File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 385ms, 87.10% of 442ms total Dropped 189 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 435ms 98.42% __libc_start_call_main 0 0% 0% 435ms 98.42% __libc_start_main_impl 0 0% 0% 435ms 98.42% _start 0 0% 0% 432ms 97.74% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 432ms 97.74% CxxTest::TestRunner::runAllTests 0 0% 0% 432ms 97.74% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 432ms 97.74% main 0 0% 0% 394ms 89.14% CxxTest::RealTestDescription::run 0 0% 0% 394ms 89.14% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 394ms 89.14% CxxTest::TestRunner::runTest (inline) 0 0% 0% 394ms 89.14% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 394ms 89.14% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 1ms 0.23% 0.23% 390ms 88.24% AbstractCardiacProblem::Solve 0 0% 0.23% 387ms 87.56% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.23% 351ms 79.41% KSPSolve 0 0% 0.23% 351ms 79.41% KSPSolve_Private 0 0% 0.23% 351ms 79.41% LinearSystem::Solve 0 0% 0.23% 349ms 78.96% KSPSolve_CG 0 0% 0.23% 206ms 46.61% KSP_PCApply.lto_priv.7 0 0% 0.23% 193ms 43.67% PCApply 0 0% 0.23% 193ms 43.67% PCApply_BJacobi_Singleblock 0 0% 0.23% 165ms 37.33% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 158ms 35.75% MatSolve 157ms 35.52% 35.75% 158ms 35.75% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.75% 158ms 35.75% PCApply_ICC 1ms 0.23% 35.97% 72ms 16.29% MatMult 1ms 0.23% 36.20% 71ms 16.06% MatMult_SeqAIJ (partial-inline) 70ms 15.84% 52.04% 71ms 16.06% MatMult_SeqAIJ_Inode (inline) 42ms 9.50% 61.54% 42ms 9.50% ddot_ 0 0% 61.54% 35ms 7.92% CxxTest::RealWorldDescription::setUp 0 0% 61.54% 35ms 7.92% PMPI_Init_thread 0 0% 61.54% 35ms 7.92% PetscInitialize 0 0% 61.54% 35ms 7.92% PetscSetup::setUpWorld 0 0% 61.54% 35ms 7.92% PetscSetupUtils::CommonSetup 0 0% 61.54% 35ms 7.92% PetscSetupUtils::InitialisePetsc 0 0% 61.54% 35ms 7.92% ompi_mpi_init 0 0% 61.54% 31ms 7.01% MatNullSpaceRemove 1ms 0.23% 61.76% 29ms 6.56% AbstractCardiacTissue::SolveCellSystems 2ms 0.45% 62.22% 26ms 5.88% 0 0% 62.22% 24ms 5.43% VecTDot 0 0% 62.22% 24ms 5.43% VecTDot_Seq 0 0% 62.22% 24ms 5.43% VecXDot_Seq_Private.constprop.0 0 0% 62.22% 24ms 5.43% orte_init 0 0% 62.22% 20ms 4.52% VecMDot 19ms 4.30% 66.52% 20ms 4.52% VecMDot_Seq 0 0% 66.52% 20ms 4.52% VecMXDot_Private 0 0% 66.52% 18ms 4.07% VecNorm 0 0% 66.52% 18ms 4.07% VecNorm_Seq 0 0% 66.52% 17ms 3.85% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.52% 16ms 3.62% VecAYPX 16ms 3.62% 70.14% 16ms 3.62% VecAYPX_Seq 0 0% 70.14% 15ms 3.39% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.23% 70.36% 15ms 3.39% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.36% 15ms 3.39% EulerIvpOdeSolver::CalculateNextYValue 8ms 1.81% 72.17% 15ms 3.39% __GI___exp 0 0% 72.17% 14ms 3.17% __GI__dl_catch_exception 0 0% 72.17% 14ms 3.17% _dl_catch_error 0 0% 72.17% 14ms 3.17% _dlerror_run 0 0% 72.17% 14ms 3.17% mca_base_framework_open 0 0% 72.17% 13ms 2.94% ___dlopen 0 0% 72.17% 13ms 2.94% _dl_open 0 0% 72.17% 13ms 2.94% dl_open_worker 0 0% 72.17% 13ms 2.94% dlopen_doit 0 0% 72.17% 13ms 2.94% dlopen_implementation (inline) 0 0% 72.17% 13ms 2.94% hwloc_topology_load 0 0% 72.17% 13ms 2.94% mca_base_framework_components_register 0 0% 72.17% 13ms 2.94% mca_base_framework_register 0 0% 72.17% 13ms 2.94% opal_stackframe_output 0 0% 72.17% 12ms 2.71% VecDuplicate 0 0% 72.17% 12ms 2.71% dl_open_worker_begin 