock 0 0% 52.77% 880ms 5.20% KSPSolve_PREONLY 5ms 0.03% 52.80% 876ms 5.17% MatSolve 0 0% 52.80% 876ms 5.17% PCApply_ICC 859ms 5.07% 57.87% 871ms 5.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 410ms 2.42% 60.29% 849ms 5.01% MonodomainSolver::SetupLinearSystem 76ms 0.45% 60.74% 708ms 4.18% H5D__chunk_set_sizes 2ms 0.012% 60.75% 635ms 3.75% MatMult 2ms 0.012% 60.77% 634ms 3.74% KSP_PCApply.lto_priv.7 631ms 3.73% 64.49% 633ms 3.74% MatMult_SeqAIJ 60ms 0.35% 64.84% 506ms 2.99% H5S_mpio_space_type 502ms 2.96% 67.81% 502ms 2.96% log_inline (inline) 201ms 1.19% 68.99% 364ms 2.15% CellLuoRudy1991FromCellML::VerifyStateVariables 4ms 0.024% 69.02% 360ms 2.13% KSPConvergedDefault 308ms 1.82% 70.84% 317ms 1.87% exp_inline (inline) 0 0% 70.84% 291ms 1.72% KSP_PCApply 114ms 0.67% 71.51% 241ms 1.42% TimeStepper::TimeStepper 13ms 0.077% 71.59% 238ms 1.41% H5VM_chunk_index 190ms 1.12% 72.71% 221ms 1.30% top12 (inline) 51ms 0.3% 73.01% 212ms 1.25% __GI___libc_malloc 54ms 0.32% 73.33% 211ms 1.25% AbstractCardiacCell::SetVoltage (partial-inline) 146ms 0.86% 74.19% 186ms 1.10% _int_malloc 12ms 0.071% 74.26% 183ms 1.08% ompi_datatype_create 177ms 1.04% 75.31% 177ms 1.04% ddot_ 33ms 0.19% 75.50% 172ms 1.02% __GI___libc_free 169ms 1% 76.50% 169ms 1% [libchaste_heart.so] 26ms 0.15% 76.65% 164ms 0.97% H5S_set_version 8ms 0.047% 76.70% 163ms 0.96% ompi_datatype_destroy 6ms 0.035% 76.73% 160ms 0.94% MPI_Type_free 0 0% 76.73% 155ms 0.92% Hdf5DataWriter::PutUnlimitedVariable 148ms 0.87% 77.61% 148ms 0.87% asuint64 (inline) 50ms 0.3% 77.90% 138ms 0.81% H5VM_array_calc 32ms 0.19% 78.09% 138ms 0.81% ompi_datatype_release_args 4ms 0.024% 78.12% 138ms 0.81% ompi_info_register_framework_params 116ms 0.68% 78.80% 137ms 0.81% AbstractParameterisedSystem::SetAnyVariable 45ms 0.27% 79.07% 137ms 0.81% _int_free 134ms 0.79% 79.86% 134ms 0.79% TimeStepper::CalculateNextTime 134ms 0.79% 80.65% 134ms 0.79% [libm.so.6] 94ms 0.55% 81.20% 132ms 0.78% AbstractOneStepIvpOdeSolver::Solve 130ms 0.77% 81.97% 130ms 0.77% __memcpy_avx_unaligned_erms 1ms 0.0059% 81.98% 129ms 0.76% PMPI_File_set_view 105ms 0.62% 82.60% 127ms 0.75% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 126ms 0.74% 83.34% 126ms 0.74% H5VM_chunk_index_scaled 64ms 0.38% 83.72% 121ms 0.71% H5S_hyper_add_span_element 55ms 0.32% 84.04% 117ms 0.69% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 4ms 0.024% 84.07% 111ms 0.66% PMPI_Type_create_resized 108ms 0.64% 84.70% 108ms 0.64% __ieee754_log_fma 0 0% 84.70% 107ms 0.63% VecTDot 0 0% 84.70% 107ms 0.63% VecTDot_Seq 1ms 0.0059% 84.71% 107ms 0.63% VecXDot_Seq_Private.constprop.0 3ms 0.018% 84.73% 107ms 0.63% ompi_datatype_duplicate 101ms 0.6% 85.32% 101ms 0.6% H5VM_array_offset_pre 1ms 0.0059% 85.33% 98ms 0.58% VecNorm 2ms 0.012% 85.34% 93ms 0.55% VecNorm_Seq 7ms 0.041% 85.38% 91ms 0.54% PMPI_Type_vector 6ms 0.035% 85.42% 87ms 0.51% H5D__chunk_lookup