File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12896ms, 86.58% of 14895ms total Dropped 716 nodes (cum <= 74.47ms) flat flat% sum% cum cum% 0 0% 0% 14886ms 99.94% __libc_start_call_main 0 0% 0% 14886ms 99.94% __libc_start_main_impl 0 0% 0% 14886ms 99.94% _start 0 0% 0% 14883ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14883ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14883ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14883ms 99.92% main 0 0% 0% 14848ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14848ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14848ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 7ms 0.047% 0.047% 14826ms 99.54% AbstractCardiacProblem::Solve 6ms 0.04% 0.087% 11435ms 76.77% AbstractDynamicLinearPdeSolver::Solve 47ms 0.32% 0.4% 9221ms 61.91% AbstractCardiacTissue::SolveCellSystems 135ms 0.91% 1.31% 5686ms 38.17% AbstractCardiacCell::ComputeExceptVoltage 173ms 1.16% 2.47% 4911ms 32.97% AbstractOneStepIvpOdeSolver::InternalSolve 199ms 1.34% 3.81% 4188ms 28.12% EulerIvpOdeSolver::CalculateNextYValue 890ms 5.98% 9.78% 3935ms 26.42% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1747ms 11.73% 21.51% 3641ms 24.44% __GI___exp 3ms 0.02% 21.53% 3327ms 22.34% MonodomainProblem::WriteOneStep 6ms 0.04% 21.57% 3208ms 21.54% Hdf5DataWriter::PutVector 1ms 0.0067% 21.58% 3155ms 21.18% H5Dwrite 3ms 0.02% 21.60% 3120ms 20.95% H5D__write 101ms 0.68% 22.28% 2702ms 18.14% AbstractCardiacTissue::UpdateCaches (inline) 864ms 5.80% 28.08% 2555ms 17.15% CellLuoRudy1991FromCellML::GetIIonic 1696ms 11.39% 39.46% 1821ms 12.23% __ieee754_exp_fma 1ms 0.0067% 39.47% 1774ms 11.91% H5D__chunk_collective_write 30ms 0.2% 39.67% 1773ms 11.90% H5F_set_coll_metadata_reads 17ms 0.11% 39.79% 1550ms 10.41% H5FD_s3comms_uriencode 2ms 0.013% 39.80% 1487ms 9.98% LinearSystem::Solve 0 0% 39.80% 1366ms 9.17% KSPSolve 2ms 0.013% 39.81% 1366ms 9.17% KSPSolve_Private 3ms 0.02% 39.83% 1357ms 9.11% KSPSolve_CG 5ms 0.034% 39.87% 1254ms 8.42% H5D__chunk_cacheable 3ms 0.02% 39.89% 1185ms 7.96% H5F_block_write 2ms 0.013% 39.90% 1182ms 7.94% H5PB_write 1ms 0.0067% 39.91% 1180ms 7.92% H5F__accum_write 2ms 0.013% 39.92% 1179ms 7.92% H5FD_write 51ms 0.34% 40.26% 1177ms 7.90% 1ms 0.0067% 40.27% 1099ms 7.38% H5D__mpio_select_write 250ms 1.68% 41.95% 1096ms 7.36% H5S_select_iterate 0 0% 41.95% 1003ms 6.73% PMPI_File_write_at_all 975ms 6.55% 48.49% 977ms 6.56% __GI_pwritev64 8ms 0.054% 48.55% 889ms 5.97% std::pow (inline) 87ms 0.58% 49.13% 880ms 5.91% __pow 89ms 0.6% 49.73% 860ms 5.77% H5D__chunk_set_sizes 91ms 0.61% 50.34% 791ms 5.31% __ieee754_pow_fma 0 0% 50.34% 700ms 4.70% PCApply 282ms 1.89% 52.23% 696ms 4.67% MonodomainSolver::SetupLinearSystem 0 0% 52.23% 694ms 4.66% PCApply_BJacobi_Singleblock 0 0% 52.23% 667ms 4.48% KSPSolve_PREONLY 1ms 0.0067% 52.24% 662ms 4.44% MatSolve 0 0% 52.24% 662ms 4.44% PCApply_ICC 319ms 2.14% 54.38% 661ms 4.44% CellLuoRudy1991FromCellML::VerifyStateVariables 653ms 4.38% 58.76% 661ms 