File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108812ms, 91.69% of 118678ms total Dropped 1130 nodes (cum <= 593.39ms) flat flat% sum% cum cum% 0 0% 0% 118664ms 100% __libc_start_call_main 0 0% 0% 118664ms 100% __libc_start_main_impl 0 0% 0% 118664ms 100% _start 0 0% 0% 118661ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118661ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118661ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118661ms 100% main 0 0% 0% 118625ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118625ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118625ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118625ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118625ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 118624ms 100% AbstractConvergenceTester::Converge 6ms 0.0051% 0.0051% 117369ms 98.90% AbstractCardiacProblem::Solve 6ms 0.0051% 0.01% 116601ms 98.25% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0051% 0.015% 65187ms 54.93% LinearSystem::Solve 3ms 0.0025% 0.018% 64711ms 54.53% KSPSolve 15ms 0.013% 0.03% 64708ms 54.52% KSPSolve_Private 12ms 0.01% 0.04% 64317ms 54.19% KSPSolve_SYMMLQ 187ms 0.16% 0.2% 42583ms 35.88% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.2% 36447ms 30.71% PCApply 1ms 0.00084% 0.2% 36440ms 30.70% PCApply_BJacobi_Singleblock 0 0% 0.2% 33938ms 28.60% KSPSolve_PREONLY (partial-inline) 1ms 0.00084% 0.2% 32752ms 27.60% PCApply_ICC 3ms 0.0025% 0.2% 32751ms 27.60% MatSolve 32274ms 27.19% 27.40% 32748ms 27.59% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1352ms 1.14% 28.54% 32718ms 27.57% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 28.54% 31501ms 26.54% KSP_PCApply.lto_priv.18 6970ms 5.87% 34.41% 28382ms 23.92% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0076% 34.42% 22091ms 18.61% MatMult 7ms 0.0059% 34.43% 22082ms 18.61% MatMult_SeqAIJ 21590ms 18.19% 52.62% 22081ms 18.61% MatMult_SeqAIJ_Inode (inline) 1900ms 1.60% 54.22% 14665ms 12.36% CardiacNewtonSolver::Solve 282ms 0.24% 54.46% 9067ms 7.64% AbstractCardiacTissue::UpdateCaches (inline) 4430ms 3.73% 58.19% 8638ms 7.28% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1946ms 1.64% 59.83% 8592ms 7.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1099ms 0.93% 60.76% 7738ms 6.52% BidomainSolver::SetupLinearSystem 1056ms 0.89% 61.64% 7259ms 6.12% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0017% 61.65% 7089ms 5.97% KSP_PCApply (partial-inline) 4ms 0.0034% 61.65% 6445ms 5.43% KSPConvergedDefault 5951ms 5.01% 66.66% 5951ms 5.01% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3902ms 3.29% 69.95% 3941ms 3.32% __ieee754_log_fma 0 0% 69.95% 3728ms 3.14% boost::numeric::ublas::norm_inf (inline) 2491ms 2.10% 72.05% 3728ms 3.14% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.05% 3728ms 3.14% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.05% 3728ms 3.14% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 72.06% 3484ms 2.94% MatNullSpaceRemove 25ms 0.021% 72.08% 3334ms 2.81% std::pow (inline) 398ms 0.34% 72.41% 3307ms 2.79% __pow 3089ms 2.60% 75.01% 3089ms 2.60% __memcpy_avx_unaligned_erms 0 0% 75.01% 3051ms 2.57% PetscMemcpy (inline) 400ms 0.34% 75.35% 2902ms 2.45% __ieee754_pow_fma 1681ms 1.42% 76.77% 2835ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2692ms 2.27% 79.04% 2692ms 2.27% ddot_ 7ms 0.0059% 79.04% 2600ms 2.19% VecCopy 4ms 0.0034% 79.05% 2590ms 2.18% VecCopy_Seq (partial-inline) 9ms 0.0076% 79.05% 2401ms 2.02% VecAXPY 5ms 0.0042% 79.06% 2392ms 2.02% VecAXPY_Seq 2377ms 2.00% 81.06% 2377ms 2.00% daxpy_ 1ms 0.00084% 81.06% 2172ms 1.83% VecDot 1ms 0.00084% 81.06% 2171ms 1.83% VecDot_Seq 1ms 0.00084% 81.06% 2170ms 1.83% VecXDot_Seq_Private.constprop.0 6ms 0.0051% 81.07% 2090ms 1.76% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.07% 2006ms 1.69% VecMDot 12ms 0.01% 81.08% 2006ms 1.69% VecMXDot_Private 1987ms 1.67% 82.75% 1989ms 1.68% VecMDot_Seq 27ms 0.023% 82.78% 1744ms 1.47% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1634ms 1.38% 84.15% 1705ms 1.44% exp_inline (inline) 1481ms 1.25% 85.40% 1481ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 3ms 0.0025% 85.40% 1473ms 1.24% VecMAXPY 1463ms 1.23% 86.64% 1470ms 1.24% VecMAXPY_Seq 0 0% 86.64% 1440ms 1.21% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.64% 1158ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.64% 1158ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.64% 1158ms 0.98% boost_numeric_ublas_abs (inline) 1158ms 0.98% 87.61% 1158ms 0.98% std::abs (inline) 6ms 0.0051% 87.62% 1148ms 0.97% boost::numeric::ublas::matrix_assign (inline) 235ms 0.2% 87.81% 1137ms 0.96% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.81% 1107ms 0.93% CuboidMeshConstructor::Construct 0 0% 87.81% 1106ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.81% 1106ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 1098ms 0.93% 88.74% 1098ms 0.93% __memset_avx2_unaligned_erms 0 0% 88.74% 1087ms 0.92% PetscMemzero (inline) 798ms 0.67% 89.41% 1059ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00084% 89.41% 999ms 0.84% Element::Element 2ms 0.0017% 89.41% 998ms 0.84% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0025% 89.42% 953ms 0.8% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0017% 89.42% 909ms 0.77% VecDuplicate 3ms 0.0025% 89.42% 903ms 0.76% BidomainAssembler::ComputeMatrixTerm 7ms 0.0059% 89.43% 863ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 848ms 0.71% 90.14% 848ms 0.71% [libchaste_heart.so] 9ms 0.0076% 90.15% 819ms 0.69% VecScale 4ms 0.0034% 90.15% 810ms 0.68% VecScale_Seq 803ms 0.68% 90.83% 803ms 0.68% dscal_ 5ms 0.0042% 90.83% 766ms 0.65% VecNorm 0 0% 90.83% 761ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 253ms 0.21% 91.05% 760ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0059% 91.05% 760ms 0.64% PetscMallocA 3ms 0.0025% 91.05% 757ms 0.64% VecNorm_Seq 7ms 0.0059% 91.06% 753ms 0.63% PetscMallocAlign (partial-inline) 743ms 0.63% 91.69% 743ms 0.63% log_inline (inline) 0 0% 91.69% 696ms 0.59% BidomainProblem::WriteOneStep 0 0% 91.69% 650ms 0.55% AbstractFeAssemblerInterface::Assemble (inline) 0 0% 91.69% 605ms 0.51% boost::numeric::ublas::matrix_slice::operator= (inline)