File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 391ms, 89.07% of 439ms total Dropped 193 nodes (cum <= 2.19ms) flat flat% sum% cum cum% 0 0% 0% 433ms 98.63% __libc_start_call_main 0 0% 0% 433ms 98.63% __libc_start_main_impl 0 0% 0% 433ms 98.63% _start 0 0% 0% 430ms 97.95% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 430ms 97.95% CxxTest::TestRunner::runAllTests 0 0% 0% 430ms 97.95% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 430ms 97.95% main 0 0% 0% 393ms 89.52% CxxTest::RealTestDescription::run 0 0% 0% 393ms 89.52% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 393ms 89.52% CxxTest::TestRunner::runTest (inline) 0 0% 0% 393ms 89.52% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 393ms 89.52% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 389ms 88.61% AbstractCardiacProblem::Solve 0 0% 0% 388ms 88.38% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 351ms 79.95% KSPSolve 0 0% 0% 351ms 79.95% KSPSolve_Private 0 0% 0% 351ms 79.95% LinearSystem::Solve 0 0% 0% 349ms 79.50% KSPSolve_CG 0 0% 0% 202ms 46.01% KSP_PCApply.lto_priv.7 0 0% 0% 187ms 42.60% PCApply 0 0% 0% 187ms 42.60% PCApply_BJacobi_Singleblock 0 0% 0% 152ms 34.62% KSPSolve_PREONLY (partial-inline) 0 0% 0% 141ms 32.12% MatSolve 140ms 31.89% 31.89% 141ms 32.12% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 31.89% 141ms 32.12% PCApply_ICC 0 0% 31.89% 86ms 19.59% MatMult 2ms 0.46% 32.35% 86ms 19.59% MatMult_SeqAIJ (partial-inline) 84ms 19.13% 51.48% 86ms 19.59% MatMult_SeqAIJ_Inode (inline) 42ms 9.57% 61.05% 42ms 9.57% ddot_ 1ms 0.23% 61.28% 39ms 8.88% MatNullSpaceRemove 0 0% 61.28% 34ms 7.74% CxxTest::RealWorldDescription::setUp 0 0% 61.28% 34ms 7.74% PMPI_Init_thread 0 0% 61.28% 34ms 7.74% PetscInitialize 0 0% 61.28% 34ms 7.74% PetscSetup::setUpWorld 0 0% 61.28% 34ms 7.74% PetscSetupUtils::CommonSetup 0 0% 61.28% 34ms 7.74% PetscSetupUtils::InitialisePetsc 0 0% 61.28% 34ms 7.74% ompi_mpi_init 1ms 0.23% 61.50% 32ms 7.29% AbstractCardiacTissue::SolveCellSystems 0 0% 61.50% 25ms 5.69% VecTDot 0 0% 61.50% 25ms 5.69% VecTDot_Seq 0 0% 61.50% 25ms 5.69% VecXDot_Seq_Private.constprop.0 0 0% 61.50% 24ms 5.47% 0 0% 61.50% 23ms 5.24% orte_init 0 0% 61.50% 22ms 5.01% VecMDot 1ms 0.23% 61.73% 22ms 5.01% VecMXDot_Private 21ms 4.78% 66.51% 21ms 4.78% VecMDot_Seq 0 0% 66.51% 17ms 3.87% VecNorm 0 0% 66.51% 17ms 3.87% VecNorm_Seq 0 0% 66.51% 16ms 3.64% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.51% 16ms 3.64% VecMAXPY 15ms 3.42% 69.93% 16ms 3.64% VecMAXPY_Seq 1ms 0.23% 70.16% 15ms 3.42% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 70.16% 15ms 3.42% VecDuplicate 0 0% 70.16% 14ms 3.19% VecDuplicate_Seq 0 0% 70.16% 14ms 3.19% __GI__dl_catch_exception 0 0% 70.16% 14ms 3.19% _dl_catch_error 0 0% 70.16% 14ms 3.19% _dlerror_run 0 0% 70.16% 14ms 3.19% hwloc_topology_load 0 0% 70.16% 13ms 2.96% KSP_PCApply (partial-inline) 4ms 0.91% 71.07% 13ms 2.96% __GI___exp 0 0% 71.07% 13ms 2.96% hwloc_linux_get_tid_last_cpu_location 0 0% 71.07% 13ms 2.96% opal_stackframe_output 4ms 0.91% 71.98% 12ms 2.73% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.98% 12ms 2.73% EulerIvpOdeSolver::CalculateNextYValue 0 0% 71.98% 12ms 2.73% VecAYPX 12ms 2.73% 74.72% 12ms 2.73% VecAYPX_Seq 0 0% 74.72% 11ms 2.51% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.68% 75.40% 11ms 2.51% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.23% 75.63% 11ms 2.51% VecCreate 0 0% 75.63% 11ms 2.51% mca_base_framework_open 0 0% 75.63% 10ms 2.28% ___dlopen 0 0% 75.63% 10ms 2.28% _dl_open 0 0% 75.63% 10ms 2.28% dl_open_worker 0 0% 75.63% 10ms 2.28% dl_open_worker_begin 0 0% 75.63% 10ms 2.28% dlopen_doit 0 0% 75.63% 10ms 2.28% dlopen_implementation (inline) 0 0% 75.63% 10ms 2.28% mca_base_framework_register 9ms 