File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 11527ms, 88.15% of 13076ms total Dropped 685 nodes (cum <= 65.38ms) flat flat% sum% cum cum% 0 0% 0% 13069ms 99.95% __libc_start_call_main 0 0% 0% 13069ms 99.95% __libc_start_main_impl 0 0% 0% 13069ms 99.95% _start 0 0% 0% 13066ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 13066ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 13066ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 13066ms 99.92% main 0 0% 0% 13033ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 13033ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 13033ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 13013ms 99.52% AbstractCardiacProblem::Solve 4ms 0.031% 0.031% 10014ms 76.58% AbstractDynamicLinearPdeSolver::Solve 52ms 0.4% 0.43% 7730ms 59.12% AbstractCardiacTissue::SolveCellSystems 61ms 0.47% 0.89% 4870ms 37.24% AbstractCardiacCell::ComputeExceptVoltage 78ms 0.6% 1.49% 4393ms 33.60% AbstractOneStepIvpOdeSolver::InternalSolve 124ms 0.95% 2.44% 3812ms 29.15% EulerIvpOdeSolver::CalculateNextYValue 1038ms 7.94% 10.38% 3639ms 27.83% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.38% 2941ms 22.49% MonodomainProblem::WriteOneStep 1ms 0.0076% 10.39% 2860ms 21.87% Hdf5DataWriter::PutVector 1ms 0.0076% 10.39% 2836ms 21.69% H5Dwrite 1ms 0.0076% 10.40% 2825ms 21.60% H5D__write 1088ms 8.32% 18.72% 2825ms 21.60% __GI___exp 71ms 0.54% 19.26% 2100ms 16.06% AbstractCardiacTissue::UpdateCaches (inline) 533ms 4.08% 23.34% 1970ms 15.07% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.34% 1669ms 12.76% H5D__chunk_collective_write 12ms 0.092% 23.43% 1669ms 12.76% H5F_set_coll_metadata_reads 1501ms 11.48% 34.91% 1511ms 11.56% __ieee754_exp_fma 1ms 0.0076% 34.92% 1490ms 11.39% LinearSystem::Solve 8ms 0.061% 34.98% 1459ms 11.16% H5FD_s3comms_uriencode 0 0% 34.98% 1409ms 10.78% KSPSolve 0 0% 34.98% 1409ms 10.78% KSPSolve_Private 4ms 0.031% 35.01% 1404ms 10.74% KSPSolve_CG 25ms 0.19% 35.20% 1177ms 9.00% 0 0% 35.20% 1162ms 8.89% H5FD_write 0 0% 35.20% 1162ms 8.89% H5F__accum_write 0 0% 35.20% 1162ms 8.89% H5F_block_write 0 0% 35.20% 1162ms 8.89% H5PB_write 12ms 0.092% 35.29% 1117ms 8.54% H5D__chunk_cacheable 0 0% 35.29% 1105ms 8.45% H5D__mpio_select_write 0 0% 35.29% 1060ms 8.11% PMPI_File_write_at_all 1036ms 7.92% 43.22% 1044ms 7.98% __GI_pwritev64 333ms 2.55% 45.76% 988ms 7.56% H5S_select_iterate 20ms 0.15% 45.92% 811ms 6.20% std::pow (inline) 41ms 0.31% 46.23% 785ms 6.00% __pow 262ms 2.00% 48.23% 775ms 5.93% MonodomainSolver::SetupLinearSystem 1ms 0.0076% 48.24% 765ms 5.85% PCApply 0 0% 48.24% 761ms 5.82% PCApply_BJacobi_Singleblock 47ms 0.36% 48.60% 738ms 5.64% __ieee754_pow_fma 1ms 0.0076% 48.61% 734ms 5.61% KSPSolve_PREONLY 1ms 0.0076% 48.62% 731ms 5.59% MatSolve 0 0% 48.62% 731ms 5.59% PCApply_ICC 724ms 5.54% 54.15% 730ms 5.58% MatSolve_SeqSBAIJ_1_NaturalOrdering 64ms 0.49% 54.64% 677ms 5.18% H5D__chunk_set_sizes 3ms 0.023% 54.67% 647ms 4.95% MatMult 640ms 4.89% 59.56% 