File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12529ms, 86.69% of 14452ms total Dropped 714 nodes (cum <= 72.26ms) flat flat% sum% cum cum% 0 0% 0% 14445ms 100% __libc_start_call_main 0 0% 0% 14445ms 100% __libc_start_main_impl 0 0% 0% 14445ms 100% _start 0 0% 0% 14442ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14442ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14442ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14442ms 99.93% main 0 0% 0% 14408ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14408ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14408ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.021% 0.021% 14385ms 99.54% AbstractCardiacProblem::Solve 3ms 0.021% 0.042% 11344ms 78.49% AbstractDynamicLinearPdeSolver::Solve 35ms 0.24% 0.28% 8816ms 61.00% AbstractCardiacTissue::SolveCellSystems 94ms 0.65% 0.93% 5440ms 37.64% AbstractCardiacCell::ComputeExceptVoltage 90ms 0.62% 1.56% 4754ms 32.90% AbstractOneStepIvpOdeSolver::InternalSolve 130ms 0.9% 2.46% 4125ms 28.54% EulerIvpOdeSolver::CalculateNextYValue 993ms 6.87% 9.33% 3944ms 27.29% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1742ms 12.05% 21.38% 3537ms 24.47% __GI___exp 2ms 0.014% 21.39% 2983ms 20.64% MonodomainProblem::WriteOneStep 1ms 0.0069% 21.40% 2889ms 19.99% H5Dwrite 1ms 0.0069% 21.41% 2876ms 19.90% Hdf5DataWriter::PutVector 2ms 0.014% 21.42% 2858ms 19.78% H5D__write 85ms 0.59% 22.01% 2646ms 18.31% AbstractCardiacTissue::UpdateCaches (inline) 770ms 5.33% 27.34% 2520ms 17.44% CellLuoRudy1991FromCellML::GetIIonic 1564ms 10.82% 38.16% 1739ms 12.03% __ieee754_exp_fma 3ms 0.021% 38.18% 1521ms 10.52% H5D__chunk_collective_write 15ms 0.1% 38.29% 1518ms 10.50% H5F_set_coll_metadata_reads 2ms 0.014% 38.30% 1489ms 10.30% LinearSystem::Solve 9ms 0.062% 38.36% 1328ms 9.19% H5FD_s3comms_uriencode 2ms 0.014% 38.38% 1306ms 9.04% KSPSolve 1ms 0.0069% 38.38% 1305ms 9.03% KSPSolve_Private 2ms 0.014% 38.40% 1302ms 9.01% KSPSolve_CG 4ms 0.028% 38.42% 1262ms 8.73% H5D__chunk_cacheable 464ms 3.21% 41.63% 1129ms 7.81% H5S_select_iterate 421ms 2.91% 44.55% 1015ms 7.02% MonodomainSolver::SetupLinearSystem 1ms 0.0069% 44.55% 973ms 6.73% H5F_block_write 4ms 0.028% 44.58% 972ms 6.73% H5PB_write 1ms 0.0069% 44.59% 968ms 6.70% H5FD_write 0 0% 44.59% 968ms 6.70% H5F__accum_write 45ms 0.31% 44.90% 967ms 6.69% 8ms 0.055% 44.96% 911ms 6.30% std::pow (inline) 2ms 0.014% 44.97% 907ms 6.28% H5D__mpio_select_write 90ms 0.62% 45.59% 903ms 6.25% __pow 0 0% 45.59% 820ms 5.67% PMPI_File_write_at_all 96ms 0.66% 46.26% 813ms 5.63% __ieee754_pow_fma 792ms 5.48% 51.74% 794ms 5.49% __GI_pwritev64 2ms 0.014% 51.75% 733ms 5.07% MatMult 728ms 5.04% 56.79% 731ms 5.06% MatMult_SeqAIJ 75ms 0.52% 57.31% 683ms 4.73% H5D__chunk_set_sizes 2ms 0.014% 57.32% 669ms 4.63% PCApply 1ms 0.0069% 57.33% 665ms 4.60% PCApply_BJacobi_Singleblock 0 0% 57.33% 620ms 4.29% KSPSolve_PREONLY 1ms 0.0069% 57.33% 617ms 4.27% MatSolve 0 0% 57.33% 617ms 4.27% PCApply_ICC 605ms 4.19% 61.52% 616ms 4.26% MatSolve_SeqSBAIJ_1_NaturalOrdering 