File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117052ms, 91.79% of 127516ms total Dropped 1136 nodes (cum <= 637.58ms) flat flat% sum% cum cum% 0 0% 0% 127500ms 100% __libc_start_call_main 0 0% 0% 127500ms 100% __libc_start_main_impl 0 0% 0% 127500ms 100% _start 0 0% 0% 127497ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127497ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127497ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127497ms 100% main 0 0% 0% 127459ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127459ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127459ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127459ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127459ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 127458ms 100% AbstractConvergenceTester::Converge 6ms 0.0047% 0.0047% 126291ms 99.04% AbstractCardiacProblem::Solve 18ms 0.014% 0.019% 125407ms 98.35% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0055% 0.024% 68122ms 53.42% LinearSystem::Solve 3ms 0.0024% 0.027% 67518ms 52.95% KSPSolve 11ms 0.0086% 0.035% 67516ms 52.95% KSPSolve_Private 11ms 0.0086% 0.044% 67148ms 52.66% KSPSolve_SYMMLQ 500ms 0.39% 0.44% 48274ms 37.86% AbstractCardiacTissue::SolveCellSystems 7ms 0.0055% 0.44% 39321ms 30.84% PCApply 11ms 0.0086% 0.45% 39306ms 30.82% PCApply_BJacobi_Singleblock 1033ms 0.81% 1.26% 37898ms 29.72% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00078% 1.26% 37092ms 29.09% KSPSolve_PREONLY (partial-inline) 2ms 0.0016% 1.26% 35884ms 28.14% PCApply_ICC 2ms 0.0016% 1.26% 35882ms 28.14% MatSolve 35516ms 27.85% 29.12% 35880ms 28.14% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00078% 29.12% 33909ms 26.59% KSP_PCApply.lto_priv.18 7587ms 5.95% 35.07% 33610ms 26.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 3ms 0.0024% 35.07% 22510ms 17.65% MatMult 250ms 0.2% 35.27% 22507ms 17.65% MatMult_SeqAIJ (partial-inline) 21971ms 17.23% 52.50% 22505ms 17.65% MatMult_SeqAIJ_Inode (inline) 2354ms 1.85% 54.34% 17329ms 13.59% CardiacNewtonSolver::Solve 5781ms 4.53% 58.87% 10348ms 8.12% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1231ms 0.97% 59.84% 10087ms 7.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 136ms 0.11% 59.95% 8737ms 6.85% AbstractCardiacTissue::UpdateCaches (inline) 8574ms 6.72% 66.67% 8574ms 6.72% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1685ms 1.32% 67.99% 8387ms 6.58% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1157ms 0.91% 68.90% 7927ms 6.22% BidomainSolver::SetupLinearSystem 1ms 0.00078% 68.90% 7481ms 5.87% KSP_PCApply (partial-inline) 4ms 0.0031% 68.90% 6882ms 5.40% KSPConvergedDefault 4270ms 3.35% 72.25% 4383ms 3.44% __ieee754_log_fma 0 0% 72.25% 4170ms 3.27% boost::numeric::ublas::norm_inf (inline) 2848ms 2.23% 74.49% 4170ms 3.27% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.49% 4170ms 3.27% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.49% 4170ms 3.27% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.0047% 74.49% 3437ms 2.70% MatNullSpaceRemove 3206ms 2.51% 77.00% 3206ms 2.51% ddot_ 40ms 0.031% 77.04% 3096ms 2.43% std::pow (inline) 1981ms 1.55% 78.59% 3072ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 429ms 0.34% 78.93% 3042ms 2.39% __pow 5ms 0.0039% 78.93% 2662ms 2.09% VecDot 0 0% 78.93% 2657ms 2.08% VecDot_Seq 0 0% 78.93% 2657ms 2.08% VecXDot_Seq_Private.constprop.0 2646ms 2.08% 81.00% 2646ms 2.08% __memcpy_avx_unaligned_erms 0 0% 81.00% 2607ms 2.04% PetscMemcpy (inline) 340ms 0.27% 81.27% 2581ms 2.02% __ieee754_pow_fma 13ms 0.01% 81.28% 2267ms 1.78% VecCopy 5ms 0.0039% 81.29% 2252ms 1.77% VecCopy_Seq (partial-inline) 2ms 0.0016% 81.29% 2160ms 1.69% VecMDot 7ms 0.0055% 81.29% 2158ms 1.69% VecMXDot_Private 2140ms 1.68% 82.97% 2148ms 1.68% VecMDot_Seq 16ms 0.013% 82.98% 2038ms 1.60% VecAXPY 2ms 0.0016% 82.98% 2022ms 1.59% VecAXPY_Seq 2006ms 1.57% 84.56% 2006ms 1.57% daxpy_ 0 0% 84.56% 1999ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 22ms 0.017% 84.58% 1675ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1487ms 1.17% 85.74% 1534ms 1.20% exp_inline (inline) 0 0% 85.74% 1384ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.74% 1310ms 1.03% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.74% 1310ms 1.03% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.74% 1310ms 1.03% boost_numeric_ublas_abs (inline) 1310ms 1.03% 86.77% 1310ms 1.03% std::abs (inline) 6ms 0.0047% 86.77% 1271ms 1% VecMAXPY 1256ms 0.98% 87.76% 1265ms 0.99% VecMAXPY_Seq 6ms 0.0047% 87.76% 1089ms 0.85% boost::numeric::ublas::matrix_assign (inline) 227ms 0.18% 87.94% 1076ms 0.84% boost::numeric::ublas::indexing_matrix_assign 740ms 0.58% 88.52% 1057ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.52% 1008ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.52% 1007ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00078% 88.52% 1007ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0024% 88.52% 914ms 0.72% VecNorm 1ms 0.00078% 88.53% 902ms 0.71% VecNorm_Seq 1ms 0.00078% 88.53% 889ms 0.7% Element::Element 9ms 0.0071% 88.53% 887ms 0.7% BidomainAssembler::ComputeMatrixTerm 3ms 0.0024% 88.54% 877ms 0.69% AbstractTetrahedralElement::CalculateJacobian 9ms 0.0071% 88.54% 873ms 0.68% boost::numeric::ublas::c_matrix::c_matrix (inline) 862ms 0.68% 89.22% 862ms 0.68% [libchaste_heart.so] 0 0% 89.22% 824ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00078% 89.22% 814ms 0.64% BidomainProblem::WriteOneStep 6ms 0.0047% 89.22% 782ms 0.61% VecScale 3ms 0.0024% 89.23% 776ms 0.61% VecScale_Seq 770ms 0.6% 89.83% 770ms 0.6% dscal_ 172ms 0.13% 89.97% 733ms 0.57% AbstractCardiacCell::SetVoltage 2ms 0.0016% 89.97% 717ms 0.56% AbstractBidomainSolver::FinaliseLinearSystem 239ms 0.19% 90.15% 712ms 0.56% AbstractBidomainSolver::CheckCompatibilityCondition 709ms 0.56% 90.71% 709ms 0.56% __memset_avx2_unaligned_erms 705ms 0.55% 91.26% 705ms 0.55% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 91.26% 695ms 0.55% VecNorm_MPI 4ms 0.0031% 91.27% 695ms 0.55% VecNorm_MPI_Default.constprop.0 0 0% 91.27% 693ms 0.54% PetscMemzero (inline) 671ms 0.53% 91.79% 671ms 0.53% log_inline (inline) 2ms 0.0016% 91.79% 638ms 0.5% VecDuplicate