File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119086ms, 91.32% of 130412ms total Dropped 1162 nodes (cum <= 652.06ms) flat flat% sum% cum cum% 0 0% 0% 130396ms 100% __libc_start_call_main 0 0% 0% 130396ms 100% __libc_start_main_impl 0 0% 0% 130396ms 100% _start 0 0% 0% 130393ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 130393ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 130393ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 130393ms 100% main 0 0% 0% 130355ms 100% AbstractConvergenceTester::Converge 0 0% 0% 130355ms 100% CxxTest::RealTestDescription::run 0 0% 0% 130355ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 130355ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 130355ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 130355ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 9ms 0.0069% 0.0069% 129158ms 99.04% AbstractCardiacProblem::Solve 5ms 0.0038% 0.011% 128356ms 98.42% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0023% 0.013% 69429ms 53.24% LinearSystem::Solve 4ms 0.0031% 0.016% 69000ms 52.91% KSPSolve 16ms 0.012% 0.028% 68997ms 52.91% KSPSolve_Private 8ms 0.0061% 0.035% 68639ms 52.63% KSPSolve_SYMMLQ 505ms 0.39% 0.42% 49658ms 38.08% AbstractCardiacTissue::SolveCellSystems 9ms 0.0069% 0.43% 39570ms 30.34% PCApply 4ms 0.0031% 0.43% 39558ms 30.33% PCApply_BJacobi_Singleblock 973ms 0.75% 1.18% 39391ms 30.21% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.18% 37173ms 28.50% KSPSolve_PREONLY (partial-inline) 5ms 0.0038% 1.18% 36050ms 27.64% PCApply_ICC 4ms 0.0031% 1.18% 36045ms 27.64% MatSolve 35672ms 27.35% 28.54% 36041ms 27.64% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 7607ms 5.83% 34.37% 34959ms 26.81% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 4ms 0.0031% 34.37% 33823ms 25.94% KSP_PCApply.lto_priv.18 16ms 0.012% 34.39% 23074ms 17.69% MatMult 305ms 0.23% 34.62% 23058ms 17.68% MatMult_SeqAIJ (partial-inline) 22562ms 17.30% 51.92% 23056ms 17.68% MatMult_SeqAIJ_Inode (inline) 2220ms 1.70% 53.62% 17191ms 13.18% CardiacNewtonSolver::Solve 1696ms 1.30% 54.92% 11459ms 8.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5835ms 4.47% 59.40% 10384ms 7.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 9487ms 7.27% 66.67% 9487ms 7.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 157ms 0.12% 66.79% 8675ms 6.65% AbstractCardiacTissue::UpdateCaches (inline) 1676ms 1.29% 68.08% 8304ms 6.37% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1190ms 0.91% 68.99% 8096ms 6.21% BidomainSolver::SetupLinearSystem 2ms 0.0015% 68.99% 7755ms 5.95% KSP_PCApply (partial-inline) 6ms 0.0046% 69.00% 7275ms 5.58% KSPConvergedDefault 4263ms 3.27% 72.27% 4360ms 3.34% __ieee754_log_fma 0 0% 72.27% 4069ms 3.12% boost::numeric::ublas::norm_inf (inline) 2761ms 2.12% 74.38% 4069ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.38% 4069ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.38% 4069ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 1ms 0.00077% 74.38% 3376ms 2.59% MatNullSpaceRemove 3356ms 2.57% 76.96% 3356ms 2.57% ddot_ 2135ms 1.64% 78.59% 3263ms 2.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3000ms 2.30% 80.89% 3000ms 2.30% __memcpy_avx_unaligned_erms 0 0% 80.89% 2962ms 2.27% PetscMemcpy (inline) 40ms 0.031% 80.93% 2951ms 2.26% std::pow (inline) 382ms 0.29% 81.22% 2897ms 2.22% __pow 10ms 0.0077% 81.23% 2738ms 2.10% VecDot 1ms 0.00077% 81.23% 2728ms 2.09% VecDot_Seq 3ms 0.0023% 81.23% 2727ms 2.09% VecXDot_Seq_Private.constprop.0 16ms 0.012% 81.24% 2617ms 2.01% VecCopy 3ms 0.0023% 81.24% 2595ms 1.99% VecCopy_Seq (partial-inline) 324ms 0.25% 81.49% 2486ms 1.91% __ieee754_pow_fma 12ms 0.0092% 81.50% 2245ms 1.72% VecAXPY 7ms 0.0054% 81.51% 2233ms 1.71% VecAXPY_Seq 2208ms 1.69% 83.20% 2208ms 1.69% daxpy_ 3ms 0.0023% 83.20% 2054ms 1.58% VecMDot 17ms 0.013% 83.21% 2051ms 1.57% VecMXDot_Private 2028ms 1.56% 84.77% 2029ms 1.56% VecMDot_Seq 0 0% 84.77% 2018ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 21ms 0.016% 84.79% 1682ms 1.29% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1464ms 1.12% 85.91% 1514ms 1.16% exp_inline (inline) 0 0% 85.91% 1407ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 7ms 0.0054% 85.91% 1321ms 1.01% VecMAXPY 1307ms 1.00% 86.92% 1314ms 1.01% VecMAXPY_Seq 0 0% 86.92% 1294ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.92% 1294ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.92% 1294ms 0.99% boost_numeric_ublas_abs (inline) 1294ms 0.99% 87.91% 1294ms 0.99% std::abs (inline) 5ms 0.0038% 87.91% 1120ms 0.86% boost::numeric::ublas::matrix_assign (inline) 224ms 0.17% 88.08% 1108ms 0.85% boost::numeric::ublas::indexing_matrix_assign 2ms 0.0015% 88.09% 1072ms 0.82% KSP_RemoveNullSpace (inline) 705ms 0.54% 88.63% 1038ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.63% 1029ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.63% 1029ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.63% 1029ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 1ms 0.00077% 88.63% 912ms 0.7% Element::Element 897ms 0.69% 89.31% 897ms 0.69% [libchaste_heart.so] 9ms 0.0069% 89.32% 893ms 0.68% BidomainAssembler::ComputeMatrixTerm 6ms 0.0046% 89.33% 883ms 0.68% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0015% 89.33% 879ms 0.67% VecNorm 0 0% 89.33% 870ms 0.67% VecNorm_Seq 860ms 0.66% 89.99% 860ms 0.66% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 2ms 0.0015% 89.99% 848ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0046% 89.99% 847ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0038% 90.00% 804ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 4ms 0.0031% 90.00% 804ms 0.62% VecScale 4ms 0.0031% 90.00% 800ms 0.61% VecScale_Seq 170ms 0.13% 90.13% 797ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 795ms 0.61% 90.74% 795ms 0.61% dscal_ 746ms 0.57% 91.32% 746ms 0.57% __memset_avx2_unaligned_erms 0 0% 91.32% 729ms 0.56% PetscMemzero (inline) 0 0% 91.32% 726ms 0.56% BidomainProblem::WriteOneStep 0 0% 91.32% 678ms 0.52% VecDuplicate