644ms 4.93% MatMult_SeqAIJ 380ms 2.91% 62.47% 594ms 4.54% CellLuoRudy1991FromCellML::VerifyStateVariables 539ms 4.12% 66.59% 539ms 4.12% [libchaste_heart.so] 0 0% 66.59% 525ms 4.01% KSP_PCApply.lto_priv.7 41ms 0.31% 66.90% 358ms 2.74% H5S_mpio_space_type 301ms 2.30% 69.20% 352ms 2.69% exp_inline (inline) 330ms 2.52% 71.73% 330ms 2.52% log_inline (inline) 1ms 0.0076% 71.73% 307ms 2.35% KSPConvergedDefault 33ms 0.25% 71.99% 295ms 2.26% H5VM_chunk_index 244ms 1.87% 73.85% 244ms 1.87% [libm.so.6] 0 0% 73.85% 241ms 1.84% KSP_PCApply 230ms 1.76% 75.61% 230ms 1.76% H5VM_chunk_index_scaled 41ms 0.31% 75.93% 219ms 1.67% TimeStepper::TimeStepper 18ms 0.14% 76.06% 190ms 1.45% ompi_datatype_destroy 1ms 0.0076% 76.07% 181ms 1.38% MPI_Type_free 21ms 0.16% 76.23% 173ms 1.32% __GI___libc_free 170ms 1.30% 77.53% 170ms 1.30% TimeStepper::CalculateNextTime 65ms 0.5% 78.03% 170ms 1.30% __GI___libc_malloc 41ms 0.31% 78.34% 160ms 1.22% ompi_datatype_release_args 1ms 0.0076% 78.35% 160ms 1.22% ompi_info_register_framework_params 95ms 0.73% 79.08% 151ms 1.15% _int_free 148ms 1.13% 80.21% 148ms 1.13% [libchaste_ode.so] 6ms 0.046% 80.25% 141ms 1.08% ompi_datatype_create 123ms 0.94% 81.19% 123ms 0.94% ddot_ 65ms 0.5% 81.69% 116ms 0.89% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 54ms 0.41% 82.10% 116ms 0.89% std::__cxx11::basic_string::basic_string 33ms 0.25% 82.36% 113ms 0.86% AbstractCardiacCell::SetVoltage (partial-inline) 78ms 0.6% 82.95% 112ms 0.86% _int_malloc 61ms 0.47% 83.42% 106ms 0.81% H5S_hyper_add_span_element 29ms 0.22% 83.64% 103ms 0.79% H5S_set_version 99ms 0.76% 84.40% 99ms 0.76% __memcpy_avx512_unaligned_erms 65ms 0.5% 84.90% 96ms 0.73% AbstractOneStepIvpOdeSolver::Solve 93ms 0.71% 85.61% 93ms 0.71% __ieee754_log_fma 2ms 0.015% 85.62% 92ms 0.7% PMPI_Type_create_resized 0 0% 85.62% 91ms 0.7% VecNorm 0 0% 85.62% 91ms 0.7% std::vector::_M_assign_aux (inline) 0 0% 85.62% 91ms 0.7% std::vector::assign (inline) 1ms 0.0076% 85.63% 85ms 0.65% VecNorm_Seq 29ms 0.22% 85.85% 81ms 0.62% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 3ms 0.023% 85.87% 81ms 0.62% Hdf5DataWriter::PutUnlimitedVariable 64ms 0.49% 86.36% 80ms 0.61% AbstractParameterisedSystem::GetAnyVariable 78ms 0.6% 86.96% 78ms 0.6% ReplicatableVector::operator[] 59ms 0.45% 87.41% 78ms 0.6% __libc_calloc 2ms 0.015% 87.43% 78ms 0.6% ompi_datatype_duplicate 44ms 0.34% 87.76% 76ms 0.58% TimeStepper::AdvanceOneTimeStep 21ms 0.16% 87.92% 75ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 24ms 0.18% 88.11% 74ms 0.57% H5VM_array_calc 0 0% 88.11% 73ms 0.56% VecDuplicate 3ms 0.023% 88.13% 73ms 0.56% VecDuplicate_MPI 0 0% 88.13% 72ms 0.55% std::__copy_move::__copy_m (inline) 0 0% 88.13% 72ms 0.55% std::__copy_move_a (inline) 0 0% 88.13% 72ms 0.55% std::__copy_move_a1 (inline) 0 0% 88.13% 72ms 0.55% std::__copy_move_a2 (inline) 0 0% 88.13% 72ms 0.55% std::copy (inline) 0 0% 88.13% 70ms 0.54% PMPI_File_set_view 3ms 0.023% 88.15% 69ms 0.53% opal_datatype_create_desc