File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111043ms, 91.92% of 120808ms total Dropped 1138 nodes (cum <= 604.04ms) flat flat% sum% cum cum% 0 0% 0% 120796ms 100% __libc_start_call_main 0 0% 0% 120796ms 100% __libc_start_main_impl 0 0% 0% 120796ms 100% _start 0 0% 0% 120793ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120793ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120793ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120793ms 100% main 0 0% 0% 120757ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120757ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120757ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120757ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120757ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120757ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0025% 0.0025% 119481ms 98.90% AbstractCardiacProblem::Solve 11ms 0.0091% 0.012% 118696ms 98.25% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0017% 0.013% 66973ms 55.44% LinearSystem::Solve 2ms 0.0017% 0.015% 66482ms 55.03% KSPSolve 10ms 0.0083% 0.023% 66480ms 55.03% KSPSolve_Private 6ms 0.005% 0.028% 66040ms 54.67% KSPSolve_SYMMLQ 201ms 0.17% 0.19% 42741ms 35.38% AbstractCardiacTissue::SolveCellSystems 1ms 0.00083% 0.2% 36852ms 30.50% PCApply 6ms 0.005% 0.2% 36838ms 30.49% PCApply_BJacobi_Singleblock 0 0% 0.2% 34156ms 28.27% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.2% 33060ms 27.37% PCApply_ICC 5ms 0.0041% 0.21% 33058ms 27.36% MatSolve 32536ms 26.93% 27.14% 33053ms 27.36% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1447ms 1.20% 28.34% 32946ms 27.27% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0033% 28.34% 31783ms 26.31% KSP_PCApply.lto_priv.18 6798ms 5.63% 33.97% 28364ms 23.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.005% 33.97% 23096ms 19.12% MatMult 218ms 0.18% 34.15% 23090ms 19.11% MatMult_SeqAIJ (partial-inline) 22590ms 18.70% 52.85% 23090ms 19.11% MatMult_SeqAIJ_Inode (inline) 2008ms 1.66% 54.51% 14799ms 12.25% CardiacNewtonSolver::Solve 439ms 0.36% 54.88% 8953ms 7.41% AbstractCardiacTissue::UpdateCaches (inline) 4299ms 3.56% 58.43% 8595ms 7.11% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1997ms 1.65% 60.09% 8329ms 6.89% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1115ms 0.92% 61.01% 7975ms 6.60% BidomainSolver::SetupLinearSystem 1348ms 1.12% 62.13% 7536ms 6.24% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00083% 62.13% 7035ms 5.82% KSP_PCApply (partial-inline) 7ms 0.0058% 62.13% 6451ms 5.34% KSPConvergedDefault 5926ms 4.91% 67.04% 5926ms 4.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3968ms 3.28% 70.32% 4002ms 3.31% __ieee754_log_fma 0 0% 70.32% 3795ms 3.14% boost::numeric::ublas::norm_inf (inline) 2617ms 2.17% 72.49% 3795ms 3.14% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.49% 3795ms 3.14% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.49% 3795ms 3.14% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3391ms 2.81% 75.30% 3391ms 2.81% __memcpy_avx_unaligned_erms 0 0% 75.30% 3361ms 2.78% PetscMemcpy (inline) 16ms 0.013% 75.31% 3335ms 2.76% MatNullSpaceRemove 24ms 0.02% 75.33% 3196ms 2.65% std::pow (inline) 372ms 0.31% 75.64% 3151ms 2.61% __pow 2952ms 2.44% 78.08% 2952ms 2.44% ddot_ 1741ms 1.44% 79.52% 2947ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 17ms 0.014% 79.54% 2882ms 2.39% VecCopy 2ms 0.0017% 79.54% 2862ms 2.37% VecCopy_Seq (partial-inline) 393ms 0.33% 79.86% 2767ms 2.29% __ieee754_pow_fma 21ms 0.017% 79.88% 2558ms 2.12% VecAXPY 4ms 0.0033% 79.88% 2537ms 2.10% VecAXPY_Seq 2522ms 2.09% 81.97% 2522ms 2.09% daxpy_ 8ms 0.0066% 81.98% 2443ms 2.02% VecDot 0 0% 81.98% 2435ms 2.02% VecDot_Seq 4ms 0.0033% 81.98% 2435ms 2.02% VecXDot_Seq_Private.constprop.0 2ms 0.0017% 81.98% 2062ms 1.71% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.98% 1822ms 1.51% VecMDot 9ms 0.0074% 81.99% 1822ms 1.51% VecMXDot_Private 1805ms 1.49% 83.48% 1810ms 1.50% VecMDot_Seq 37ms 0.031% 83.52% 1730ms 1.43% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1562ms 1.29% 84.81% 1625ms 1.35% exp_inline (inline) 5ms 0.0041% 84.81% 1497ms 1.24% VecMAXPY 1488ms 1.23% 86.04% 1492ms 1.24% VecMAXPY_Seq 0 0% 86.04% 1414ms 1.17% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1195ms 0.99% 87.03% 1195ms 0.99% __memset_avx2_unaligned_erms 0 0% 87.03% 1184ms 0.98% PetscMemzero (inline) 4ms 0.0033% 87.04% 1157ms 0.96% boost::numeric::ublas::matrix_assign (inline) 202ms 0.17% 87.20% 1149ms 0.95% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.20% 1118ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.20% 1118ms 0.93% CuboidMeshConstructor::Construct 1ms 0.00083% 87.20% 1118ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 0 0% 87.20% 1085ms 0.9% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.20% 1085ms 0.9% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.20% 1085ms 0.9% boost_numeric_ublas_abs (inline) 1085ms 0.9% 88.10% 1085ms 0.9% std::abs (inline) 812ms 0.67% 88.77% 1064ms 0.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1045ms 0.87% 89.64% 1045ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 2ms 0.0017% 89.64% 993ms 0.82% Element::Element 3ms 0.0025% 89.64% 986ms 0.82% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0025% 89.65% 979ms 0.81% VecDuplicate 3ms 0.0025% 89.65% 928ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 7ms 0.0058% 89.65% 913ms 0.76% BidomainAssembler::ComputeMatrixTerm 884ms 0.73% 90.39% 884ms 0.73% [libchaste_heart.so] 6ms 0.005% 90.39% 876ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 6ms 0.005% 90.40% 869ms 0.72% VecScale 3ms 0.0025% 90.40% 863ms 0.71% VecScale_Seq 858ms 0.71% 91.11% 858ms 0.71% dscal_ 11ms 0.0091% 91.12% 837ms 0.69% PetscMallocA 8ms 0.0066% 91.12% 826ms 0.68% PetscMallocAlign (partial-inline) 3ms 0.0025% 91.13% 797ms 0.66% VecNorm 1ms 0.00083% 91.13% 785ms 0.65% VecNorm_Seq 2ms 0.0017% 91.13% 725ms 0.6% BidomainProblem::WriteOneStep 708ms 0.59% 91.72% 708ms 0.59% log_inline (inline) 0 0% 91.72% 691ms 0.57% AbstractBidomainSolver::FinaliseLinearSystem 241ms 0.2% 91.92% 687ms 0.57% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.92% 648ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 2ms 0.0017% 91.92% 615ms 0.51% VecDuplicate_Seq 0 0% 91.92% 613ms 0.51% boost::numeric::ublas::matrix_slice::operator= (inline)