File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12085ms, 84.77% of 14256ms total Dropped 708 nodes (cum <= 71.28ms) flat flat% sum% cum cum% 0 0% 0% 14249ms 100% __libc_start_call_main 0 0% 0% 14249ms 100% __libc_start_main_impl 0 0% 0% 14249ms 100% _start 0 0% 0% 14246ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14246ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14246ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14246ms 99.93% main 0 0% 0% 14213ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14213ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14213ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14191ms 99.54% AbstractCardiacProblem::Solve 1ms 0.007% 0.021% 11162ms 78.30% AbstractDynamicLinearPdeSolver::Solve 35ms 0.25% 0.27% 8668ms 60.80% AbstractCardiacTissue::SolveCellSystems 98ms 0.69% 0.95% 5457ms 38.28% AbstractCardiacCell::ComputeExceptVoltage 70ms 0.49% 1.45% 4738ms 33.24% AbstractOneStepIvpOdeSolver::InternalSolve 126ms 0.88% 2.33% 4066ms 28.52% EulerIvpOdeSolver::CalculateNextYValue 925ms 6.49% 8.82% 3888ms 27.27% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1712ms 12.01% 20.83% 3535ms 24.80% __GI___exp 2ms 0.014% 20.84% 2966ms 20.81% MonodomainProblem::WriteOneStep 6ms 0.042% 20.88% 2815ms 19.75% Hdf5DataWriter::PutVector 2ms 0.014% 20.90% 2781ms 19.51% H5Dwrite 3ms 0.021% 20.92% 2753ms 19.31% H5D__write 62ms 0.43% 21.35% 2638ms 18.50% AbstractCardiacTissue::UpdateCaches (inline) 808ms 5.67% 27.02% 2534ms 17.77% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.02% 1824ms 12.79% H5D__chunk_collective_write 29ms 0.2% 27.22% 1824ms 12.79% H5F_set_coll_metadata_reads 1573ms 11.03% 38.26% 1748ms 12.26% __ieee754_exp_fma 1ms 0.007% 38.26% 1711ms 12.00% LinearSystem::Solve 11ms 0.077% 38.34% 1584ms 11.11% H5FD_s3comms_uriencode 1ms 0.007% 38.35% 1572ms 11.03% KSPSolve 3ms 0.021% 38.37% 1571ms 11.02% KSPSolve_Private 0 0% 38.37% 1560ms 10.94% KSPSolve_CG 50ms 0.35% 38.72% 1222ms 8.57% 1ms 0.007% 38.73% 1222ms 8.57% H5F_block_write 1ms 0.007% 38.73% 1221ms 8.56% H5PB_write 0 0% 38.73% 1220ms 8.56% H5FD_write 0 0% 38.73% 1220ms 8.56% H5F__accum_write 2ms 0.014% 38.75% 1145ms 8.03% H5D__mpio_select_write 0 0% 38.75% 1060ms 7.44% PMPI_File_write_at_all 1021ms 7.16% 45.91% 1023ms 7.18% __GI_pwritev64 16ms 0.11% 46.02% 906ms 6.36% std::pow (inline) 70ms 0.49% 46.51% 890ms 6.24% __pow 1ms 0.007% 46.52% 875ms 6.14% PCApply 1ms 0.007% 46.53% 870ms 6.10% PCApply_BJacobi_Singleblock 3ms 0.021% 46.55% 836ms 5.86% H5D__chunk_cacheable 0 0% 46.55% 822ms 5.77% KSPSolve_PREONLY 114ms 0.8% 47.35% 818ms 5.74% __ieee754_pow_fma 1ms 0.007% 47.36% 817ms 5.73% PCApply_ICC 1ms 0.007% 47.36% 816ms 5.72% MatSolve 806ms 5.65% 53.02% 815ms 5.72% MatSolve_SeqSBAIJ_1_NaturalOrdering 368ms 2.58% 55.60% 767ms 5.38% MonodomainSolver::SetupLinearSystem 252ms 1.77% 57.37% 651ms 4.57% H5S_select_iterate 2ms 0.014% 57.38% 621ms 4.36% KSP_PCApply.lto_priv.7 5ms 0.035% 57.41% 604ms 4.24% MatMult 597ms 4.19% 61.60% 599ms 4.20% MatMult_SeqAIJ 43ms 0.3% 61.90% 449ms 3.15% H5S_mpio_space_type 41ms 