260ms 1.80% 63.32% 577ms 3.99% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 63.32% 457ms 3.16% KSP_PCApply.lto_priv.7 67ms 0.46% 63.78% 444ms 3.07% H5S_mpio_space_type 376ms 2.60% 66.39% 376ms 2.60% log_inline (inline) 305ms 2.11% 68.50% 313ms 2.17% exp_inline (inline) 1ms 0.0069% 68.50% 286ms 1.98% KSPConvergedDefault 133ms 0.92% 69.42% 257ms 1.78% TimeStepper::TimeStepper 1ms 0.0069% 69.43% 214ms 1.48% KSP_PCApply 212ms 1.47% 70.90% 212ms 1.47% [libchaste_heart.so] 8ms 0.055% 70.95% 208ms 1.44% H5VM_chunk_index 137ms 0.95% 71.90% 208ms 1.44% top12 (inline) 39ms 0.27% 72.17% 206ms 1.43% __GI___libc_malloc 159ms 1.10% 73.27% 203ms 1.40% _int_malloc 96ms 0.66% 73.93% 190ms 1.31% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 14ms 0.097% 74.03% 183ms 1.27% ompi_datatype_create 36ms 0.25% 74.28% 160ms 1.11% __GI___libc_free 137ms 0.95% 75.23% 154ms 1.07% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 112ms 0.77% 76.00% 144ms 1% AbstractOneStepIvpOdeSolver::Solve 144ms 1% 77.00% 144ms 1% ddot_ 7ms 0.048% 77.05% 142ms 0.98% MPI_Type_free 6ms 0.042% 77.09% 141ms 0.98% ompi_datatype_destroy 19ms 0.13% 77.22% 140ms 0.97% H5S_set_version 1ms 0.0069% 77.23% 140ms 0.97% VecDuplicate 8ms 0.055% 77.28% 139ms 0.96% VecDuplicate_MPI 131ms 0.91% 78.19% 131ms 0.91% TimeStepper::CalculateNextTime 57ms 0.39% 78.58% 125ms 0.86% H5S_hyper_add_span_element 54ms 0.37% 78.96% 124ms 0.86% std::__cxx11::basic_string::basic_string 50ms 0.35% 79.30% 123ms 0.85% _int_free 53ms 0.37% 79.67% 121ms 0.84% H5VM_array_calc 2ms 0.014% 79.68% 120ms 0.83% VecNorm 29ms 0.2% 79.89% 120ms 0.83% ompi_datatype_release_args 4ms 0.028% 79.91% 120ms 0.83% ompi_info_register_framework_params 120ms 0.83% 80.74% 120ms 0.83% std::isinf (inline) 119ms 0.82% 81.57% 119ms 0.82% __ieee754_log_fma 4ms 0.028% 81.59% 109ms 0.75% VecNorm_Seq 58ms 0.4% 82.00% 107ms 0.74% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 82.00% 105ms 0.73% Hdf5DataWriter::PutUnlimitedVariable 104ms 0.72% 82.72% 104ms 0.72% H5VM_chunk_index_scaled 2ms 0.014% 82.73% 102ms 0.71% PMPI_Type_create_resized 25ms 0.17% 82.90% 99ms 0.69% AbstractCardiacCell::SetVoltage (partial-inline) 98ms 0.68% 83.58% 98ms 0.68% H5VM_array_offset_pre 1ms 0.0069% 83.59% 95ms 0.66% ompi_datatype_duplicate 72ms 0.5% 84.09% 94ms 0.65% AbstractParameterisedSystem::GetAnyVariable 0 0% 84.09% 94ms 0.65% PMPI_File_set_view 92ms 0.64% 84.72% 92ms 0.64% __memcpy_avx_unaligned_erms 8ms 0.055% 84.78% 88ms 0.61% PetscMallocA 3ms 0.021% 84.80% 86ms 0.6% opal_datatype_create_desc 62ms 0.43% 85.23% 85ms 0.59% TimeStepper::AdvanceOneTimeStep 29ms 0.2% 85.43% 85ms 0.59% __libc_calloc 2ms 0.014% 85.44% 83ms 0.57% VecCreate 2ms 0.014% 85.46% 80ms 0.55% PetscMallocAlign 77ms 0.53% 85.99% 78ms 0.54% std::vector::operator[] (inline) 28ms 0.19% 86.18% 74ms 0.51% H5S_select_iter_next 0 0% 86.18% 74ms 0.51% VecTDot 0 0% 86.18% 74ms 0.51% VecTDot_Seq 0 0% 86.18% 74ms 0.51% VecXDot_Seq_Private.constprop.0 74ms 0.51% 86.69% 74ms 0.51% asuint64 (inline)