File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12555ms, 84.51% of 14857ms total Dropped 780 nodes (cum <= 74.28ms) flat flat% sum% cum cum% 0 0% 0% 14846ms 99.93% __libc_start_call_main 0 0% 0% 14846ms 99.93% __libc_start_main_impl 0 0% 0% 14846ms 99.93% _start 0 0% 0% 14842ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14842ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14842ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14842ms 99.90% main 0 0% 0% 14800ms 99.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14800ms 99.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14800ms 99.62% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14776ms 99.45% AbstractCardiacProblem::Solve 2ms 0.013% 0.02% 11357ms 76.44% AbstractDynamicLinearPdeSolver::Solve 93ms 0.63% 0.65% 9000ms 60.58% AbstractCardiacTissue::SolveCellSystems 105ms 0.71% 1.35% 5372ms 36.16% AbstractCardiacCell::ComputeExceptVoltage 97ms 0.65% 2.01% 4675ms 31.47% AbstractOneStepIvpOdeSolver::InternalSolve 178ms 1.20% 3.20% 4019ms 27.05% EulerIvpOdeSolver::CalculateNextYValue 883ms 5.94% 9.15% 3790ms 25.51% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1779ms 11.97% 21.12% 3457ms 23.27% __GI___exp 0 0% 21.12% 3349ms 22.54% MonodomainProblem::WriteOneStep 0 0% 21.12% 3212ms 21.62% Hdf5DataWriter::PutVector 2ms 0.013% 21.13% 3199ms 21.53% H5Dwrite 1ms 0.0067% 21.14% 3174ms 21.36% H5D__write 152ms 1.02% 22.16% 2926ms 19.69% AbstractCardiacTissue::UpdateCaches (inline) 800ms 5.38% 27.55% 2627ms 17.68% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.56% 1918ms 12.91% H5D__chunk_collective_write 18ms 0.12% 27.68% 1916ms 12.90% H5F_set_coll_metadata_reads 18ms 0.12% 27.81% 1688ms 11.36% H5FD_s3comms_uriencode 1325ms 8.92% 36.72% 1609ms 10.83% __ieee754_exp_fma 1ms 0.0067% 36.73% 1579ms 10.63% LinearSystem::Solve 0 0% 36.73% 1456ms 9.80% KSPSolve 2ms 0.013% 36.74% 1456ms 9.80% KSPSolve_Private 1ms 0.0067% 36.75% 1449ms 9.75% KSPSolve_CG 41ms 0.28% 37.03% 1336ms 8.99% 1ms 0.0067% 37.03% 1333ms 8.97% H5F_block_write 1ms 0.0067% 37.04% 1332ms 8.97% H5PB_write 1ms 0.0067% 37.05% 1331ms 8.96% H5F__accum_write 2ms 0.013% 37.06% 1330ms 8.95% H5FD_write 3ms 0.02% 37.08% 1254ms 8.44% H5D__mpio_select_write 1ms 0.0067% 37.09% 1161ms 7.81% PMPI_File_write_at_all 9ms 0.061% 37.15% 1144ms 7.70% H5D__chunk_cacheable 1130ms 7.61% 44.75% 1134ms 7.63% __GI_pwritev64 2ms 0.013% 44.77% 975ms 6.56% std::pow (inline) 82ms 0.55% 45.32% 972ms 6.54% __pow 324ms 2.18% 47.50% 970ms 6.53% H5S_select_iterate 78ms 0.53% 48.02% 889ms 5.98% __ieee754_pow_fma 3ms 0.02% 48.04% 843ms 5.67% PCApply 0 0% 48.04% 836ms 5.63% PCApply_BJacobi_Singleblock 1ms 0.0067% 48.05% 810ms 5.45% KSPSolve_PREONLY 1ms 0.0067% 48.06% 802ms 5.40% MatSolve 0 0% 48.06% 802ms 5.40% PCApply_ICC 795ms 5.35% 53.41% 801ms 5.39% MatSolve_SeqSBAIJ_1_NaturalOrdering 318ms 2.14% 55.55% 753ms 