File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12791ms, 85.79% of 14910ms total Dropped 768 nodes (cum <= 74.55ms) flat flat% sum% cum cum% 0 0% 0% 14900ms 99.93% __libc_start_call_main 0 0% 0% 14900ms 99.93% __libc_start_main_impl 0 0% 0% 14900ms 99.93% _start 0 0% 0% 14897ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14897ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14897ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14897ms 99.91% main 0 0% 0% 14856ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14856ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14856ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14833ms 99.48% AbstractCardiacProblem::Solve 1ms 0.0067% 0.0067% 11449ms 76.79% AbstractDynamicLinearPdeSolver::Solve 142ms 0.95% 0.96% 9062ms 60.78% AbstractCardiacTissue::SolveCellSystems 102ms 0.68% 1.64% 5434ms 36.45% AbstractCardiacCell::ComputeExceptVoltage 120ms 0.8% 2.45% 4734ms 31.75% AbstractOneStepIvpOdeSolver::InternalSolve 134ms 0.9% 3.35% 4073ms 27.32% EulerIvpOdeSolver::CalculateNextYValue 888ms 5.96% 9.30% 3897ms 26.14% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1818ms 12.19% 21.50% 3593ms 24.10% __GI___exp 2ms 0.013% 21.51% 3322ms 22.28% MonodomainProblem::WriteOneStep 0 0% 21.51% 3177ms 21.31% H5Dwrite 0 0% 21.51% 3169ms 21.25% Hdf5DataWriter::PutVector 3ms 0.02% 21.53% 3160ms 21.19% H5D__write 93ms 0.62% 22.15% 2822ms 18.93% AbstractCardiacTissue::UpdateCaches (inline) 797ms 5.35% 27.50% 2649ms 17.77% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.50% 1926ms 12.92% H5D__chunk_collective_write 28ms 0.19% 27.69% 1926ms 12.92% H5F_set_coll_metadata_reads 1383ms 9.28% 36.96% 1697ms 11.38% __ieee754_exp_fma 10ms 0.067% 37.03% 1691ms 11.34% H5FD_s3comms_uriencode 1ms 0.0067% 37.04% 1613ms 10.82% LinearSystem::Solve 0 0% 37.04% 1484ms 9.95% KSPSolve 4ms 0.027% 37.06% 1484ms 9.95% KSPSolve_Private 7ms 0.047% 37.11% 1476ms 9.90% KSPSolve_CG 43ms 0.29% 37.40% 1336ms 8.96% 4ms 0.027% 37.42% 1329ms 8.91% H5F_block_write 1ms 0.0067% 37.43% 1325ms 8.89% H5PB_write 1ms 0.0067% 37.44% 1324ms 8.88% H5F__accum_write 0 0% 37.44% 1323ms 8.87% H5FD_write 0 0% 37.44% 1234ms 8.28% H5D__mpio_select_write 0 0% 37.44% 1134ms 7.61% PMPI_File_write_at_all 9ms 0.06% 37.50% 1122ms 7.53% H5D__chunk_cacheable 1115ms 7.48% 44.98% 1117ms 7.49% __GI_pwritev64 317ms 2.13% 47.10% 978ms 6.56% H5S_select_iterate 2ms 0.013% 47.12% 968ms 6.49% std::pow (inline) 103ms 0.69% 47.81% 964ms 6.47% __pow 93ms 0.62% 48.43% 861ms 5.77% __ieee754_pow_fma 3ms 0.02% 48.45% 841ms 5.64% PCApply 1ms 0.0067% 48.46% 839ms 5.63% PCApply_BJacobi_Singleblock 0 0% 48.46% 803ms 5.39% KSPSolve_PREONLY 1ms 0.0067% 48.46% 797ms 5.35% PCApply_ICC 2ms 0.013% 48.48% 796ms 5.34% MatSolve 783ms 5.25% 53.73% 794ms 5.33% MatSolve_SeqSBAIJ_1_NaturalOrdering 352ms 2.36% 56.09% 752ms 5.04% MonodomainSolver::SetupLinearSystem 77ms 0.52% 56.61% 673ms 4.51% H5D__chunk_set_sizes 2ms 0.013% 56.62% 610ms 4.09% KSP_PCApply.lto_priv.7 3ms 0.02% 56.64% 601ms 4.03% MatMult 597ms 4.00% 