4.44% MatSolve_SeqSBAIJ_1_NaturalOrdering 5ms 0.034% 58.80% 654ms 4.39% MatMult 648ms 4.35% 63.15% 649ms 4.36% MatMult_SeqAIJ 1ms 0.0067% 63.16% 495ms 3.32% KSP_PCApply.lto_priv.7 55ms 0.37% 63.52% 453ms 3.04% H5S_mpio_space_type 391ms 2.63% 66.15% 391ms 2.63% log_inline (inline) 20ms 0.13% 66.28% 292ms 1.96% H5S_select_iter_next 278ms 1.87% 68.15% 278ms 1.87% H5PL_load 277ms 1.86% 70.01% 277ms 1.86% exp_inline (inline) 0 0% 70.01% 262ms 1.76% KSPConvergedDefault 148ms 0.99% 71.00% 259ms 1.74% TimeStepper::TimeStepper 0 0% 71.00% 207ms 1.39% KSP_PCApply 161ms 1.08% 72.08% 205ms 1.38% _int_malloc 21ms 0.14% 72.23% 202ms 1.36% H5VM_chunk_index 34ms 0.23% 72.45% 198ms 1.33% __GI___libc_malloc 178ms 1.20% 73.65% 178ms 1.20% std::isinf (inline) 90ms 0.6% 74.25% 171ms 1.15% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 10ms 0.067% 74.32% 169ms 1.13% ompi_datatype_create 39ms 0.26% 74.58% 158ms 1.06% AbstractCardiacCell::SetVoltage (partial-inline) 96ms 0.64% 75.23% 155ms 1.04% top12 (inline) 135ms 0.91% 76.13% 153ms 1.03% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 123ms 0.83% 76.96% 152ms 1.02% AbstractOneStepIvpOdeSolver::Solve 5ms 0.034% 76.99% 149ms 1.00% MPI_Type_free 7ms 0.047% 77.04% 149ms 1.00% ompi_datatype_destroy 147ms 0.99% 78.03% 147ms 0.99% [libchaste_heart.so] 21ms 0.14% 78.17% 141ms 0.95% __GI___libc_free 20ms 0.13% 78.30% 138ms 0.93% H5S_set_version 42ms 0.28% 78.58% 132ms 0.89% ompi_datatype_release_args 8ms 0.054% 78.64% 132ms 0.89% ompi_info_register_framework_params 122ms 0.82% 79.46% 122ms 0.82% ddot_ 49ms 0.33% 79.79% 119ms 0.8% _int_free 45ms 0.3% 80.09% 118ms 0.79% H5VM_array_calc 2ms 0.013% 80.10% 118ms 0.79% PMPI_Type_create_resized 1ms 0.0067% 80.11% 116ms 0.78% Hdf5DataWriter::PutUnlimitedVariable 116ms 0.78% 80.89% 116ms 0.78% TimeStepper::CalculateNextTime 2ms 0.013% 80.90% 113ms 0.76% ompi_datatype_duplicate 2ms 0.013% 80.91% 105ms 0.7% PMPI_File_set_view 0 0% 80.91% 105ms 0.7% VecDuplicate 13ms 0.087% 81.00% 105ms 0.7% VecDuplicate_MPI 100ms 0.67% 81.67% 100ms 0.67% __memcpy_avx_unaligned_erms 39ms 0.26% 81.93% 100ms 0.67% std::__cxx11::basic_string::basic_string 50ms 0.34% 82.27% 99ms 0.66% H5S_hyper_add_span_element 49ms 0.33% 82.60% 97ms 0.65% AbstractCardiacCell::GetVoltage (partial-inline) 85ms 0.57% 83.17% 97ms 0.65% AbstractParameterisedSystem::SetAnyVariable 94ms 0.63% 83.80% 94ms 0.63% __ieee754_log_fma 92ms 0.62% 84.42% 92ms 0.62% H5VM_array_offset_pre 91ms 0.61% 85.03% 91ms 0.61% H5VM_chunk_index_scaled 71ms 0.48% 85.51% 88ms 0.59% AbstractParameterisedSystem::GetAnyVariable 20ms 0.13% 85.64% 85ms 0.57% __libc_calloc 1ms 0.0067% 85.65% 83ms 0.56% VecNorm 56ms 0.38% 86.02% 82ms 0.55% TimeStepper::AdvanceOneTimeStep 1ms 0.0067% 86.03% 78ms 0.52% VecTDot 3ms 0.02% 86.05% 78ms 0.52% opal_datatype_create_desc 4ms 0.027% 86.08% 77ms 0.52% MPI_Type_contiguous 0 0% 86.08% 75ms 0.5% VecTDot_Seq 0 0% 86.08% 75ms 0.5% VecXDot_Seq_Private.constprop.0 75ms 0.5% 86.58% 75ms 0.5% [libm.so.6]