5.07% MonodomainSolver::SetupLinearSystem 67ms 0.45% 56.00% 655ms 4.41% H5D__chunk_set_sizes 1ms 0.0067% 56.01% 645ms 4.34% KSP_PCApply.lto_priv.7 1ms 0.0067% 56.01% 567ms 3.82% MatMult 564ms 3.80% 59.81% 566ms 3.81% MatMult_SeqAIJ 477ms 3.21% 63.02% 477ms 3.21% log_inline (inline) 85ms 0.57% 63.59% 474ms 3.19% H5S_mpio_space_type 197ms 1.33% 64.92% 416ms 2.80% CellLuoRudy1991FromCellML::VerifyStateVariables 284ms 1.91% 66.83% 293ms 1.97% exp_inline (inline) 289ms 1.95% 68.78% 289ms 1.95% [libchaste_heart.so] 104ms 0.7% 69.48% 268ms 1.80% TimeStepper::TimeStepper 0 0% 69.48% 260ms 1.75% KSPConvergedDefault 188ms 1.27% 70.74% 232ms 1.56% top12 (inline) 13ms 0.088% 70.83% 222ms 1.49% H5VM_chunk_index 47ms 0.32% 71.14% 215ms 1.45% __GI___libc_malloc 1ms 0.0067% 71.15% 202ms 1.36% KSP_PCApply 162ms 1.09% 72.24% 197ms 1.33% _int_malloc 38ms 0.26% 72.50% 174ms 1.17% AbstractCardiacCell::SetVoltage (partial-inline) 171ms 1.15% 73.65% 171ms 1.15% ddot_ 133ms 0.9% 74.54% 163ms 1.10% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 115ms 0.77% 75.32% 162ms 1.09% AbstractOneStepIvpOdeSolver::Solve 3ms 0.02% 75.34% 155ms 1.04% ompi_datatype_create 7ms 0.047% 75.39% 154ms 1.04% MPI_Type_free 9ms 0.061% 75.45% 153ms 1.03% ompi_datatype_destroy 152ms 1.02% 76.47% 152ms 1.02% TimeStepper::CalculateNextTime 21ms 0.14% 76.61% 151ms 1.02% __GI___libc_free 146ms 0.98% 77.59% 146ms 0.98% asuint64 (inline) 2ms 0.013% 77.61% 137ms 0.92% Hdf5DataWriter::PutUnlimitedVariable 28ms 0.19% 77.79% 136ms 0.92% H5S_set_version 47ms 0.32% 78.11% 131ms 0.88% H5S_hyper_add_span_element 45ms 0.3% 78.41% 130ms 0.88% _int_free 5ms 0.034% 78.45% 130ms 0.88% ompi_info_register_framework_params 37ms 0.25% 78.70% 129ms 0.87% ompi_datatype_release_args 99ms 0.67% 79.36% 114ms 0.77% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0067% 79.37% 110ms 0.74% VecNorm 46ms 0.31% 79.68% 109ms 0.73% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 109ms 0.73% 80.41% 109ms 0.73% H5VM_chunk_index_scaled 47ms 0.32% 80.73% 108ms 0.73% H5VM_array_calc 107ms 0.72% 81.45% 107ms 0.72% __memcpy_avx_unaligned_erms 0 0% 81.45% 106ms 0.71% VecNorm_Seq 4ms 0.027% 81.48% 105ms 0.71% PMPI_File_set_view 80ms 0.54% 82.02% 104ms 0.7% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 82.02% 104ms 0.7% VecDuplicate 3ms 0.02% 82.04% 103ms 0.69% VecDuplicate_MPI 102ms 0.69% 82.73% 102ms 0.69% __ieee754_log_fma 101ms 0.68% 83.41% 101ms 0.68% H5VM_array_offset_pre 2ms 0.013% 83.42% 100ms 0.67% VecTDot 1ms 0.0067% 83.43% 98ms 0.66% VecTDot_Seq 0 0% 83.43% 97ms 0.65% VecXDot_Seq_Private.constprop.0 2ms 0.013% 83.44% 93ms 0.63% PMPI_Type_create_resized 3ms 0.02% 83.46% 84ms 0.57% ompi_datatype_duplicate 82ms 0.55% 84.01% 82ms 0.55% std::isinf (inline) 24ms 0.16% 84.18% 80ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 49ms 0.33% 84.51% 76ms 0.51% TimeStepper::AdvanceOneTimeStep