File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 399ms, 89.66% of 445ms total Dropped 170 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 438ms 98.43% __libc_start_call_main 0 0% 0% 438ms 98.43% __libc_start_main_impl 0 0% 0% 438ms 98.43% _start 0 0% 0% 435ms 97.75% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runAllTests 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 435ms 97.75% main 0 0% 0% 400ms 89.89% CxxTest::RealTestDescription::run 0 0% 0% 400ms 89.89% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 400ms 89.89% CxxTest::TestRunner::runTest (inline) 0 0% 0% 400ms 89.89% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 400ms 89.89% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 396ms 88.99% AbstractCardiacProblem::Solve 0 0% 0% 396ms 88.99% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 350ms 78.65% LinearSystem::Solve 0 0% 0% 349ms 78.43% KSPSolve 0 0% 0% 349ms 78.43% KSPSolve_CG 1ms 0.22% 0.22% 349ms 78.43% KSPSolve_Private 0 0% 0.22% 207ms 46.52% KSP_PCApply.lto_priv.7 1ms 0.22% 0.45% 200ms 44.94% PCApply 0 0% 0.45% 200ms 44.94% PCApply_BJacobi_Singleblock 1ms 0.22% 0.67% 165ms 37.08% KSPSolve_PREONLY (partial-inline) 0 0% 0.67% 148ms 33.26% MatSolve 146ms 32.81% 33.48% 148ms 33.26% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 33.48% 148ms 33.26% PCApply_ICC 0 0% 33.48% 58ms 13.03% MatMult 2ms 0.45% 33.93% 58ms 13.03% MatMult_SeqAIJ (partial-inline) 56ms 12.58% 46.52% 58ms 13.03% MatMult_SeqAIJ_Inode (inline) 54ms 12.13% 58.65% 54ms 12.13% ddot_ 1ms 0.22% 58.88% 44ms 9.89% VecTDot 0 0% 58.88% 43ms 9.66% VecTDot_Seq 0 0% 58.88% 43ms 9.66% VecXDot_Seq_Private.constprop.0 0 0% 58.88% 42ms 9.44% AbstractCardiacTissue::SolveCellSystems 0 0% 58.88% 40ms 8.99% MatNullSpaceRemove 0 0% 58.88% 32ms 7.19% CxxTest::RealWorldDescription::setUp 0 0% 58.88% 32ms 7.19% PetscSetup::setUpWorld 0 0% 58.88% 32ms 7.19% PetscSetupUtils::CommonSetup 0 0% 58.88% 32ms 7.19% PetscSetupUtils::InitialisePetsc 0 0% 58.88% 31ms 6.97% PMPI_Init_thread 0 0% 58.88% 31ms 6.97% PetscInitialize 0 0% 58.88% 31ms 6.97% ompi_mpi_init 0 0% 58.88% 24ms 5.39% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.22% 59.10% 24ms 5.39% VecMDot 1ms 0.22% 59.33% 23ms 5.17% 1ms 0.22% 59.55% 23ms 5.17% VecMXDot_Private 22ms 4.94% 64.49% 22ms 4.94% VecMDot_Seq 0 0% 64.49% 21ms 4.72% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 64.49% 21ms 4.72% orte_init 2ms 0.45% 64.94% 19ms 4.27% EulerIvpOdeSolver::CalculateNextYValue 0 0% 64.94% 19ms 4.27% KSP_PCApply (partial-inline) 4ms 0.9% 65.84% 16ms 3.60% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1ms 0.22% 66.07% 16ms 3.60% VecMAXPY 1ms 0.22% 66.29% 15ms 3.37% KSP_RemoveNullSpace (inline) 15ms 3.37% 69.66% 15ms 3.37% VecMAXPY_Seq 6ms 1.35% 71.01% 14ms 3.15% __GI___exp 1ms 0.22% 71.24% 13ms 2.92% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 71.24% 13ms 2.92% VecAXPY 0 0% 71.24% 13ms 2.92% VecAXPY_Seq 0 0% 71.24% 13ms 2.92% VecAYPX 13ms 2.92% 74.16% 13ms 2.92% VecAYPX_Seq 0 0% 74.16% 13ms 2.92% __GI__dl_catch_exception 0 0% 74.16% 13ms 2.92% _dl_catch_error 0 0% 74.16% 13ms 2.92% _dlerror_run 13ms 2.92% 77.08% 13ms 2.92% daxpy_ 6ms 1.35% 78.43% 12ms 2.70% CellLuoRudy1991FromCellML::GetIIonic 0 0% 78.43% 12ms 2.70% hwloc_topology_load 0 0% 78.43% 12ms 2.70% opal_stackframe_output 0 0% 78.43% 11ms 2.47% VecNorm 0 0% 78.43% 11ms 2.47% VecNorm_Seq 1ms 0.22% 78.65% 11ms 2.47% _dl_lookup_symbol_x 0 0% 78.65% 11ms 2.47% hwloc_linux_get_tid_last_cpu_location 