File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12629ms, 86.19% of 14653ms total Dropped 730 nodes (cum <= 73.27ms) flat flat% sum% cum cum% 0 0% 0% 14646ms 100% __libc_start_call_main 0 0% 0% 14646ms 100% __libc_start_main_impl 0 0% 0% 14646ms 100% _start 0 0% 0% 14644ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14644ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14644ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14644ms 99.94% main 0 0% 0% 14607ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14607ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14607ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14586ms 99.54% AbstractCardiacProblem::Solve 1ms 0.0068% 0.027% 11296ms 77.09% AbstractDynamicLinearPdeSolver::Solve 46ms 0.31% 0.34% 8983ms 61.30% AbstractCardiacTissue::SolveCellSystems 113ms 0.77% 1.11% 5460ms 37.26% AbstractCardiacCell::ComputeExceptVoltage 88ms 0.6% 1.71% 4739ms 32.34% AbstractOneStepIvpOdeSolver::InternalSolve 139ms 0.95% 2.66% 4140ms 28.25% EulerIvpOdeSolver::CalculateNextYValue 905ms 6.18% 8.84% 3958ms 27.01% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1722ms 11.75% 20.59% 3630ms 24.77% __GI___exp 1ms 0.0068% 20.60% 3219ms 21.97% MonodomainProblem::WriteOneStep 2ms 0.014% 20.61% 3063ms 20.90% H5Dwrite 0 0% 20.61% 3054ms 20.84% Hdf5DataWriter::PutVector 4ms 0.027% 20.64% 3036ms 20.72% H5D__write 106ms 0.72% 21.36% 2592ms 17.69% AbstractCardiacTissue::UpdateCaches (inline) 762ms 5.20% 26.56% 2444ms 16.68% CellLuoRudy1991FromCellML::GetIIonic 1670ms 11.40% 37.96% 1830ms 12.49% __ieee754_exp_fma 2ms 0.014% 37.97% 1713ms 11.69% H5D__chunk_collective_write 13ms 0.089% 38.06% 1711ms 11.68% H5F_set_coll_metadata_reads 4ms 0.027% 38.09% 1521ms 10.38% LinearSystem::Solve 10ms 0.068% 38.16% 1496ms 10.21% H5FD_s3comms_uriencode 2ms 0.014% 38.17% 1420ms 9.69% KSPSolve 3ms 0.02% 38.19% 1420ms 9.69% KSPSolve_Private 2ms 0.014% 38.20% 1411ms 9.63% KSPSolve_CG 3ms 0.02% 38.22% 1212ms 8.27% H5F_block_write 6ms 0.041% 38.27% 1209ms 8.25% H5PB_write 1ms 0.0068% 38.27% 1203ms 8.21% H5FD_write 0 0% 38.27% 1203ms 8.21% H5F__accum_write 51ms 0.35% 38.62% 1201ms 8.20% 10ms 0.068% 38.69% 1193ms 8.14% H5D__chunk_cacheable 1ms 0.0068% 38.70% 1116ms 7.62% H5D__mpio_select_write 385ms 2.63% 41.32% 1006ms 6.87% H5S_select_iterate 0 0% 41.32% 1006ms 6.87% PMPI_File_write_at_all 981ms 6.69% 48.02% 982ms 6.70% __GI_pwritev64 7ms 0.048% 48.07% 882ms 6.02% std::pow (inline) 77ms 0.53% 48.59% 875ms 5.97% __pow 105ms 0.72% 49.31% 796ms 5.43% __ieee754_pow_fma 4ms 0.027% 49.33% 791ms 5.40% PCApply 0 0% 49.33% 788ms 5.38% PCApply_BJacobi_Singleblock 384ms 2.62% 51.96% 769ms 5.25% MonodomainSolver::SetupLinearSystem 0 0% 51.96% 748ms 5.10% KSPSolve_PREONLY 322ms 2.20% 54.15% 746ms 5.09% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 54.17% 739ms 5.04% MatSolve 0 0% 54.17% 739ms 5.04% PCApply_ICC 730ms 4.98% 59.16% 736ms 5.02% MatSolve_SeqSBAIJ_1_NaturalOrdering 63ms 0.43% 59.59% 640ms 4.37% H5D__chunk_set_sizes 5ms 