File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12773ms, 85.51% of 14937ms total Dropped 760 nodes (cum <= 74.69ms) flat flat% sum% cum cum% 0 0% 0% 14929ms 99.95% __libc_start_call_main 0 0% 0% 14929ms 99.95% __libc_start_main_impl 0 0% 0% 14929ms 99.95% _start 0 0% 0% 14927ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14927ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14927ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14927ms 99.93% main 0 0% 0% 14888ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14888ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14888ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14867ms 99.53% AbstractCardiacProblem::Solve 4ms 0.027% 0.04% 11395ms 76.29% AbstractDynamicLinearPdeSolver::Solve 47ms 0.31% 0.35% 9267ms 62.04% AbstractCardiacTissue::SolveCellSystems 168ms 1.12% 1.48% 5704ms 38.19% AbstractCardiacCell::ComputeExceptVoltage 182ms 1.22% 2.70% 4854ms 32.50% AbstractOneStepIvpOdeSolver::InternalSolve 184ms 1.23% 3.93% 4070ms 27.25% EulerIvpOdeSolver::CalculateNextYValue 928ms 6.21% 10.14% 3845ms 25.74% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1675ms 11.21% 21.36% 3478ms 23.28% __GI___exp 1ms 0.0067% 21.36% 3415ms 22.86% MonodomainProblem::WriteOneStep 0 0% 21.36% 3275ms 21.93% Hdf5DataWriter::PutVector 2ms 0.013% 21.38% 3244ms 21.72% H5Dwrite 2ms 0.013% 21.39% 3213ms 21.51% H5D__write 81ms 0.54% 21.93% 2667ms 17.85% AbstractCardiacTissue::UpdateCaches (inline) 825ms 5.52% 27.46% 2543ms 17.02% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.46% 1780ms 11.92% H5D__chunk_collective_write 15ms 0.1% 27.56% 1780ms 11.92% H5F_set_coll_metadata_reads 1602ms 10.73% 38.28% 1743ms 11.67% __ieee754_exp_fma 17ms 0.11% 38.39% 1575ms 10.54% H5FD_s3comms_uriencode 4ms 0.027% 38.42% 1390ms 9.31% LinearSystem::Solve 7ms 0.047% 38.47% 1327ms 8.88% H5D__chunk_cacheable 2ms 0.013% 38.48% 1253ms 8.39% KSPSolve 1ms 0.0067% 38.49% 1251ms 8.38% KSPSolve_Private 4ms 0.027% 38.52% 1241ms 8.31% KSPSolve_CG 47ms 0.31% 38.83% 1190ms 7.97% 4ms 0.027% 38.86% 1190ms 7.97% H5F_block_write 3ms 0.02% 38.88% 1186ms 7.94% H5PB_write 2ms 0.013% 38.89% 1183ms 7.92% H5FD_write 0 0% 38.89% 1183ms 7.92% H5F__accum_write 476ms 3.19% 42.08% 1172ms 7.85% H5S_select_iterate 0 0% 42.08% 1099ms 7.36% H5D__mpio_select_write 1ms 0.0067% 42.08% 1010ms 6.76% PMPI_File_write_at_all 979ms 6.55% 48.64% 980ms 6.56% __GI_pwritev64 5ms 0.033% 48.67% 936ms 6.27% std::pow (inline) 79ms 0.53% 49.20% 931ms 6.23% __pow 118ms 0.79% 49.99% 852ms 5.70% __ieee754_pow_fma 320ms 2.14% 52.13% 714ms 4.78% MonodomainSolver::SetupLinearSystem 75ms 0.5% 52.63% 713ms 4.77% H5D__chunk_set_sizes 317ms 2.12% 54.76% 637ms 4.26% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 54.76% 627ms 4.20% PCApply 0 0% 54.76% 623ms 4.17% PCApply_BJacobi_Singleblock 0 0% 54.76% 598ms 4.00% KSPSolve_PREONLY 1ms 0.0067% 54.77% 598ms 4.00% PCApply_ICC 0 0% 54.77% 597ms 4.00% MatSolve 586ms 3.92% 58.69% 597ms 