File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 425ms, 87.81% of 484ms total Dropped 203 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 476ms 98.35% __libc_start_call_main 0 0% 0% 476ms 98.35% __libc_start_main_impl 0 0% 0% 476ms 98.35% _start 0 0% 0% 473ms 97.73% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runAllTests 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 473ms 97.73% main 0 0% 0% 430ms 88.84% CxxTest::RealTestDescription::run 0 0% 0% 430ms 88.84% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 430ms 88.84% CxxTest::TestRunner::runTest (inline) 0 0% 0% 430ms 88.84% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 430ms 88.84% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 424ms 87.60% AbstractCardiacProblem::Solve 0 0% 0% 424ms 87.60% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 380ms 78.51% LinearSystem::Solve 0 0% 0% 379ms 78.31% KSPSolve 0 0% 0% 379ms 78.31% KSPSolve_Private 0 0% 0% 378ms 78.10% KSPSolve_CG 0 0% 0% 225ms 46.49% KSP_PCApply.lto_priv.7 0 0% 0% 214ms 44.21% PCApply 0 0% 0% 214ms 44.21% PCApply_BJacobi_Singleblock 0 0% 0% 187ms 38.64% KSPSolve_PREONLY (partial-inline) 1ms 0.21% 0.21% 180ms 37.19% MatSolve 0 0% 0.21% 180ms 37.19% PCApply_ICC 177ms 36.57% 36.78% 179ms 36.98% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.21% 36.98% 76ms 15.70% MatMult 0 0% 36.98% 75ms 15.50% MatMult_SeqAIJ 75ms 15.50% 52.48% 75ms 15.50% MatMult_SeqAIJ_Inode (inline) 53ms 10.95% 63.43% 53ms 10.95% ddot_ 0 0% 63.43% 43ms 8.88% VecTDot 0 0% 63.43% 43ms 8.88% VecTDot_Seq 0 0% 63.43% 43ms 8.88% VecXDot_Seq_Private.constprop.0 0 0% 63.43% 39ms 8.06% AbstractCardiacTissue::SolveCellSystems 0 0% 63.43% 39ms 8.06% CxxTest::RealWorldDescription::setUp 0 0% 63.43% 39ms 8.06% PMPI_Init_thread 0 0% 63.43% 39ms 8.06% PetscInitialize 0 0% 63.43% 39ms 8.06% PetscSetup::setUpWorld 0 0% 63.43% 39ms 8.06% PetscSetupUtils::CommonSetup 0 0% 63.43% 39ms 8.06% PetscSetupUtils::InitialisePetsc 0 0% 63.43% 39ms 8.06% ompi_mpi_init 1ms 0.21% 63.64% 31ms 6.40% 1ms 0.21% 63.84% 31ms 6.40% MatNullSpaceRemove 0 0% 63.84% 23ms 4.75% orte_init 1ms 0.21% 64.05% 22ms 4.55% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.21% 64.26% 20ms 4.13% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.21% 64.46% 19ms 3.93% VecMAXPY 16ms 3.31% 67.77% 18ms 3.72% VecMAXPY_Seq 7ms 1.45% 69.21% 17ms 3.51% __GI___exp 0 0% 69.21% 17ms 3.51% mca_base_framework_open 0 0% 69.21% 16ms 3.31% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 69.21% 16ms 3.31% __GI__dl_catch_exception 0 0% 69.21% 16ms 3.31% _dl_catch_error 0 0% 69.21% 16ms 3.31% _dlerror_run 4ms 0.83% 70.04% 15ms 3.10% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.21% 70.25% 15ms 3.10% EulerIvpOdeSolver::CalculateNextYValue 0 0% 70.25% 15ms 3.10% hwloc_topology_load 0 0% 70.25% 15ms 3.10% mca_base_framework_components_register 0 0% 70.25% 15ms 3.10% mca_base_framework_register 3ms 0.62% 70.87% 14ms 2.89% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.87% 14ms 2.89% opal_stackframe_output 0 0% 70.87% 13ms 2.69% ___dlopen 0 0% 70.87% 13ms 2.69% _dl_open 0 0% 70.87% 13ms 2.69% dl_open_worker 0 0% 70.87% 13ms 2.69% dlopen_doit 0 0% 70.87% 13ms 2.69% dlopen_implementation (inline) 0 0% 70.87% 13ms 2.69% hwloc_linux_get_tid_last_cpu_location 0 0% 70.87% 12ms 2.48% VecAYPX 12ms 2.48% 73.35% 12ms 2.48% VecAYPX_Seq 0 0% 73.35% 12ms 2.48% _dl_init 0 0% 73.35% 12ms 2.48% call_init (inline) 1ms 0.21% 73.55% 12ms 2.48% mca_base_component_find 0 0% 73.55% 11ms 2.27% VecAXPY 0 0% 73.55% 11ms 2.27% VecAXPY_Seq 0 0% 73.55% 11ms 2.27% VecMDot 11ms 2.27% 75.83% 11ms 2.27% VecMDot_Seq 0 0% 75.83% 11ms 2.27% VecMXDot_Private 