File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12675ms, 86.08% of 14724ms total Dropped 760 nodes (cum <= 73.62ms) flat flat% sum% cum cum% 0 0% 0% 14716ms 99.95% __libc_start_call_main 0 0% 0% 14716ms 99.95% __libc_start_main_impl 0 0% 0% 14716ms 99.95% _start 0 0% 0% 14714ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14714ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14714ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14714ms 99.93% main 0 0% 0% 14676ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14676ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14676ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14654ms 99.52% AbstractCardiacProblem::Solve 2ms 0.014% 0.027% 11243ms 76.36% AbstractDynamicLinearPdeSolver::Solve 39ms 0.26% 0.29% 8974ms 60.95% AbstractCardiacTissue::SolveCellSystems 106ms 0.72% 1.01% 5486ms 37.26% AbstractCardiacCell::ComputeExceptVoltage 87ms 0.59% 1.60% 4784ms 32.49% AbstractOneStepIvpOdeSolver::InternalSolve 117ms 0.79% 2.40% 4118ms 27.97% EulerIvpOdeSolver::CalculateNextYValue 941ms 6.39% 8.79% 3949ms 26.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1790ms 12.16% 20.95% 3598ms 24.44% __GI___exp 1ms 0.0068% 20.95% 3351ms 22.76% MonodomainProblem::WriteOneStep 2ms 0.014% 20.97% 3200ms 21.73% Hdf5DataWriter::PutVector 1ms 0.0068% 20.97% 3188ms 21.65% H5Dwrite 2ms 0.014% 20.99% 3152ms 21.41% H5D__write 102ms 0.69% 21.68% 2595ms 17.62% AbstractCardiacTissue::UpdateCaches (inline) 761ms 5.17% 26.85% 2450ms 16.64% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0068% 26.85% 1815ms 12.33% H5D__chunk_collective_write 17ms 0.12% 26.97% 1814ms 12.32% H5F_set_coll_metadata_reads 1582ms 10.74% 37.71% 1743ms 11.84% __ieee754_exp_fma 19ms 0.13% 37.84% 1621ms 11.01% H5FD_s3comms_uriencode 0 0% 37.84% 1533ms 10.41% LinearSystem::Solve 1ms 0.0068% 37.85% 1413ms 9.60% KSPSolve 5ms 0.034% 37.88% 1412ms 9.59% KSPSolve_Private 7ms 0.048% 37.93% 1394ms 9.47% KSPSolve_CG 57ms 0.39% 38.32% 1253ms 8.51% 0 0% 38.32% 1251ms 8.50% H5F_block_write 1ms 0.0068% 38.33% 1251ms 8.50% H5PB_write 2ms 0.014% 38.34% 1250ms 8.49% H5F__accum_write 1ms 0.0068% 38.35% 1248ms 8.48% H5FD_write 4ms 0.027% 38.37% 1231ms 8.36% H5D__chunk_cacheable 4ms 0.027% 38.40% 1161ms 7.89% H5D__mpio_select_write 440ms 2.99% 41.39% 1049ms 7.12% H5S_select_iterate 2ms 0.014% 41.40% 1049ms 7.12% PMPI_File_write_at_all 1014ms 6.89% 48.29% 1015ms 6.89% __GI_pwritev64 5ms 0.034% 48.32% 848ms 5.76% std::pow (inline) 78ms 0.53% 48.85% 843ms 5.73% __pow 1ms 0.0068% 48.86% 802ms 5.45% PCApply 2ms 0.014% 48.87% 799ms 5.43% PCApply_BJacobi_Singleblock 93ms 0.63% 49.50% 764ms 5.19% __ieee754_pow_fma 1ms 0.0068% 49.51% 758ms 5.15% KSPSolve_PREONLY 1ms 0.0068% 49.52% 752ms 5.11% PCApply_ICC 4ms 0.027% 49.54% 751ms 5.10% MatSolve 741ms 5.03% 54.58% 747ms 5.07% MatSolve_SeqSBAIJ_1_NaturalOrdering 335ms 2.28% 56.85% 718ms 4.88% MonodomainSolver::SetupLinearSystem 340ms 2.31% 59.16% 706ms 4.79% CellLuoRudy1991FromCellML::VerifyStateVariables 66ms 0.45% 59.61% 628ms 4.27% H5D__chunk_set_sizes 0 0% 59.61% 