0.29% 62.19% 425ms 2.98% H5D__chunk_set_sizes 227ms 1.59% 63.78% 417ms 2.93% CellLuoRudy1991FromCellML::VerifyStateVariables 394ms 2.76% 66.55% 394ms 2.76% log_inline (inline) 3ms 0.021% 66.57% 341ms 2.39% KSPConvergedDefault 293ms 2.06% 68.62% 293ms 2.06% exp_inline (inline) 0 0% 68.62% 258ms 1.81% KSP_PCApply 117ms 0.82% 69.44% 237ms 1.66% TimeStepper::TimeStepper 40ms 0.28% 69.73% 196ms 1.37% __GI___libc_malloc 100ms 0.7% 70.43% 187ms 1.31% top12 (inline) 150ms 1.05% 71.48% 183ms 1.28% _int_malloc 94ms 0.66% 72.14% 179ms 1.26% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 179ms 1.26% 73.39% 179ms 1.26% [libchaste_heart.so] 154ms 1.08% 74.47% 173ms 1.21% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 169ms 1.19% 75.66% 169ms 1.19% ddot_ 131ms 0.92% 76.58% 165ms 1.16% AbstractOneStepIvpOdeSolver::Solve 7ms 0.049% 76.63% 156ms 1.09% ompi_datatype_create 4ms 0.028% 76.66% 152ms 1.07% ompi_datatype_destroy 1ms 0.007% 76.66% 149ms 1.05% Hdf5DataWriter::PutUnlimitedVariable 7ms 0.049% 76.71% 149ms 1.05% MPI_Type_free 142ms 1% 77.71% 142ms 1% __memcpy_avx_unaligned_erms 138ms 0.97% 78.68% 138ms 0.97% TimeStepper::CalculateNextTime 29ms 0.2% 78.88% 138ms 0.97% __GI___libc_free 9ms 0.063% 78.94% 136ms 0.95% ompi_info_register_framework_params 0 0% 78.94% 133ms 0.93% VecDuplicate 6ms 0.042% 78.98% 133ms 0.93% VecDuplicate_MPI 36ms 0.25% 79.24% 131ms 0.92% ompi_datatype_release_args 119ms 0.83% 80.07% 119ms 0.83% __ieee754_log_fma 19ms 0.13% 80.20% 117ms 0.82% H5VM_chunk_index 5ms 0.035% 80.24% 109ms 0.76% PMPI_Type_create_resized 37ms 0.26% 80.50% 108ms 0.76% _int_free 3ms 0.021% 80.52% 107ms 0.75% VecNorm 3ms 0.021% 80.54% 103ms 0.72% VecTDot 1ms 0.007% 80.55% 99ms 0.69% PMPI_File_set_view 20ms 0.14% 80.69% 98ms 0.69% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 80.69% 98ms 0.69% VecTDot_Seq 0 0% 80.69% 98ms 0.69% VecXDot_Seq_Private.constprop.0 15ms 0.11% 80.79% 96ms 0.67% H5S_set_version 2ms 0.014% 80.81% 96ms 0.67% ompi_datatype_duplicate 8ms 0.056% 80.86% 95ms 0.67% std::vector::_M_assign_aux (inline) 0 0% 80.86% 95ms 0.67% std::vector::assign (inline) 52ms 0.36% 81.23% 94ms 0.66% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 81.23% 93ms 0.65% VecNorm_Seq 92ms 0.65% 81.87% 92ms 0.65% asuint64 (inline) 55ms 0.39% 82.26% 86ms 0.6% TimeStepper::AdvanceOneTimeStep 56ms 0.39% 82.65% 83ms 0.58% AbstractParameterisedSystem::GetAnyVariable 26ms 0.18% 82.84% 82ms 0.58% __libc_calloc 29ms 0.2% 83.04% 81ms 0.57% H5VM_array_calc 0 0% 83.04% 78ms 0.55% std::__copy_move::__copy_m (inline) 0 0% 83.04% 78ms 0.55% std::__copy_move_a (inline) 0 0% 83.04% 78ms 0.55% std::__copy_move_a1 (inline) 0 0% 83.04% 78ms 0.55% std::__copy_move_a2 (inline) 0 0% 83.04% 78ms 0.55% std::copy (inline) 77ms 0.54% 83.58% 77ms 0.54% [libm.so.6] 2ms 0.014% 83.59% 76ms 0.53% opal_datatype_create_desc 45ms 0.32% 83.91% 75ms 0.53% H5SL_search 3ms 0.021% 83.93% 75ms 0.53% VecCreate 74ms 0.52% 84.45% 74ms 0.52% std::isinf (inline) 25ms 0.18% 84.62% 73ms 0.51% H5S__hyper_rebuild 21ms 0.15% 84.77% 73ms 0.51% opal_dss_print_buffer_contents