File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12669ms, 85.84% of 14758ms total Dropped 749 nodes (cum <= 73.79ms) flat flat% sum% cum cum% 0 0% 0% 14751ms 100% __libc_start_call_main 0 0% 0% 14751ms 100% __libc_start_main_impl 0 0% 0% 14751ms 100% _start 0 0% 0% 14748ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14748ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14748ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14748ms 99.93% main 0 0% 0% 14712ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14712ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14712ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14691ms 99.55% AbstractCardiacProblem::Solve 6ms 0.041% 0.061% 11445ms 77.55% AbstractDynamicLinearPdeSolver::Solve 35ms 0.24% 0.3% 9117ms 61.78% AbstractCardiacTissue::SolveCellSystems 127ms 0.86% 1.16% 5713ms 38.71% AbstractCardiacCell::ComputeExceptVoltage 110ms 0.75% 1.90% 4835ms 32.76% AbstractOneStepIvpOdeSolver::InternalSolve 133ms 0.9% 2.81% 4172ms 28.27% EulerIvpOdeSolver::CalculateNextYValue 948ms 6.42% 9.23% 3989ms 27.03% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1710ms 11.59% 20.82% 3591ms 24.33% __GI___exp 2ms 0.014% 20.83% 3177ms 21.53% MonodomainProblem::WriteOneStep 3ms 0.02% 20.85% 3043ms 20.62% Hdf5DataWriter::PutVector 3ms 0.02% 20.87% 3015ms 20.43% H5Dwrite 3ms 0.02% 20.89% 2986ms 20.23% H5D__write 97ms 0.66% 21.55% 2618ms 17.74% AbstractCardiacTissue::UpdateCaches (inline) 786ms 5.33% 26.87% 2482ms 16.82% CellLuoRudy1991FromCellML::GetIIonic 1648ms 11.17% 38.04% 1799ms 12.19% __ieee754_exp_fma 1ms 0.0068% 38.05% 1772ms 12.01% H5D__chunk_collective_write 14ms 0.095% 38.14% 1771ms 12.00% H5F_set_coll_metadata_reads 20ms 0.14% 38.28% 1599ms 10.83% H5FD_s3comms_uriencode 3ms 0.02% 38.30% 1536ms 10.41% LinearSystem::Solve 1ms 0.0068% 38.30% 1412ms 9.57% KSPSolve 5ms 0.034% 38.34% 1412ms 9.57% KSPSolve_Private 4ms 0.027% 38.37% 1396ms 9.46% KSPSolve_CG 36ms 0.24% 38.61% 1213ms 8.22% 0 0% 38.61% 1211ms 8.21% H5F_block_write 1ms 0.0068% 38.62% 1211ms 8.21% H5PB_write 1ms 0.0068% 38.62% 1210ms 8.20% H5FD_write 0 0% 38.62% 1210ms 8.20% H5F__accum_write 2ms 0.014% 38.64% 1133ms 7.68% H5D__mpio_select_write 6ms 0.041% 38.68% 1109ms 7.51% H5D__chunk_cacheable 0 0% 38.68% 1047ms 7.09% PMPI_File_write_at_all 1018ms 6.90% 45.58% 1019ms 6.90% __GI_pwritev64 409ms 2.77% 48.35% 953ms 6.46% H5S_select_iterate 16ms 0.11% 48.46% 889ms 6.02% std::pow (inline) 80ms 0.54% 49.00% 873ms 5.92% __pow 98ms 0.66% 49.66% 791ms 5.36% __ieee754_pow_fma 0 0% 49.66% 781ms 5.29% PCApply 2ms 0.014% 49.67% 778ms 5.27% PCApply_BJacobi_Singleblock 329ms 2.23% 51.90% 766ms 5.19% MonodomainSolver::SetupLinearSystem 0 0% 51.90% 734ms 4.97% KSPSolve_PREONLY 0 0% 51.90% 729ms 4.94% MatSolve 718ms 4.87% 56.77% 729ms 4.94% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 56.77% 729ms 4.94% PCApply_ICC 274ms 1.86% 58.63% 609ms 4.13% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 