File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110524ms, 91.92% of 120244ms total Dropped 1163 nodes (cum <= 601.22ms) flat flat% sum% cum cum% 0 0% 0% 120225ms 100% __libc_start_call_main 0 0% 0% 120225ms 100% __libc_start_main_impl 0 0% 0% 120225ms 100% _start 0 0% 0% 120222ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120222ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120222ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120222ms 100% main 0 0% 0% 120183ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 120183ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 120183ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120183ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120183ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120183ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.005% 0.005% 118946ms 98.92% AbstractCardiacProblem::Solve 3ms 0.0025% 0.0075% 118121ms 98.23% AbstractDynamicLinearPdeSolver::Solve 6ms 0.005% 0.012% 66597ms 55.38% LinearSystem::Solve 1ms 0.00083% 0.013% 66089ms 54.96% KSPSolve 8ms 0.0067% 0.02% 66088ms 54.96% KSPSolve_Private 9ms 0.0075% 0.027% 65663ms 54.61% KSPSolve_SYMMLQ 235ms 0.2% 0.22% 42489ms 35.34% AbstractCardiacTissue::SolveCellSystems 5ms 0.0042% 0.23% 36745ms 30.56% PCApply 6ms 0.005% 0.23% 36733ms 30.55% PCApply_BJacobi_Singleblock 1ms 0.00083% 0.23% 34025ms 28.30% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.23% 32852ms 27.32% PCApply_ICC 7ms 0.0058% 0.24% 32850ms 27.32% MatSolve 32356ms 26.91% 27.15% 32843ms 27.31% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1415ms 1.18% 28.33% 32744ms 27.23% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.33% 31622ms 26.30% KSP_PCApply.lto_priv.18 6817ms 5.67% 34.00% 28324ms 23.56% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0075% 34.00% 23279ms 19.36% MatMult 211ms 0.18% 34.18% 23270ms 19.35% MatMult_SeqAIJ (partial-inline) 22776ms 18.94% 53.12% 23270ms 19.35% MatMult_SeqAIJ_Inode (inline) 1994ms 1.66% 54.78% 14762ms 12.28% CardiacNewtonSolver::Solve 305ms 0.25% 55.03% 8918ms 7.42% AbstractCardiacTissue::UpdateCaches (inline) 4493ms 3.74% 58.77% 8687ms 7.22% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1902ms 1.58% 60.35% 8425ms 7.01% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1085ms 0.9% 61.25% 7981ms 6.64% BidomainSolver::SetupLinearSystem 1210ms 1.01% 62.26% 7369ms 6.13% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 62.26% 7067ms 5.88% KSP_PCApply (partial-inline) 4ms 0.0033% 62.26% 6442ms 5.36% KSPConvergedDefault 5913ms 4.92% 67.18% 5913ms 4.92% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3885ms 3.23% 70.41% 3919ms 3.26% __ieee754_log_fma 0 0% 70.41% 3684ms 3.06% boost::numeric::ublas::norm_inf (inline) 2505ms 2.08% 72.49% 3684ms 3.06% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.49% 3684ms 3.06% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.49% 3684ms 3.06% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0058% 72.50% 3396ms 2.82% MatNullSpaceRemove 3205ms 2.67% 75.17% 3205ms 2.67% __memcpy_avx_unaligned_erms 0 0% 75.17% 3179ms 2.64% PetscMemcpy (inline) 17ms 0.014% 75.18% 3108ms 2.58% std::pow (inline) 383ms 0.32% 