60.64% 598ms 4.01% MatMult_SeqAIJ 56ms 0.38% 61.02% 455ms 3.05% H5S_mpio_space_type 217ms 1.46% 62.47% 431ms 2.89% CellLuoRudy1991FromCellML::VerifyStateVariables 415ms 2.78% 65.26% 415ms 2.78% log_inline (inline) 314ms 2.11% 67.36% 319ms 2.14% exp_inline (inline) 1ms 0.0067% 67.37% 290ms 1.95% KSPConvergedDefault 108ms 0.72% 68.10% 250ms 1.68% TimeStepper::TimeStepper 209ms 1.40% 69.50% 249ms 1.67% top12 (inline) 1ms 0.0067% 69.50% 236ms 1.58% KSP_PCApply 232ms 1.56% 71.06% 232ms 1.56% [libchaste_heart.so] 12ms 0.08% 71.14% 216ms 1.45% H5VM_chunk_index 54ms 0.36% 71.50% 208ms 1.40% __GI___libc_malloc 156ms 1.05% 72.55% 199ms 1.33% _int_malloc 51ms 0.34% 72.89% 195ms 1.31% AbstractCardiacCell::SetVoltage (partial-inline) 31ms 0.21% 73.10% 195ms 1.31% __GI___libc_free 6ms 0.04% 73.14% 188ms 1.26% ompi_datatype_destroy 4ms 0.027% 73.17% 182ms 1.22% MPI_Type_free 59ms 0.4% 73.56% 164ms 1.10% _int_free 6ms 0.04% 73.60% 160ms 1.07% ompi_datatype_create 157ms 1.05% 74.65% 157ms 1.05% ddot_ 2ms 0.013% 74.67% 151ms 1.01% Hdf5DataWriter::PutUnlimitedVariable 1ms 0.0067% 74.67% 151ms 1.01% ompi_info_register_framework_params 62ms 0.42% 75.09% 150ms 1.01% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 40ms 0.27% 75.36% 150ms 1.01% ompi_datatype_release_args 44ms 0.3% 75.65% 149ms 1% H5S_set_version 124ms 0.83% 76.49% 148ms 0.99% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 145ms 0.97% 77.46% 145ms 0.97% TimeStepper::CalculateNextTime 144ms 0.97% 78.42% 144ms 0.97% asuint64 (inline) 89ms 0.6% 79.02% 133ms 0.89% AbstractOneStepIvpOdeSolver::Solve 99ms 0.66% 79.68% 128ms 0.86% AbstractParameterisedSystem::SetAnyVariable 89ms 0.6% 80.28% 122ms 0.82% AbstractParameterisedSystem::GetAnyVariable 118ms 0.79% 81.07% 118ms 0.79% __memcpy_avx_unaligned_erms 57ms 0.38% 81.46% 113ms 0.76% H5S_hyper_add_span_element 1ms 0.0067% 81.46% 112ms 0.75% PMPI_File_set_view 110ms 0.74% 82.20% 110ms 0.74% H5VM_chunk_index_scaled 1ms 0.0067% 82.21% 109ms 0.73% VecNorm 44ms 0.3% 82.50% 105ms 0.7% H5VM_array_calc 1ms 0.0067% 82.51% 102ms 0.68% VecNorm_Seq 0 0% 82.51% 101ms 0.68% VecDuplicate 3ms 0.02% 82.53% 101ms 0.68% VecDuplicate_MPI 96ms 0.64% 83.17% 96ms 0.64% H5VM_array_offset_pre 2ms 0.013% 83.19% 96ms 0.64% PMPI_Type_create_resized 96ms 0.64% 83.83% 96ms 0.64% __ieee754_log_fma 37ms 0.25% 84.08% 91ms 0.61% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 84.10% 90ms 0.6% ompi_datatype_duplicate 0 0% 84.10% 87ms 0.58% VecTDot 0 0% 84.10% 87ms 0.58% VecTDot_Seq 1ms 0.0067% 84.10% 87ms 0.58% VecXDot_Seq_Private.constprop.0 31ms 0.21% 84.31% 86ms 0.58% ompi_datatype_set_args 3ms 0.02% 84.33% 85ms 0.57% MPI_Type_contiguous 0 0% 84.33% 85ms 0.57% std::vector::_M_assign_aux (inline) 0 0% 84.33% 85ms 0.57% std::vector::assign (inline) 52ms 0.35% 84.68% 81ms 0.54% TimeStepper::AdvanceOneTimeStep 79ms 0.53% 85.21% 79ms 0.53% [libm.so.6] 2ms 0.013% 85.22% 77ms 0.52% opal_datatype_create_desc 8ms 0.054% 85.28% 77ms 0.52% opal_dss_print_buffer_contents 76ms 0.51% 85.79% 76ms 0.51% std::isinf (inline)