0 0% 75.83% 11ms 2.27% VecNorm 0 0% 75.83% 11ms 2.27% VecNorm_Seq 11ms 2.27% 78.10% 11ms 2.27% daxpy_ 0 0% 78.10% 11ms 2.27% mca_base_component_repository_open 8ms 1.65% 79.75% 10ms 2.07% __ieee754_exp_fma 0 0% 79.75% 9ms 1.86% KSP_PCApply (partial-inline) 0 0% 79.75% 9ms 1.86% dl_open_worker_begin 0 0% 79.75% 8ms 1.65% _dl_start_user 1ms 0.21% 79.96% 8ms 1.65% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 79.96% 8ms 1.65% boost::serialization::singleton::get_instance 0 0% 79.96% 7ms 1.45% mca_base_framework_components_open 0 0% 79.96% 7ms 1.45% mca_topo_base_dist_graph_neighbors_count 0 0% 79.96% 6ms 1.24% VecDestroy 0 0% 79.96% 6ms 1.24% _dl_map_object 1ms 0.21% 80.17% 6ms 1.24% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 80.17% 6ms 1.24% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 80.17% 6ms 1.24% opal_hwloc_base_get_topology 0 0% 80.17% 6ms 1.24% orte_ess_base_proc_binding 5ms 1.03% 81.20% 5ms 1.03% __memcpy_avx_unaligned_erms 5ms 1.03% 82.23% 5ms 1.03% __strcmp_avx2 1ms 0.21% 82.44% 5ms 1.03% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 82.44% 5ms 1.03% mca_base_var_group_register 0 0% 82.44% 5ms 1.03% mca_base_var_register 0 0% 82.44% 4ms 0.83% AbstractCardiacProblem::Initialise 0 0% 82.44% 4ms 0.83% BidomainSolver::SetupLinearSystem 0 0% 82.44% 4ms 0.83% CxxTest::RealWorldDescription::tearDown 0 0% 82.44% 4ms 0.83% PetscFinalize 0 0% 82.44% 4ms 0.83% PetscHeaderDestroy_Private 0 0% 82.44% 4ms 0.83% PetscMemcpy (inline) 0 0% 82.44% 4ms 0.83% PetscSetup::tearDownWorld 0 0% 82.44% 4ms 0.83% PetscSetupUtils::CommonFinalize 4ms 0.83% 83.26% 4ms 0.83% __GI___clock_nanosleep 0 0% 83.26% 4ms 0.83% __GI___libc_free 0 0% 83.26% 4ms 0.83% __GI___nanosleep 1ms 0.21% 83.47% 4ms 0.83% __cxa_finalize 1ms 0.21% 83.68% 4ms 0.83% __pow 0 0% 83.68% 4ms 0.83% _dl_call_fini 0 0% 83.68% 4ms 0.83% _dl_lookup_symbol_x 0 0% 83.68% 4ms 0.83% _dl_map_object_from_fd 2ms 0.41% 84.09% 4ms 0.83% _int_free 3ms 0.62% 84.71% 4ms 0.83% do_lookup_x 0 0% 84.71% 4ms 0.83% mca_base_framework_close 0 0% 84.71% 4ms 0.83% ompi_mpi_finalize 0 0% 84.71% 4ms 0.83% opal_timer_base_get_freq 0 0% 84.71% 4ms 0.83% std::pow (inline) 0 0% 84.71% 4ms 0.83% usleep 0 0% 84.71% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.21% 84.92% 3ms 0.62% PetscCommDestroy 0 0% 84.92% 3ms 0.62% VecCreate 0 0% 84.92% 3ms 0.62% VecDuplicate 0 0% 84.92% 3ms 0.62% VecDuplicate_Seq 0 0% 84.92% 3ms 0.62% XOpenDisplay 0 0% 84.92% 3ms 0.62% [hwloc_gl.so] 0 0% 84.92% 3ms 0.62% [hwloc_pci.so] 0 0% 84.92% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 1ms 0.21% 85.12% 3ms 0.62% _XConnectXCB 3ms 0.62% 85.74% 3ms 0.62% __GI___libc_read 0 0% 85.74% 3ms 0.62% __GI_exit 2ms 0.41% 86.16% 3ms 0.62% __GI_getenv 0 0% 86.16% 3ms 0.62% __dlclose 0 0% 86.16% 3ms 0.62% __ieee754_pow_fma 3ms 0.62% 86.78% 3ms 0.62% __memset_avx2_unaligned_erms 0 0% 86.78% 3ms 0.62% __run_exit_handlers 0 0% 86.78% 3ms 0.62% _dl_close 0 0% 86.78% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.78% 3ms 0.62% _dl_fini 2ms 0.41% 87.19% 3ms 0.62% _dl_fixup 0 0% 87.19% 3ms 0.62% _dl_map_segments (inline) 0 0% 87.19% 3ms 0.62% _dl_open_relocate_one_object (inline) 0 0% 87.19% 3ms 0.62% _dl_relocate_object 0 0% 87.19% 3ms 0.62% _dl_runtime_resolve_xsavec 0 0% 87.19% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.19% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 87.19% 3ms 0.62% elf_machine_rela (inline) 3ms 0.62% 87.81% 3ms 0.62% log_inline (inline) 0 0% 87.81% 3ms 0.62% mca_base_component_repository_release 0 0% 87.81% 3ms 0.62% mca_base_component_var_register 0 0% 87.81% 3ms 0.62% mca_base_components_close 0 0% 87.81% 3ms 0.62% resolve_map (inline)