75.50% 3087ms 2.57% __pow 1714ms 1.43% 76.92% 2840ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2766ms 2.30% 79.22% 2766ms 2.30% ddot_ 15ms 0.012% 79.24% 2710ms 2.25% VecCopy 3ms 0.0025% 79.24% 2694ms 2.24% VecCopy_Seq (partial-inline) 363ms 0.3% 79.54% 2693ms 2.24% __ieee754_pow_fma 12ms 0.01% 79.55% 2553ms 2.12% VecAXPY 6ms 0.005% 79.56% 2541ms 2.11% VecAXPY_Seq 2519ms 2.09% 81.65% 2519ms 2.09% daxpy_ 2ms 0.0017% 81.65% 2241ms 1.86% VecDot 0 0% 81.65% 2239ms 1.86% VecDot_Seq 1ms 0.00083% 81.65% 2239ms 1.86% VecXDot_Seq_Private.constprop.0 2ms 0.0017% 81.65% 2064ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00083% 81.66% 1928ms 1.60% VecMDot 10ms 0.0083% 81.66% 1927ms 1.60% VecMXDot_Private 1903ms 1.58% 83.25% 1910ms 1.59% VecMDot_Seq 22ms 0.018% 83.26% 1728ms 1.44% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1540ms 1.28% 84.55% 1605ms 1.33% exp_inline (inline) 1482ms 1.23% 85.78% 1482ms 1.23% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 10ms 0.0083% 85.79% 1461ms 1.22% VecMAXPY 1448ms 1.20% 86.99% 1451ms 1.21% VecMAXPY_Seq 0 0% 86.99% 1411ms 1.17% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1177ms 0.98% 87.97% 1177ms 0.98% __memset_avx2_unaligned_erms 0 0% 87.97% 1169ms 0.97% PetscMemzero (inline) 5ms 0.0042% 87.97% 1130ms 0.94% boost::numeric::ublas::matrix_assign (inline) 221ms 0.18% 88.16% 1114ms 0.93% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.16% 1093ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.16% 1093ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.16% 1093ms 0.91% boost_numeric_ublas_abs (inline) 1093ms 0.91% 89.07% 1093ms 0.91% std::abs (inline) 0 0% 89.07% 1086ms 0.9% CuboidMeshConstructor::Construct 0 0% 89.07% 1085ms 0.9% AbstractTetrahedralMesh::ConstructRegularSlabMesh 3ms 0.0025% 89.07% 1085ms 0.9% DistributedTetrahedralMesh::ConstructCuboid 0 0% 89.07% 996ms 0.83% KSP_RemoveNullSpace (inline) 2ms 0.0017% 89.07% 990ms 0.82% Element::Element 716ms 0.6% 89.67% 977ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 5ms 0.0042% 89.67% 966ms 0.8% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0033% 89.67% 965ms 0.8% VecDuplicate 2ms 0.0017% 89.68% 919ms 0.76% AbstractTetrahedralElement::AbstractTetrahedralElement 900ms 0.75% 90.42% 900ms 0.75% [libchaste_heart.so] 9ms 0.0075% 90.43% 888ms 0.74% BidomainAssembler::ComputeMatrixTerm 16ms 0.013% 90.44% 858ms 0.71% VecScale 4ms 0.0033% 90.45% 858ms 0.71% boost::numeric::ublas::c_matrix::c_matrix (inline) 6ms 0.005% 90.45% 842ms 0.7% VecScale_Seq 834ms 0.69% 91.15% 834ms 0.69% dscal_ 17ms 0.014% 91.16% 809ms 0.67% PetscMallocA 7ms 0.0058% 91.17% 792ms 0.66% PetscMallocAlign (partial-inline) 5ms 0.0042% 91.17% 788ms 0.66% VecNorm 0 0% 91.17% 772ms 0.64% VecNorm_Seq 0 0% 91.17% 761ms 0.63% BidomainProblem::WriteOneStep 1ms 0.00083% 91.17% 748ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 203ms 0.17% 91.34% 745ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 687ms 0.57% 91.91% 687ms 0.57% log_inline (inline) 0 0% 91.91% 653ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 0 0% 91.91% 611ms 0.51% boost::numeric::ublas::matrix_slice::operator= (inline) 6ms 0.005% 91.92% 607ms 0.5% VecDuplicate_Seq