0.034% 59.62% 489ms 3.34% MatMult 482ms 3.29% 62.91% 484ms 3.30% MatMult_SeqAIJ 1ms 0.0068% 62.92% 481ms 3.28% KSP_PCApply.lto_priv.7 4ms 0.027% 62.94% 406ms 2.77% KSPConvergedDefault 59ms 0.4% 63.35% 395ms 2.70% H5S_mpio_space_type 385ms 2.63% 65.97% 385ms 2.63% log_inline (inline) 2ms 0.014% 65.99% 313ms 2.14% KSP_PCApply 289ms 1.97% 67.96% 291ms 1.99% exp_inline (inline) 134ms 0.91% 68.87% 263ms 1.79% TimeStepper::TimeStepper 201ms 1.37% 70.25% 201ms 1.37% ddot_ 18ms 0.12% 70.37% 198ms 1.35% H5VM_chunk_index 51ms 0.35% 70.72% 191ms 1.30% std::__cxx11::basic_string::basic_string 34ms 0.23% 70.95% 190ms 1.30% __GI___libc_free 9ms 0.061% 71.01% 186ms 1.27% ompi_datatype_destroy 95ms 0.65% 71.66% 183ms 1.25% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 3ms 0.02% 71.68% 183ms 1.25% MPI_Type_free 50ms 0.34% 72.02% 179ms 1.22% __GI___libc_malloc 176ms 1.20% 73.22% 176ms 1.20% [libchaste_heart.so] 94ms 0.64% 73.86% 174ms 1.19% top12 (inline) 166ms 1.13% 74.99% 166ms 1.13% std::isinf (inline) 44ms 0.3% 75.30% 165ms 1.13% ompi_datatype_release_args 8ms 0.055% 75.35% 165ms 1.13% ompi_info_register_framework_params 144ms 0.98% 76.33% 164ms 1.12% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 76.33% 164ms 1.12% Hdf5DataWriter::PutUnlimitedVariable 124ms 0.85% 77.18% 157ms 1.07% AbstractOneStepIvpOdeSolver::Solve 51ms 0.35% 77.53% 156ms 1.06% _int_free 113ms 0.77% 78.30% 147ms 1.00% _int_malloc 19ms 0.13% 78.43% 142ms 0.97% H5S_set_version 141ms 0.96% 79.39% 141ms 0.96% TimeStepper::CalculateNextTime 51ms 0.35% 79.74% 123ms 0.84% H5VM_array_calc 2ms 0.014% 79.75% 121ms 0.83% VecNorm 9ms 0.061% 79.81% 120ms 0.82% ompi_datatype_create 0 0% 79.81% 118ms 0.81% VecTDot 7ms 0.048% 79.86% 118ms 0.81% std::char_traits::length (inline) 0 0% 79.86% 117ms 0.8% VecTDot_Seq 1ms 0.0068% 79.87% 117ms 0.8% VecXDot_Seq_Private.constprop.0 4ms 0.027% 79.89% 112ms 0.76% PMPI_File_set_view 50ms 0.34% 80.24% 111ms 0.76% H5S_hyper_add_span_element 111ms 0.76% 80.99% 111ms 0.76% __strlen_avx2 5ms 0.034% 81.03% 106ms 0.72% VecNorm_Seq 41ms 0.28% 81.31% 105ms 0.72% AbstractCardiacCell::SetVoltage (partial-inline) 55ms 0.38% 81.68% 98ms 0.67% AbstractCardiacCell::GetVoltage (partial-inline) 97ms 0.66% 82.34% 97ms 0.66% H5VM_chunk_index_scaled 1ms 0.0068% 82.35% 95ms 0.65% VecDuplicate 0 0% 82.35% 94ms 0.64% VecDuplicate_MPI 93ms 0.63% 82.99% 93ms 0.63% __ieee754_log_fma 1ms 0.0068% 82.99% 90ms 0.61% PMPI_Type_create_resized 90ms 0.61% 83.61% 90ms 0.61% __memcpy_avx_unaligned_erms 64ms 0.44% 84.04% 87ms 0.59% AbstractParameterisedSystem::GetAnyVariable 86ms 0.59% 84.63% 86ms 0.59% H5VM_array_offset_pre 0 0% 84.63% 84ms 0.57% ompi_datatype_duplicate 83ms 0.57% 85.20% 83ms 0.57% asuint64 (inline) 3ms 0.02% 85.22% 80ms 0.55% H5D__chunk_allocated 80ms 0.55% 85.76% 80ms 0.55% [libm.so.6] 1ms 0.0068% 85.77% 76ms 0.52% H5D__select_write 3ms 0.02% 85.79% 75ms 0.51% H5Dgather 17ms 0.12% 85.91% 75ms 0.51% H5S__hyper_rebuild 41ms 0.28% 86.19% 74ms 0.51% TimeStepper::AdvanceOneTimeStep