2.05% 77.68% 9ms 2.05% __ieee754_exp_fma 0 0% 77.68% 9ms 2.05% mca_base_component_find 0 0% 77.68% 9ms 2.05% mca_base_component_repository_open 0 0% 77.68% 9ms 2.05% mca_base_framework_components_register 0 0% 77.68% 7ms 1.59% VecAXPY 0 0% 77.68% 7ms 1.59% VecAXPY_Seq 7ms 1.59% 79.27% 7ms 1.59% daxpy_ 0 0% 79.27% 6ms 1.37% PetscMallocA 0 0% 79.27% 6ms 1.37% PetscMallocAlign (partial-inline) 0 0% 79.27% 6ms 1.37% PetscMemzero (inline) 2ms 0.46% 79.73% 6ms 1.37% __GI___libc_malloc 6ms 1.37% 81.09% 6ms 1.37% __memset_avx2_unaligned_erms 0 0% 81.09% 6ms 1.37% _dl_init 0 0% 81.09% 6ms 1.37% _dl_lookup_symbol_x 0 0% 81.09% 6ms 1.37% _dl_map_object 0 0% 81.09% 6ms 1.37% _dl_start_user 0 0% 81.09% 6ms 1.37% call_init (inline) 0 0% 81.09% 6ms 1.37% orte_ess_base_proc_binding 0 0% 81.09% 5ms 1.14% BidomainSolver::SetupLinearSystem 0 0% 81.09% 5ms 1.14% PetscHeaderCreate_Private 0 0% 81.09% 5ms 1.14% VecCreate_Seq 0 0% 81.09% 5ms 1.14% VecSetType 5ms 1.14% 82.23% 5ms 1.14% __memcpy_avx_unaligned_erms 0 0% 82.23% 5ms 1.14% opal_hwloc_base_get_topology 3ms 0.68% 82.92% 4ms 0.91% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 82.92% 4ms 0.91% PetscMemcpy (inline) 1ms 0.23% 83.14% 4ms 0.91% __GI___libc_free 4ms 0.91% 84.05% 4ms 0.91% __GI___libc_read 0 0% 84.05% 4ms 0.91% __dlclose 0 0% 84.05% 4ms 0.91% __posix_memalign 0 0% 84.05% 4ms 0.91% _dl_close 1ms 0.23% 84.28% 4ms 0.91% _dl_close_worker (inline) 0 0% 84.28% 4ms 0.91% _dl_fixup 1ms 0.23% 84.51% 4ms 0.91% _dl_map_object_from_fd 0 0% 84.51% 4ms 0.91% _dl_open_relocate_one_object (inline) 0 0% 84.51% 4ms 0.91% _dl_relocate_object 0 0% 84.51% 4ms 0.91% _dl_runtime_resolve_xsavec 3ms 0.68% 85.19% 4ms 0.91% _int_malloc 0 0% 85.19% 4ms 0.91% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 85.19% 4ms 0.91% boost::serialization::singleton::get_instance 3ms 0.68% 85.88% 4ms 0.91% do_lookup_x 0 0% 85.88% 4ms 0.91% elf_dynamic_do_Rela (inline) 0 0% 85.88% 4ms 0.91% elf_machine_rela (inline) 0 0% 85.88% 4ms 0.91% mca_base_component_repository_release 0 0% 85.88% 4ms 0.91% mca_base_components_close 2ms 0.46% 86.33% 4ms 0.91% resolve_map (inline) 0 0% 86.33% 3ms 0.68% AbstractCardiacProblem::Initialise 0 0% 86.33% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 86.33% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 86.33% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.33% 3ms 0.68% PMPI_Comm_get_attr 0 0% 86.33% 3ms 0.68% PetscFinalize 0 0% 86.33% 3ms 0.68% PetscLayoutSetUp 0 0% 86.33% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 86.33% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 86.33% 3ms 0.68% VecCopy 0 0% 86.33% 3ms 0.68% VecCopy_Seq (partial-inline) 0 0% 86.33% 3ms 0.68% VecCreate_Seq_Private 0 0% 86.33% 3ms 0.68% VecDestroy 0 0% 86.33% 3ms 0.68% VecSet 0 0% 86.33% 3ms 0.68% VecSet_Seq (partial-inline) 0 0% 86.33% 3ms 0.68% XOpenDisplay 0 0% 86.33% 3ms 0.68% [hwloc_gl.so] 0 0% 86.33% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 86.33% 3ms 0.68% _XConnectXCB 0 0% 86.33% 3ms 0.68% __GI_exit 1ms 0.23% 86.56% 3ms 0.68% __cxa_finalize 0 0% 86.56% 3ms 0.68% __ieee754_pow_fma 3ms 0.68% 87.24% 3ms 0.68% __libc_connect 3ms 0.68% 87.93% 3ms 0.68% __mmap64 0 0% 87.93% 3ms 0.68% __pow 0 0% 87.93% 3ms 0.68% __run_exit_handlers 0 0% 87.93% 3ms 0.68% _dl_call_fini 0 0% 87.93% 3ms 0.68% _dl_fini 0 0% 87.93% 3ms 0.68% _dl_map_segments (inline) 3ms 0.68% 88.61% 3ms 0.68% _int_free 0 0% 88.61% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.61% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.61% 3ms 0.68% mca_base_framework_close 2ms 0.46% 89.07% 3ms 0.68% ompi_attr_get_c 0 0% 89.07% 3ms 0.68% ompi_mpi_finalize 0 0% 89.07% 3ms 0.68% std::pow (inline) 0 0% 89.07% 3ms 0.68% xcb_connect_to_display_with_auth_info