File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117699ms, 90.93% of 129446ms total Dropped 1151 nodes (cum <= 647.23ms) flat flat% sum% cum cum% 0 0% 0% 129424ms 100% __libc_start_call_main 0 0% 0% 129424ms 100% __libc_start_main_impl 0 0% 0% 129424ms 100% _start 0 0% 0% 129421ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 129421ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 129421ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 129421ms 100% main 0 0% 0% 129382ms 100% AbstractConvergenceTester::Converge 0 0% 0% 129382ms 100% CxxTest::RealTestDescription::run 0 0% 0% 129382ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 129382ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 129382ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 129382ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0023% 0.0023% 128174ms 99.02% AbstractCardiacProblem::Solve 9ms 0.007% 0.0093% 127322ms 98.36% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0046% 0.014% 71541ms 55.27% LinearSystem::Solve 3ms 0.0023% 0.016% 70929ms 54.79% KSPSolve 13ms 0.01% 0.026% 70927ms 54.79% KSPSolve_Private 8ms 0.0062% 0.032% 70556ms 54.51% KSPSolve_SYMMLQ 200ms 0.15% 0.19% 46293ms 35.76% AbstractCardiacTissue::SolveCellSystems 4ms 0.0031% 0.19% 39903ms 30.83% PCApply 4ms 0.0031% 0.19% 39888ms 30.81% PCApply_BJacobi_Singleblock 0 0% 0.19% 37421ms 28.91% KSPSolve_PREONLY (partial-inline) 799ms 0.62% 0.81% 36765ms 28.40% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00077% 0.81% 36285ms 28.03% PCApply_ICC 5ms 0.0039% 0.82% 36284ms 28.03% MatSolve 35884ms 27.72% 28.54% 36279ms 28.03% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0031% 28.54% 34157ms 26.39% KSP_PCApply.lto_priv.18 7049ms 5.45% 33.98% 32574ms 25.16% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.007% 33.99% 25050ms 19.35% MatMult 230ms 0.18% 34.17% 25041ms 19.34% MatMult_SeqAIJ (partial-inline) 24518ms 18.94% 53.11% 25039ms 19.34% MatMult_SeqAIJ_Inode (inline) 2015ms 1.56% 54.67% 14369ms 11.10% CardiacNewtonSolver::Solve 1608ms 1.24% 55.91% 14172ms 10.95% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 12263ms 9.47% 65.38% 12263ms 9.47% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 4242ms 3.28% 68.66% 8968ms 6.93% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 150ms 0.12% 68.78% 8636ms 6.67% AbstractCardiacTissue::UpdateCaches (inline) 1241ms 0.96% 69.73% 8327ms 6.43% BidomainSolver::SetupLinearSystem 1696ms 1.31% 71.04% 8265ms 6.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 0 0% 71.04% 7548ms 5.83% KSP_PCApply (partial-inline) 2ms 0.0015% 71.05% 7050ms 5.45% KSPConvergedDefault 4436ms 3.43% 74.47% 4538ms 3.51% __ieee754_log_fma 3389ms 2.62% 77.09% 3389ms 2.62% ddot_ 10ms 0.0077% 77.10% 3297ms 2.55% MatNullSpaceRemove 2068ms 1.60% 78.70% 3196ms 2.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 0 0% 78.70% 2966ms 2.29% boost::numeric::ublas::norm_inf (inline) 1778ms 1.37% 80.07% 2966ms 2.29% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 80.07% 2966ms 2.29% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 80.07% 2966ms 2.29% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2891ms 2.23% 82.30% 2891ms 2.23% __memcpy_avx_unaligned_erms 0 0% 82.30% 2859ms 2.21% PetscMemcpy (inline) 5ms 0.0039% 82.31% 2776ms 2.14% VecDot 0 0% 82.31% 2771ms 2.14% VecDot_Seq 3ms 0.0023% 82.31% 2771ms 2.14% VecXDot_Seq_Private.constprop.0 17ms 0.013% 82.32% 2493ms 1.93% VecCopy 0 0% 82.32% 2475ms 1.91% VecCopy_Seq (partial-inline) 18ms 0.014% 82.34% 2360ms 1.82% VecAXPY 8ms 0.0062% 82.34% 2342ms 1.81% VecAXPY_Seq 2323ms 1.79% 84.14% 2323ms 1.79% daxpy_ 2ms 0.0015% 84.14% 2151ms 1.66% VecMDot 7ms 0.0054% 84.14% 2149ms 1.66% VecMXDot_Private 2128ms 1.64% 85.79% 2137ms 1.65% VecMDot_Seq 0 0% 85.79% 2007ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 30ms 0.023% 85.81% 1655ms 1.28% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1ms 0.00077% 85.81% 1551ms 1.20% std::pow (inline) 369ms 0.29% 86.10% 1506ms 1.16% __pow 0 0% 86.10% 1397ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.10% 1186ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.10% 1186ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.10% 1186ms 0.92% boost_numeric_ublas_abs (inline) 1186ms 0.92% 87.01% 1186ms 0.92% std::abs (inline) 4ms 0.0031% 87.02% 1136ms 0.88% VecMAXPY 195ms 0.15% 87.17% 1135ms 0.88% __ieee754_pow_fma 1129ms 0.87% 88.04% 1132ms 0.87% VecMAXPY_Seq 794ms 0.61% 88.65% 1123ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 5ms 0.0039% 88.66% 1116ms 0.86% boost::numeric::ublas::matrix_assign (inline) 219ms 0.17% 88.83% 1106ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.83% 1041ms 0.8% CuboidMeshConstructor::Construct 0 0% 88.83% 1040ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.83% 1040ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0015% 88.83% 959ms 0.74% VecNorm 1ms 0.00077% 88.83% 950ms 0.73% VecNorm_Seq 3ms 0.0023% 88.83% 925ms 0.71% Element::Element 5ms 0.0039% 88.83% 910ms 0.7% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0046% 88.84% 905ms 0.7% BidomainAssembler::ComputeMatrixTerm 7ms 0.0054% 88.84% 869ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0015% 88.85% 852ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 841ms 0.65% 89.50% 841ms 0.65% [libchaste_heart.so] 9ms 0.007% 89.50% 834ms 0.64% VecScale 0 0% 89.50% 831ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 206ms 0.16% 89.66% 827ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0015% 89.66% 825ms 0.64% VecScale_Seq 817ms 0.63% 90.29% 817ms 0.63% dscal_ 814ms 0.63% 90.92% 814ms 0.63% __memset_avx2_unaligned_erms 0 0% 90.92% 797ms 0.62% PetscMemzero (inline) 1ms 0.00077% 90.92% 796ms 0.61% BidomainProblem::WriteOneStep 1ms 0.00077% 90.92% 726ms 0.56% VecDuplicate 0 0% 90.92% 686ms 0.53% VecNorm_MPI 1ms 0.00077% 90.93% 686ms 0.53% VecNorm_MPI_Default.constprop.0