0 0% 72.17% 12ms 2.71% hwloc_linux_get_tid_last_cpu_location 0 0% 72.17% 12ms 2.71% mca_base_component_find 0 0% 72.17% 12ms 2.71% mca_base_component_repository_open 0 0% 72.17% 11ms 2.49% VecDuplicate_Seq 0 0% 72.17% 11ms 2.49% VecMAXPY 11ms 2.49% 74.66% 11ms 2.49% VecMAXPY_Seq 0 0% 74.66% 9ms 2.04% KSP_PCApply (partial-inline) 2ms 0.45% 75.11% 9ms 2.04% VecAXPY 0 0% 75.11% 8ms 1.81% PetscMemzero (inline) 8ms 1.81% 76.92% 8ms 1.81% __memset_avx2_unaligned_erms 0 0% 76.92% 8ms 1.81% _dl_init 0 0% 76.92% 8ms 1.81% call_init (inline) 1ms 0.23% 77.15% 7ms 1.58% PetscMallocA 0 0% 77.15% 7ms 1.58% VecAXPY_Seq 7ms 1.58% 78.73% 7ms 1.58% __ieee754_exp_fma 0 0% 78.73% 7ms 1.58% _dl_start_user 7ms 1.58% 80.32% 7ms 1.58% daxpy_ 1ms 0.23% 80.54% 6ms 1.36% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 80.54% 6ms 1.36% PetscMallocAlign (partial-inline) 0 0% 80.54% 6ms 1.36% VecSetType 0 0% 80.54% 6ms 1.36% _dl_map_object 0 0% 80.54% 6ms 1.36% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.54% 6ms 1.36% boost::serialization::singleton::get_instance 0 0% 80.54% 6ms 1.36% opal_hwloc_base_get_topology 0 0% 80.54% 6ms 1.36% orte_ess_base_proc_binding 3ms 0.68% 81.22% 5ms 1.13% CellLuoRudy1991FromCellML::GetIIonic 0 0% 81.22% 5ms 1.13% VecCreate 0 0% 81.22% 5ms 1.13% VecCreate_Seq 1ms 0.23% 81.45% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 81.45% 4ms 0.9% PetscMemcpy (inline) 0 0% 81.45% 4ms 0.9% XOpenDisplay 0 0% 81.45% 4ms 0.9% [hwloc_gl.so] 4ms 0.9% 82.35% 4ms 0.9% [libchaste_heart.so] 0 0% 82.35% 4ms 0.9% _XConnectXCB 4ms 0.9% 83.26% 4ms 0.9% __memcpy_avx_unaligned_erms 0 0% 83.26% 4ms 0.9% _dl_lookup_symbol_x 0 0% 83.26% 4ms 0.9% _dl_map_object_deps 0 0% 83.26% 4ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.26% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.9% 84.16% 4ms 0.9% strcmp 0 0% 84.16% 3ms 0.68% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 84.16% 3ms 0.68% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 84.16% 3ms 0.68% AbstractCardiacProblem::Initialise 0 0% 84.16% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.16% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 84.16% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.16% 3ms 0.68% KSPConvergedDefault 0 0% 84.16% 3ms 0.68% PetscFinalize 0 0% 84.16% 3ms 0.68% PetscHeaderCreate_Private 0 0% 84.16% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 84.16% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 84.16% 3ms 0.68% VecCopy 0 0% 84.16% 3ms 0.68% VecCopy_Seq (partial-inline) 0 0% 84.16% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 84.16% 3ms 0.68% __GI_exit 0 0% 84.16% 3ms 0.68% __cxa_finalize 3ms 0.68% 84.84% 3ms 0.68% __mmap64 0 0% 84.84% 3ms 0.68% __run_exit_handlers 3ms 0.68% 85.52% 3ms 0.68% __strcmp_avx2 3ms 0.68% 86.20% 3ms 0.68% __strlen_avx2 0 0% 86.20% 3ms 0.68% _dl_call_fini 0 0% 86.20% 3ms 0.68% _dl_fini 0 0% 86.20% 3ms 0.68% _dl_map_object_from_fd 0 0% 86.20% 3ms 0.68% _dl_map_segments (inline) 0 0% 86.20% 3ms 0.68% _dl_open_relocate_one_object (inline) 0 0% 86.20% 3ms 0.68% _dl_relocate_object 1ms 0.23% 86.43% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 3ms 0.68% 87.10% 3ms 0.68% do_lookup_x 0 0% 87.10% 3ms 0.68% mca_base_framework_close 0 0% 87.10% 3ms 0.68% mca_base_framework_components_open 0 0% 87.10% 3ms 0.68% ompi_mpi_finalize 0 0% 87.10% 3ms 0.68% openaux 0 0% 87.10% 3ms 0.68% xcb_connect_to_display_with_auth_info