556ms 3.78% KSP_PCApply.lto_priv.7 2ms 0.014% 59.62% 524ms 3.56% MatMult 518ms 3.52% 63.14% 522ms 3.55% MatMult_SeqAIJ 48ms 0.33% 63.47% 435ms 2.95% H5S_mpio_space_type 352ms 2.39% 65.86% 352ms 2.39% log_inline (inline) 1ms 0.0068% 65.87% 311ms 2.11% KSPConvergedDefault 301ms 2.04% 67.91% 302ms 2.05% exp_inline (inline) 130ms 0.88% 68.79% 279ms 1.89% TimeStepper::TimeStepper 0 0% 68.79% 249ms 1.69% KSP_PCApply 24ms 0.16% 68.96% 209ms 1.42% H5VM_chunk_index 49ms 0.33% 69.29% 197ms 1.34% __GI___libc_malloc 190ms 1.29% 70.58% 190ms 1.29% std::isinf (inline) 185ms 1.26% 71.84% 185ms 1.26% [libchaste_heart.so] 36ms 0.24% 72.08% 185ms 1.26% __GI___libc_free 111ms 0.75% 72.83% 183ms 1.24% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 146ms 0.99% 73.83% 176ms 1.20% _int_malloc 11ms 0.075% 73.90% 174ms 1.18% ompi_datatype_destroy 97ms 0.66% 74.56% 173ms 1.17% top12 (inline) 6ms 0.041% 74.60% 171ms 1.16% MPI_Type_free 168ms 1.14% 75.74% 168ms 1.14% ddot_ 2ms 0.014% 75.75% 164ms 1.11% ompi_datatype_create 157ms 1.07% 76.82% 157ms 1.07% TimeStepper::CalculateNextTime 134ms 0.91% 77.73% 152ms 1.03% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.02% 77.75% 150ms 1.02% Hdf5DataWriter::PutUnlimitedVariable 57ms 0.39% 78.14% 149ms 1.01% _int_free 7ms 0.048% 78.19% 145ms 0.98% ompi_info_register_framework_params 27ms 0.18% 78.37% 144ms 0.98% ompi_datatype_release_args 111ms 0.75% 79.12% 142ms 0.96% AbstractOneStepIvpOdeSolver::Solve 17ms 0.12% 79.24% 133ms 0.9% H5S_set_version 4ms 0.027% 79.27% 125ms 0.85% PMPI_File_set_view 29ms 0.2% 79.46% 121ms 0.82% AbstractCardiacCell::SetVoltage (partial-inline) 46ms 0.31% 79.77% 116ms 0.79% H5VM_array_calc 2ms 0.014% 79.79% 114ms 0.77% PMPI_Type_create_resized 49ms 0.33% 80.12% 110ms 0.75% std::__cxx11::basic_string::basic_string 1ms 0.0068% 80.13% 109ms 0.74% VecNorm 0 0% 80.13% 108ms 0.73% VecTDot 1ms 0.0068% 80.13% 106ms 0.72% ompi_datatype_duplicate 105ms 0.71% 80.85% 105ms 0.71% __ieee754_log_fma 0 0% 80.85% 104ms 0.71% VecTDot_Seq 0 0% 80.85% 104ms 0.71% VecXDot_Seq_Private.constprop.0 101ms 0.69% 81.53% 101ms 0.69% H5VM_chunk_index_scaled 2ms 0.014% 81.55% 100ms 0.68% VecDuplicate 67ms 0.46% 82.00% 99ms 0.67% TimeStepper::AdvanceOneTimeStep 0 0% 82.00% 99ms 0.67% VecNorm_Seq 50ms 0.34% 82.34% 98ms 0.67% H5S_hyper_add_span_element 4ms 0.027% 82.37% 98ms 0.67% VecDuplicate_MPI 86ms 0.58% 82.95% 86ms 0.58% H5VM_array_offset_pre 72ms 0.49% 83.44% 84ms 0.57% AbstractParameterisedSystem::SetAnyVariable 82ms 0.56% 84.00% 82ms 0.56% asuint64 (inline) 2ms 0.014% 84.01% 82ms 0.56% opal_datatype_create_desc 82ms 0.56% 84.57% 82ms 0.56% std::vector::operator[] (inline) 41ms 0.28% 84.85% 81ms 0.55% AbstractCardiacCell::GetVoltage (partial-inline) 69ms 0.47% 85.32% 81ms 0.55% AbstractParameterisedSystem::GetAnyVariable 2ms 0.014% 85.33% 79ms 0.54% H5D__chunk_allocated 77ms 0.52% 85.85% 77ms 0.52% __memcpy_avx_unaligned_erms 16ms 0.11% 85.96% 77ms 0.52% opal_dss_print_buffer_contents 1ms 0.0068% 85.97% 74ms 0.5% H5D__select_write 17ms 0.12% 86.08% 74ms 0.5% ompi_datatype_set_args