58.65% 583ms 3.95% MatMult 580ms 3.93% 62.58% 580ms 3.93% MatMult_SeqAIJ 1ms 0.0068% 62.58% 554ms 3.75% KSP_PCApply.lto_priv.7 68ms 0.46% 63.04% 545ms 3.69% H5D__chunk_set_sizes 43ms 0.29% 63.34% 461ms 3.12% H5S_mpio_space_type 379ms 2.57% 65.90% 379ms 2.57% log_inline (inline) 283ms 1.92% 67.82% 294ms 1.99% exp_inline (inline) 1ms 0.0068% 67.83% 291ms 1.97% KSPConvergedDefault 140ms 0.95% 68.78% 276ms 1.87% TimeStepper::TimeStepper 0 0% 68.78% 230ms 1.56% KSP_PCApply 171ms 1.16% 69.93% 226ms 1.53% AbstractOneStepIvpOdeSolver::Solve 45ms 0.3% 70.24% 209ms 1.42% __GI___libc_malloc 197ms 1.33% 71.57% 197ms 1.33% [libchaste_heart.so] 166ms 1.12% 72.70% 195ms 1.32% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 152ms 1.03% 73.73% 193ms 1.31% _int_malloc 80ms 0.54% 74.27% 186ms 1.26% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 106ms 0.72% 74.99% 180ms 1.22% top12 (inline) 15ms 0.1% 75.09% 162ms 1.10% H5VM_chunk_index 162ms 1.10% 76.19% 162ms 1.10% ddot_ 3ms 0.02% 76.21% 151ms 1.02% ompi_datatype_create 31ms 0.21% 76.42% 143ms 0.97% std::__cxx11::basic_string::basic_string 1ms 0.0068% 76.43% 132ms 0.89% Hdf5DataWriter::PutUnlimitedVariable 131ms 0.89% 77.31% 131ms 0.89% TimeStepper::CalculateNextTime 20ms 0.14% 77.45% 131ms 0.89% __GI___libc_free 98ms 0.66% 78.11% 130ms 0.88% AbstractParameterisedSystem::GetAnyVariable 11ms 0.075% 78.19% 130ms 0.88% MPI_Type_free 10ms 0.068% 78.26% 130ms 0.88% ompi_datatype_destroy 22ms 0.15% 78.40% 122ms 0.83% AbstractCardiacCell::SetVoltage (partial-inline) 122ms 0.83% 79.23% 122ms 0.83% std::isinf (inline) 2ms 0.014% 79.25% 115ms 0.78% VecNorm 114ms 0.77% 80.02% 114ms 0.77% __ieee754_log_fma 47ms 0.32% 80.34% 111ms 0.75% _int_free 32ms 0.22% 80.55% 110ms 0.75% ompi_datatype_release_args 1ms 0.0068% 80.56% 110ms 0.75% ompi_info_register_framework_params 12ms 0.081% 80.64% 102ms 0.69% H5S_set_version 1ms 0.0068% 80.65% 101ms 0.68% PMPI_File_set_view 0 0% 80.65% 101ms 0.68% VecNorm_Seq 52ms 0.35% 81.00% 97ms 0.66% H5S_hyper_add_span_element 6ms 0.041% 81.04% 95ms 0.64% PMPI_Type_create_resized 2ms 0.014% 81.05% 93ms 0.63% VecTDot 8ms 0.054% 81.11% 93ms 0.63% std::char_traits::length (inline) 39ms 0.26% 81.37% 90ms 0.61% H5VM_array_calc 0 0% 81.37% 90ms 0.61% VecDuplicate 1ms 0.0068% 81.38% 90ms 0.61% VecDuplicate_MPI 0 0% 81.38% 89ms 0.6% VecTDot_Seq 2ms 0.014% 81.39% 89ms 0.6% VecXDot_Seq_Private.constprop.0 87ms 0.59% 81.98% 87ms 0.59% __strlen_avx2 85ms 0.58% 82.56% 85ms 0.58% [libm.so.6] 1ms 0.0068% 82.57% 85ms 0.58% ompi_datatype_duplicate 42ms 0.28% 82.85% 81ms 0.55% H5SL_search 79ms 0.54% 83.39% 80ms 0.54% std::vector::operator[] (inline) 66ms 0.45% 83.83% 79ms 0.54% AbstractParameterisedSystem::SetAnyVariable 20ms 0.14% 83.97% 76ms 0.51% __libc_calloc 76ms 0.51% 84.48% 76ms 0.51% asuint64 (inline) 52ms 0.35% 84.84% 75ms 0.51% TimeStepper::AdvanceOneTimeStep 75ms 0.51% 85.34% 75ms 0.51% TimeStepper::GetNextTimeStep 74ms 0.5% 85.84% 74ms 0.5% H5VM_array_offset_pre