0 0% 78.65% 11ms 2.47% mca_base_framework_open 0 0% 78.65% 11ms 2.47% mca_base_framework_register 0 0% 78.65% 10ms 2.25% ___dlopen 0 0% 78.65% 10ms 2.25% _dl_open 0 0% 78.65% 10ms 2.25% dl_open_worker 0 0% 78.65% 10ms 2.25% dl_open_worker_begin 0 0% 78.65% 10ms 2.25% dlopen_doit 0 0% 78.65% 10ms 2.25% dlopen_implementation (inline) 10ms 2.25% 80.90% 10ms 2.25% do_lookup_x 0 0% 80.90% 10ms 2.25% mca_base_framework_components_register 0 0% 80.90% 9ms 2.02% mca_base_component_find 0 0% 80.90% 9ms 2.02% mca_base_component_repository_open 0 0% 80.90% 8ms 1.80% VecDuplicate 0 0% 80.90% 8ms 1.80% VecDuplicate_Seq 8ms 1.80% 82.70% 8ms 1.80% __ieee754_exp_fma 0 0% 82.70% 7ms 1.57% _dl_init 0 0% 82.70% 7ms 1.57% _dl_open_relocate_one_object (inline) 0 0% 82.70% 7ms 1.57% _dl_relocate_object 0 0% 82.70% 7ms 1.57% _dl_start_user 0 0% 82.70% 7ms 1.57% call_init (inline) 0 0% 82.70% 7ms 1.57% elf_dynamic_do_Rela (inline) 0 0% 82.70% 7ms 1.57% elf_machine_rela (inline) 0 0% 82.70% 7ms 1.57% resolve_map (inline) 1ms 0.22% 82.92% 6ms 1.35% _dl_runtime_resolve_xsavec 2ms 0.45% 83.37% 6ms 1.35% boost::serialization::singleton::get_instance 0 0% 83.37% 5ms 1.12% PetscMallocA 1ms 0.22% 83.60% 5ms 1.12% PetscMallocAlign (partial-inline) 0 0% 83.60% 5ms 1.12% VecSetType 1ms 0.22% 83.82% 5ms 1.12% _dl_fixup 0 0% 83.82% 4ms 0.9% AbstractCardiacProblem::Initialise 2ms 0.45% 84.27% 4ms 0.9% BidomainSolver::SetupLinearSystem 3ms 0.67% 84.94% 4ms 0.9% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.94% 4ms 0.9% PetscMemzero (inline) 0 0% 84.94% 4ms 0.9% VecCreate_Seq 2ms 0.45% 85.39% 4ms 0.9% __GI___libc_free 0 0% 85.39% 4ms 0.9% __ieee754_pow_fma 4ms 0.9% 86.29% 4ms 0.9% __memcpy_avx_unaligned_erms 4ms 0.9% 87.19% 4ms 0.9% __memset_avx2_unaligned_erms 0 0% 87.19% 4ms 0.9% __pow 0 0% 87.19% 4ms 0.9% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 87.19% 4ms 0.9% opal_hwloc_base_get_topology 0 0% 87.19% 4ms 0.9% orte_ess_base_proc_binding 0 0% 87.19% 4ms 0.9% std::pow (inline) 0 0% 87.19% 3ms 0.67% CxxTest::RealWorldDescription::tearDown 0 0% 87.19% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 87.19% 3ms 0.67% KSPConvergedDefault 2ms 0.45% 87.64% 3ms 0.67% KSPConvergedReasonViewFromOptions 0 0% 87.64% 3ms 0.67% PetscFinalize 0 0% 87.64% 3ms 0.67% PetscMemcpy (inline) 0 0% 87.64% 3ms 0.67% PetscSetup::tearDownWorld 0 0% 87.64% 3ms 0.67% PetscSetupUtils::CommonFinalize 0 0% 87.64% 3ms 0.67% VecCreate 0 0% 87.64% 3ms 0.67% VecDestroy 0 0% 87.64% 3ms 0.67% XOpenDisplay 0 0% 87.64% 3ms 0.67% [hwloc_gl.so] 0 0% 87.64% 3ms 0.67% _XConnectXCB 1ms 0.22% 87.87% 3ms 0.67% __GI___libc_malloc 3ms 0.67% 88.54% 3ms 0.67% __GI___libc_read 0 0% 88.54% 3ms 0.67% __GI_exit 1ms 0.22% 88.76% 3ms 0.67% __cxa_finalize 0 0% 88.76% 3ms 0.67% __dlclose 0 0% 88.76% 3ms 0.67% __run_exit_handlers 0 0% 88.76% 3ms 0.67% _dl_call_fini 0 0% 88.76% 3ms 0.67% _dl_close 1ms 0.22% 88.99% 3ms 0.67% _dl_close_worker (inline) 0 0% 88.99% 3ms 0.67% _dl_fini 0 0% 88.99% 3ms 0.67% _dl_map_object 0 0% 88.99% 3ms 0.67% _dl_map_object_from_fd 0 0% 88.99% 3ms 0.67% _dl_map_segments (inline) 0 0% 88.99% 3ms 0.67% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 88.99% 3ms 0.67% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.67% 89.66% 3ms 0.67% log_inline (inline) 0 0% 89.66% 3ms 0.67% mca_base_component_repository_release 0 0% 89.66% 3ms 0.67% mca_base_var_group_register 0 0% 89.66% 3ms 0.67% mca_base_var_register 0 0% 89.66% 3ms 0.67% ompi_mpi_finalize