4.00% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 58.71% 546ms 3.66% MatMult 543ms 3.64% 62.34% 544ms 3.64% MatMult_SeqAIJ 70ms 0.47% 62.81% 489ms 3.27% H5S_mpio_space_type 429ms 2.87% 65.68% 429ms 2.87% log_inline (inline) 1ms 0.0067% 65.69% 416ms 2.79% KSP_PCApply.lto_priv.7 2ms 0.013% 65.70% 285ms 1.91% KSPConvergedDefault 270ms 1.81% 67.51% 271ms 1.81% exp_inline (inline) 117ms 0.78% 68.29% 242ms 1.62% TimeStepper::TimeStepper 239ms 1.60% 69.89% 239ms 1.60% [libchaste_heart.so] 31ms 0.21% 70.10% 222ms 1.49% AbstractCardiacCell::SetVoltage (partial-inline) 16ms 0.11% 70.21% 215ms 1.44% H5VM_chunk_index 0 0% 70.21% 212ms 1.42% KSP_PCApply 57ms 0.38% 70.59% 212ms 1.42% __GI___libc_malloc 110ms 0.74% 71.33% 211ms 1.41% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 171ms 1.14% 72.47% 204ms 1.37% _int_malloc 6ms 0.04% 72.51% 182ms 1.22% ompi_datatype_create 102ms 0.68% 73.19% 173ms 1.16% top12 (inline) 169ms 1.13% 74.33% 169ms 1.13% std::isinf (inline) 129ms 0.86% 75.19% 162ms 1.08% AbstractOneStepIvpOdeSolver::Solve 159ms 1.06% 76.25% 159ms 1.06% ddot_ 25ms 0.17% 76.42% 153ms 1.02% __GI___libc_free 8ms 0.054% 76.47% 153ms 1.02% ompi_datatype_destroy 126ms 0.84% 77.32% 147ms 0.98% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.02% 77.34% 147ms 0.98% MPI_Type_free 26ms 0.17% 77.51% 146ms 0.98% H5S_set_version 72ms 0.48% 77.99% 140ms 0.94% H5S_hyper_add_span_element 5ms 0.033% 78.03% 140ms 0.94% ompi_info_register_framework_params 2ms 0.013% 78.04% 139ms 0.93% Hdf5DataWriter::PutUnlimitedVariable 26ms 0.17% 78.22% 136ms 0.91% ompi_datatype_release_args 128ms 0.86% 79.07% 128ms 0.86% TimeStepper::CalculateNextTime 57ms 0.38% 79.45% 128ms 0.86% _int_free 53ms 0.35% 79.81% 120ms 0.8% H5VM_array_calc 107ms 0.72% 80.52% 119ms 0.8% AbstractParameterisedSystem::SetAnyVariable 96ms 0.64% 81.17% 118ms 0.79% AbstractParameterisedSystem::GetAnyVariable 2ms 0.013% 81.18% 118ms 0.79% VecNorm 118ms 0.79% 81.97% 118ms 0.79% __memcpy_avx_unaligned_erms 1ms 0.0067% 81.98% 112ms 0.75% VecNorm_Seq 4ms 0.027% 82.00% 110ms 0.74% PMPI_Type_create_resized 2ms 0.013% 82.02% 109ms 0.73% PMPI_File_set_view 107ms 0.72% 82.73% 107ms 0.72% __ieee754_log_fma 106ms 0.71% 83.44% 106ms 0.71% H5VM_chunk_index_scaled 47ms 0.31% 83.76% 105ms 0.7% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 83.76% 105ms 0.7% ompi_datatype_duplicate 0 0% 83.76% 100ms 0.67% VecDuplicate 0 0% 83.76% 100ms 0.67% VecDuplicate_MPI 3ms 0.02% 83.78% 97ms 0.65% opal_datatype_create_desc 94ms 0.63% 84.41% 94ms 0.63% H5VM_array_offset_pre 22ms 0.15% 84.56% 94ms 0.63% __libc_calloc 55ms 0.37% 84.92% 93ms 0.62% TimeStepper::AdvanceOneTimeStep 0 0% 84.92% 84ms 0.56% VecTDot 41ms 0.27% 85.20% 83ms 0.56% H5SL_search 0 0% 85.20% 83ms 0.56% VecTDot_Seq 0 0% 85.20% 83ms 0.56% VecXDot_Seq_Private.constprop.0 35ms 0.23% 85.43% 80ms 0.54% std::__cxx11::basic_string::basic_string 12ms 0.08% 85.51% 75ms 0.5% std::vector::_M_assign_aux (inline) 0 0% 85.51% 75ms 0.5% std::vector::assign (inline)