File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12535ms, 85.59% of 14646ms total Dropped 771 nodes (cum <= 73.23ms) flat flat% sum% cum cum% 0 0% 0% 14637ms 99.94% __libc_start_call_main 0 0% 0% 14637ms 99.94% __libc_start_main_impl 0 0% 0% 14637ms 99.94% _start 0 0% 0% 14634ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14634ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14634ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14634ms 99.92% main 0 0% 0% 14592ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14592ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14592ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14568ms 99.47% AbstractCardiacProblem::Solve 1ms 0.0068% 0.0068% 11219ms 76.60% AbstractDynamicLinearPdeSolver::Solve 70ms 0.48% 0.48% 8779ms 59.94% AbstractCardiacTissue::SolveCellSystems 86ms 0.59% 1.07% 5342ms 36.47% AbstractCardiacCell::ComputeExceptVoltage 104ms 0.71% 1.78% 4716ms 32.20% AbstractOneStepIvpOdeSolver::InternalSolve 163ms 1.11% 2.89% 4031ms 27.52% EulerIvpOdeSolver::CalculateNextYValue 856ms 5.84% 8.74% 3830ms 26.15% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1763ms 12.04% 20.78% 3568ms 24.36% __GI___exp 0 0% 20.78% 3293ms 22.48% MonodomainProblem::WriteOneStep 1ms 0.0068% 20.78% 3144ms 21.47% Hdf5DataWriter::PutVector 3ms 0.02% 20.80% 3119ms 21.30% H5Dwrite 6ms 0.041% 20.85% 3089ms 21.09% H5D__write 91ms 0.62% 21.47% 2794ms 19.08% AbstractCardiacTissue::UpdateCaches (inline) 754ms 5.15% 26.61% 2628ms 17.94% CellLuoRudy1991FromCellML::GetIIonic 0 0% 26.61% 1864ms 12.73% H5D__chunk_collective_write 17ms 0.12% 26.73% 1864ms 12.73% H5F_set_coll_metadata_reads 1417ms 9.67% 36.41% 1730ms 11.81% __ieee754_exp_fma 15ms 0.1% 36.51% 1678ms 11.46% H5FD_s3comms_uriencode 1ms 0.0068% 36.52% 1621ms 11.07% LinearSystem::Solve 1ms 0.0068% 36.52% 1521ms 10.39% KSPSolve 4ms 0.027% 36.55% 1520ms 10.38% KSPSolve_Private 4ms 0.027% 36.58% 1513ms 10.33% KSPSolve_CG 36ms 0.25% 36.82% 1368ms 9.34% 0 0% 36.82% 1368ms 9.34% H5F_block_write 2ms 0.014% 36.84% 1368ms 9.34% H5PB_write 1ms 0.0068% 36.84% 1365ms 9.32% H5F__accum_write 1ms 0.0068% 36.85% 1364ms 9.31% H5FD_write 3ms 0.02% 36.87% 1269ms 8.66% H5D__mpio_select_write 2ms 0.014% 36.88% 1177ms 8.04% PMPI_File_write_at_all 1159ms 7.91% 44.80% 1161ms 7.93% __GI_pwritev64 7ms 0.048% 44.85% 1107ms 7.56% H5D__chunk_cacheable 0 0% 44.85% 958ms 6.54% std::pow (inline) 89ms 0.61% 45.45% 956ms 6.53% __pow 317ms 2.16% 47.62% 924ms 6.31% H5S_select_iterate 0 0% 47.62% 870ms 5.94% PCApply 80ms 0.55% 48.16% 867ms 5.92% __ieee754_pow_fma 2ms 0.014% 48.18% 866ms 5.91% PCApply_BJacobi_Singleblock 0 0% 48.18% 827ms 5.65% KSPSolve_PREONLY 2ms 0.014% 48.19% 824ms 5.63% PCApply_ICC 0 0% 48.19% 822ms 5.61% MatSolve 808ms 5.52% 53.71% 822ms 5.61% MatSolve_SeqSBAIJ_1_NaturalOrdering 407ms 2.78% 56.49% 798ms 5.45% MonodomainSolver::SetupLinearSystem 67ms 0.46% 56.94% 621ms 4.24% H5D__chunk_set_sizes 0 0% 56.94% 554ms 3.78% KSP_PCApply.lto_priv.7 1ms 0.0068% 56.95% 523ms 3.57% MatMult 521ms 3.56% 60.51% 522ms 