File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108517ms, 91.46% of 118644ms total Dropped 1166 nodes (cum <= 593.22ms) flat flat% sum% cum cum% 0 0% 0% 118629ms 100% __libc_start_call_main 0 0% 0% 118629ms 100% __libc_start_main_impl 0 0% 0% 118629ms 100% _start 0 0% 0% 118626ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118626ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118626ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118626ms 100% main 0 0% 0% 118587ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118586ms 100% AbstractConvergenceTester::Converge 0 0% 0% 118586ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118586ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118586ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118586ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0034% 0.0034% 117334ms 98.90% AbstractCardiacProblem::Solve 8ms 0.0067% 0.01% 116497ms 98.19% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0034% 0.013% 64913ms 54.71% LinearSystem::Solve 1ms 0.00084% 0.014% 64408ms 54.29% KSPSolve 4ms 0.0034% 0.018% 64408ms 54.29% KSPSolve_Private 15ms 0.013% 0.03% 64011ms 53.95% KSPSolve_SYMMLQ 211ms 0.18% 0.21% 42962ms 36.21% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.21% 36704ms 30.94% PCApply 1ms 0.00084% 0.21% 36696ms 30.93% PCApply_BJacobi_Singleblock 0 0% 0.21% 34329ms 28.93% KSPSolve_PREONLY (partial-inline) 1ms 0.00084% 0.21% 33163ms 27.95% PCApply_ICC 4ms 0.0034% 0.21% 33162ms 27.95% MatSolve 32666ms 27.53% 27.75% 33158ms 27.95% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1478ms 1.25% 28.99% 33087ms 27.89% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0034% 29.00% 31701ms 26.72% KSP_PCApply.lto_priv.18 6916ms 5.83% 34.83% 28604ms 24.11% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0051% 34.83% 21259ms 17.92% MatMult 10ms 0.0084% 34.84% 21253ms 17.91% MatMult_SeqAIJ 20708ms 17.45% 52.29% 21253ms 17.91% MatMult_SeqAIJ_Inode (inline) 1887ms 1.59% 53.88% 14813ms 12.49% CardiacNewtonSolver::Solve 400ms 0.34% 54.22% 9079ms 7.65% AbstractCardiacTissue::UpdateCaches (inline) 4402ms 3.71% 57.93% 8713ms 7.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2028ms 1.71% 59.64% 8487ms 7.15% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1104ms 0.93% 60.57% 7641ms 6.44% BidomainSolver::SetupLinearSystem 1292ms 1.09% 61.66% 7615ms 6.42% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0017% 61.66% 7143ms 6.02% KSP_PCApply (partial-inline) 6ms 0.0051% 61.67% 6515ms 5.49% KSPConvergedDefault 6080ms 5.12% 66.79% 6080ms 5.12% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3950ms 3.33% 70.12% 3998ms 3.37% __ieee754_log_fma 0 0% 70.12% 3801ms 3.20% boost::numeric::ublas::norm_inf (inline) 2635ms 2.22% 72.34% 3801ms 3.20% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.34% 3801ms 3.20% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.34% 3801ms 3.20% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 10ms 0.0084% 72.35% 3411ms 2.87% MatNullSpaceRemove 20ms 0.017% 72.37% 3202ms 2.70% std::pow (inline) 378ms 0.32% 72.69% 3171ms 2.67% __pow 3109ms 2.62% 75.31% 3109ms 2.62% __memcpy_avx_unaligned_erms 0 0% 75.31% 3065ms 2.58% PetscMemcpy (inline) 1679ms 1.42% 76.72% 2820ms 2.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 370ms 0.31% 77.03% 2784ms 2.35% __ieee754_pow_fma 2769ms 2.33% 79.37% 2769ms 2.33% ddot_ 18ms 0.015% 79.38% 2609ms 2.20% VecCopy 1ms 0.00084% 79.38% 2588ms 2.18% VecCopy_Seq (partial-inline) 15ms 0.013% 79.40% 2406ms 2.03% VecAXPY 11ms 0.0093% 79.40% 2391ms 2.02% VecAXPY_Seq 2362ms 1.99% 81.40% 2362ms 1.99% daxpy_ 3ms 0.0025% 81.40% 2209ms 1.86% VecDot 0 0% 81.40% 2206ms 1.86% VecDot_Seq 1ms 0.00084% 81.40% 2206ms 1.86% VecXDot_Seq_Private.constprop.0 1ms 0.00084% 81.40% 2065ms 1.74% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.40% 1917ms 1.62% VecMDot 10ms 0.0084% 81.41% 1917ms 1.62% VecMXDot_Private 1894ms 1.60% 83.00% 1902ms 1.60% VecMDot_Seq 32ms 0.027% 83.03% 1726ms 1.45% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1602ms 1.35% 84.38% 1657ms 1.40% exp_inline (inline) 10ms 0.0084% 84.39% 1484ms 1.25% VecMAXPY 1467ms 1.24% 85.63% 1474ms 1.24% VecMAXPY_Seq 0 0% 85.63% 1417ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1164ms 0.98% 86.61% 1164ms 0.98% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 2ms 0.0017% 86.61% 1155ms 0.97% KSP_RemoveNullSpace (inline) 3ms 0.0025% 86.61% 1132ms 0.95% boost::numeric::ublas::matrix_assign (inline) 194ms 0.16% 86.78% 1121ms 0.94% boost::numeric::ublas::indexing_matrix_assign 0 0% 86.78% 1103ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 86.78% 1103ms 0.93% CuboidMeshConstructor::Construct 0 0% 86.78% 1103ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 0 0% 86.78% 1083ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.78% 1083ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.78% 1083ms 0.91% boost_numeric_ublas_abs (inline) 1083ms 0.91% 87.69% 1083ms 0.91% std::abs (inline) 836ms 0.7% 88.39% 1082ms 0.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 998ms 0.84% 89.23% 998ms 0.84% __memset_avx2_unaligned_erms 4ms 0.0034% 89.24% 990ms 0.83% Element::Element 0 0% 89.24% 989ms 0.83% PetscMemzero (inline) 1ms 0.00084% 89.24% 975ms 0.82% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0025% 89.24% 931ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 10ms 0.0084% 89.25% 892ms 0.75% BidomainAssembler::ComputeMatrixTerm 2ms 0.0017% 89.25% 870ms 0.73% VecDuplicate 14ms 0.012% 89.26% 869ms 0.73% VecScale 10ms 0.0084% 89.27% 856ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 8ms 0.0067% 89.28% 855ms 0.72% VecScale_Seq 844ms 0.71% 89.99% 844ms 0.71% dscal_ 2ms 0.0017% 89.99% 827ms 0.7% VecNorm 822ms 0.69% 90.68% 822ms 0.69% [libchaste_heart.so] 1ms 0.00084% 90.68% 816ms 0.69% VecNorm_Seq 2ms 0.0017% 90.69% 762ms 0.64% BidomainProblem::WriteOneStep 12ms 0.01% 90.70% 733ms 0.62% PetscMallocA 8ms 0.0067% 90.70% 721ms 0.61% PetscMallocAlign (partial-inline) 707ms 0.6% 91.30% 707ms 0.6% log_inline (inline) 1ms 0.00084% 91.30% 652ms 0.55% AbstractBidomainSolver::FinaliseLinearSystem 195ms 0.16% 91.46% 649ms 0.55% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.46% 648ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 0 0% 91.46% 609ms 0.51% boost::numeric::ublas::matrix_slice::operator= (inline)