File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108396ms, 91.82% of 118048ms total Dropped 1092 nodes (cum <= 590.24ms) flat flat% sum% cum cum% 0 0% 0% 118036ms 100% __libc_start_call_main 0 0% 0% 118036ms 100% __libc_start_main_impl 0 0% 0% 118036ms 100% _start 0 0% 0% 118033ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118033ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118033ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118033ms 100% main 0 0% 0% 117998ms 100% AbstractConvergenceTester::Converge 0 0% 0% 117998ms 100% CxxTest::RealTestDescription::run 0 0% 0% 117998ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 117998ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 117998ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 117998ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0059% 0.0059% 116720ms 98.88% AbstractCardiacProblem::Solve 11ms 0.0093% 0.015% 115940ms 98.21% AbstractDynamicLinearPdeSolver::Solve 8ms 0.0068% 0.022% 64471ms 54.61% LinearSystem::Solve 5ms 0.0042% 0.026% 64047ms 54.26% KSPSolve 10ms 0.0085% 0.035% 64045ms 54.25% KSPSolve_Private 11ms 0.0093% 0.044% 63650ms 53.92% KSPSolve_SYMMLQ 229ms 0.19% 0.24% 42775ms 36.24% AbstractCardiacTissue::SolveCellSystems 9ms 0.0076% 0.25% 36715ms 31.10% PCApply 2ms 0.0017% 0.25% 36706ms 31.09% PCApply_BJacobi_Singleblock 2ms 0.0017% 0.25% 34420ms 29.16% KSPSolve_PREONLY (partial-inline) 3ms 0.0025% 0.25% 33275ms 28.19% PCApply_ICC 7ms 0.0059% 0.26% 33272ms 28.19% MatSolve 32806ms 27.79% 28.05% 33265ms 28.18% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1318ms 1.12% 29.16% 32764ms 27.75% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00085% 29.17% 31628ms 26.79% KSP_PCApply.lto_priv.18 6929ms 5.87% 35.03% 28384ms 24.04% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0076% 35.04% 21203ms 17.96% MatMult 295ms 0.25% 35.29% 21194ms 17.95% MatMult_SeqAIJ (partial-inline) 20656ms 17.50% 52.79% 21192ms 17.95% MatMult_SeqAIJ_Inode (inline) 2026ms 1.72% 54.51% 14685ms 12.44% CardiacNewtonSolver::Solve 327ms 0.28% 54.78% 9184ms 7.78% AbstractCardiacTissue::UpdateCaches (inline) 2053ms 1.74% 56.52% 8674ms 7.35% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4419ms 3.74% 60.27% 8633ms 7.31% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1087ms 0.92% 61.19% 7658ms 6.49% BidomainSolver::SetupLinearSystem 1198ms 1.01% 62.20% 7291ms 6.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00085% 62.20% 7115ms 6.03% KSP_PCApply (partial-inline) 5ms 0.0042% 62.21% 6517ms 5.52% KSPConvergedDefault 5807ms 4.92% 67.13% 5807ms 4.92% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3906ms 3.31% 70.43% 3940ms 3.34% __ieee754_log_fma 0 0% 70.43% 3634ms 3.08% boost::numeric::ublas::norm_inf (inline) 2475ms 2.10% 72.53% 3634ms 3.08% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.53% 3634ms 3.08% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.53% 3634ms 3.08% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0059% 72.54% 3376ms 2.86% MatNullSpaceRemove 34ms 0.029% 72.57% 3273ms 2.77% std::pow (inline) 392ms 0.33% 72.90% 3234ms 2.74% __pow 2957ms 2.50% 75.40% 2957ms 2.50% __memcpy_avx_unaligned_erms 0 0% 75.40% 2921ms 2.47% PetscMemcpy (inline) 1729ms 1.46% 76.87% 2872ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 385ms 0.33% 77.19% 2832ms 2.40% __ieee754_pow_fma 2731ms 2.31% 79.51% 2731ms 2.31% ddot_ 20ms 0.017% 79.52% 2499ms 2.12% VecCopy 3ms 0.0025% 79.53% 2475ms 2.10% VecCopy_Seq (partial-inline) 13ms 0.011% 79.54% 2462ms 2.09% VecAXPY 3ms 0.0025% 79.54% 2449ms 2.07% VecAXPY_Seq 2435ms 2.06% 81.60% 2435ms 2.06% daxpy_ 3ms 0.0025% 81.61% 2209ms 1.87% VecDot 0 0% 81.61% 2206ms 1.87% VecDot_Seq 0 0% 81.61% 2206ms 1.87% VecXDot_Seq_Private.constprop.0 2ms 0.0017% 81.61% 2060ms 1.75% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0034% 81.61% 1931ms 1.64% VecMDot 13ms 0.011% 81.62% 1927ms 1.63% VecMXDot_Private 1907ms 1.62% 83.24% 1912ms 1.62% VecMDot_Seq 37ms 0.031% 83.27% 1721ms 1.46% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1591ms 1.35% 84.62% 1650ms 1.40% exp_inline (inline) 1484ms 1.26% 85.87% 1484ms 1.26% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 5ms 0.0042% 85.88% 1438ms 1.22% VecMAXPY 1427ms 1.21% 87.09% 1433ms 1.21% VecMAXPY_Seq 0 0% 87.09% 1418ms 1.20% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 87.09% 1128ms 0.96% CuboidMeshConstructor::Construct 0 0% 87.09% 1127ms 0.95% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00085% 87.09% 1127ms 0.95% DistributedTetrahedralMesh::ConstructCuboid 851ms 0.72% 87.81% 1100ms 0.93% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 8ms 0.0068% 87.82% 1093ms 0.93% boost::numeric::ublas::matrix_assign (inline) 206ms 0.17% 87.99% 1078ms 0.91% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.99% 1063ms 0.9% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.99% 1063ms 0.9% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.99% 1063ms 0.9% boost_numeric_ublas_abs (inline) 1063ms 0.9% 88.89% 1063ms 0.9% std::abs (inline) 3ms 0.0025% 88.89% 1018ms 0.86% Element::Element 2ms 0.0017% 88.89% 1000ms 0.85% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0034% 88.90% 950ms 0.8% AbstractTetrahedralElement::AbstractTetrahedralElement 935ms 0.79% 89.69% 935ms 0.79% __memset_avx2_unaligned_erms 0 0% 89.69% 919ms 0.78% PetscMemzero (inline) 9ms 0.0076% 89.70% 861ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 4ms 0.0034% 89.70% 842ms 0.71% BidomainAssembler::ComputeMatrixTerm 826ms 0.7% 90.40% 826ms 0.7% [libchaste_heart.so] 0 0% 90.40% 788ms 0.67% VecDuplicate 754ms 0.64% 91.04% 754ms 0.64% log_inline (inline) 5ms 0.0042% 91.04% 753ms 0.64% VecScale 3ms 0.0025% 91.05% 748ms 0.63% VecScale_Seq 745ms 0.63% 91.68% 745ms 0.63% dscal_ 1ms 0.00085% 91.68% 740ms 0.63% VecNorm 1ms 0.00085% 91.68% 732ms 0.62% VecNorm_Seq 2ms 0.0017% 91.68% 724ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 152ms 0.13% 91.81% 722ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.81% 716ms 0.61% BidomainProblem::WriteOneStep 8ms 0.0068% 91.82% 670ms 0.57% PetscMallocA 9ms 0.0076% 91.82% 662ms 0.56% PetscMallocAlign (partial-inline) 0 0% 91.82% 642ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)