3.56% MatMult_SeqAIJ 436ms 2.98% 63.48% 436ms 2.98% log_inline (inline) 84ms 0.57% 64.06% 427ms 2.92% H5S_mpio_space_type 1ms 0.0068% 64.07% 396ms 2.70% KSPConvergedDefault 196ms 1.34% 65.40% 381ms 2.60% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 65.40% 318ms 2.17% KSP_PCApply 305ms 2.08% 67.49% 313ms 2.14% exp_inline (inline) 99ms 0.68% 68.16% 261ms 1.78% TimeStepper::TimeStepper 203ms 1.39% 69.55% 255ms 1.74% top12 (inline) 236ms 1.61% 71.16% 236ms 1.61% [libchaste_heart.so] 200ms 1.37% 72.52% 200ms 1.37% ddot_ 6ms 0.041% 72.57% 186ms 1.27% H5VM_chunk_index 50ms 0.34% 72.91% 183ms 1.25% AbstractCardiacCell::SetVoltage (partial-inline) 21ms 0.14% 73.05% 170ms 1.16% __GI___libc_free 14ms 0.096% 73.15% 165ms 1.13% ompi_datatype_destroy 8ms 0.055% 73.20% 164ms 1.12% MPI_Type_free 40ms 0.27% 73.47% 161ms 1.10% __GI___libc_malloc 156ms 1.07% 74.54% 156ms 1.07% TimeStepper::CalculateNextTime 156ms 1.07% 75.60% 156ms 1.07% asuint64 (inline) 116ms 0.79% 76.40% 155ms 1.06% _int_malloc 108ms 0.74% 77.13% 151ms 1.03% AbstractOneStepIvpOdeSolver::Solve 0 0% 77.13% 149ms 1.02% Hdf5DataWriter::PutUnlimitedVariable 47ms 0.32% 77.45% 149ms 1.02% _int_free 5ms 0.034% 77.49% 147ms 1.00% ompi_datatype_create 62ms 0.42% 77.91% 138ms 0.94% H5S_hyper_add_span_element 29ms 0.2% 78.11% 132ms 0.9% H5S_set_version 7ms 0.048% 78.16% 132ms 0.9% ompi_info_register_framework_params 34ms 0.23% 78.39% 131ms 0.89% ompi_datatype_release_args 109ms 0.74% 79.13% 128ms 0.87% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 125ms 0.85% 79.99% 125ms 0.85% __ieee754_log_fma 49ms 0.33% 80.32% 123ms 0.84% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 120ms 0.82% 81.14% 120ms 0.82% __memcpy_avx_unaligned_erms 0 0% 81.14% 119ms 0.81% VecTDot 2ms 0.014% 81.16% 117ms 0.8% VecNorm 0 0% 81.16% 117ms 0.8% VecTDot_Seq 1ms 0.0068% 81.16% 117ms 0.8% VecXDot_Seq_Private.constprop.0 0 0% 81.16% 111ms 0.76% VecNorm_Seq 91ms 0.62% 81.78% 108ms 0.74% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0068% 81.79% 104ms 0.71% PMPI_File_set_view 38ms 0.26% 82.05% 103ms 0.7% H5VM_array_calc 79ms 0.54% 82.59% 102ms 0.7% AbstractParameterisedSystem::GetAnyVariable 98ms 0.67% 83.26% 98ms 0.67% H5VM_array_offset_pre 3ms 0.02% 83.28% 98ms 0.67% PMPI_Type_create_resized 3ms 0.02% 83.30% 95ms 0.65% ompi_datatype_duplicate 90ms 0.61% 83.91% 90ms 0.61% H5VM_chunk_index_scaled 0 0% 83.91% 90ms 0.61% VecDuplicate 3ms 0.02% 83.93% 90ms 0.61% VecDuplicate_MPI 56ms 0.38% 84.32% 84ms 0.57% TimeStepper::AdvanceOneTimeStep 0 0% 84.32% 81ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 84.32% 81ms 0.55% std::vector::assign (inline) 1ms 0.0068% 84.32% 79ms 0.54% H5D__chunk_allocated 27ms 0.18% 84.51% 78ms 0.53% __libc_calloc 1ms 0.0068% 84.51% 77ms 0.53% H5D__select_write 2ms 0.014% 84.53% 77ms 0.53% opal_datatype_create_desc 4ms 0.027% 84.56% 76ms 0.52% H5D__contig_fill 0 0% 84.56% 76ms 0.52% H5Dgather 75ms 0.51% 85.07% 75ms 0.51% ReplicatableVector::operator[] 75ms 0.51% 85.58% 75ms 0.51% [libm.so.6] 1ms 0.0068% 85.59% 74ms 0.51% H5Pcreate