File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110123ms, 91.83% of 119927ms total Dropped 1137 nodes (cum <= 599.63ms) flat flat% sum% cum cum% 0 0% 0% 119912ms 100% __libc_start_call_main 0 0% 0% 119912ms 100% __libc_start_main_impl 0 0% 0% 119912ms 100% _start 0 0% 0% 119909ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119909ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119909ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119909ms 100% main 1ms 0.00083% 0.00083% 119872ms 100% AbstractConvergenceTester::Converge 0 0% 0.00083% 119872ms 100% CxxTest::RealTestDescription::run 0 0% 0.00083% 119872ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0.00083% 119872ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0.00083% 119872ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0.00083% 119872ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.005% 0.0058% 118621ms 98.91% AbstractCardiacProblem::Solve 7ms 0.0058% 0.012% 117833ms 98.25% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0058% 0.018% 66051ms 55.08% LinearSystem::Solve 0 0% 0.018% 65459ms 54.58% KSPSolve 11ms 0.0092% 0.027% 65459ms 54.58% KSPSolve_Private 12ms 0.01% 0.037% 64995ms 54.20% KSPSolve_SYMMLQ 221ms 0.18% 0.22% 43099ms 35.94% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.22% 36876ms 30.75% PCApply 0 0% 0.22% 36867ms 30.74% PCApply_BJacobi_Singleblock 0 0% 0.22% 34196ms 28.51% KSPSolve_PREONLY (partial-inline) 1361ms 1.13% 1.36% 32932ms 27.46% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 9ms 0.0075% 1.36% 32882ms 27.42% MatSolve 0 0% 1.36% 32882ms 27.42% PCApply_ICC 32358ms 26.98% 28.35% 32873ms 27.41% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 5ms 0.0042% 28.35% 31879ms 26.58% KSP_PCApply.lto_priv.18 6889ms 5.74% 34.09% 28454ms 23.73% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.005% 34.10% 21888ms 18.25% MatMult 216ms 0.18% 34.28% 21882ms 18.25% MatMult_SeqAIJ (partial-inline) 21358ms 17.81% 52.09% 21881ms 18.25% MatMult_SeqAIJ_Inode (inline) 1956ms 1.63% 53.72% 14656ms 12.22% CardiacNewtonSolver::Solve 976ms 0.81% 54.53% 9324ms 7.77% AbstractCardiacTissue::UpdateCaches (inline) 4320ms 3.60% 58.14% 8511ms 7.10% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2051ms 1.71% 59.85% 8136ms 6.78% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1121ms 0.93% 60.78% 7761ms 6.47% BidomainSolver::SetupLinearSystem 1136ms 0.95% 61.73% 7309ms 6.09% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0017% 61.73% 7148ms 5.96% KSP_PCApply (partial-inline) 5ms 0.0042% 61.73% 6441ms 5.37% KSPConvergedDefault 5923ms 4.94% 66.67% 5923ms 4.94% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3898ms 3.25% 69.92% 3949ms 3.29% __ieee754_log_fma 0 0% 69.92% 3774ms 3.15% boost::numeric::ublas::norm_inf (inline) 2581ms 2.15% 72.08% 3774ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.08% 3774ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.08% 3774ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0033% 72.08% 3588ms 2.99% MatNullSpaceRemove 3471ms 2.89% 74.97% 3471ms 2.89% __memcpy_avx_unaligned_erms 0 0% 74.97% 3447ms 2.87% PetscMemcpy (inline) 43ms 0.036% 75.01% 3263ms 2.72% std::pow (inline) 380ms 0.32% 75.33% 3210ms 2.68% __pow 16ms 0.013% 75.34% 2947ms 2.46% VecCopy 1741ms 1.45% 76.79% 2941ms 2.45% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 1ms 0.00083% 76.79% 2927ms 2.44% VecCopy_Seq (partial-inline) 2859ms 2.38% 79.18% 2859ms 2.38% ddot_ 346ms 0.29% 79.46% 2806ms 2.34% __ieee754_pow_fma 18ms 0.015% 79.48% 2516ms 2.10% VecAXPY 8ms 0.0067% 79.49% 2498ms 2.08% VecAXPY_Seq 2476ms 2.06% 81.55% 2476ms 2.06% daxpy_ 5ms 0.0042% 81.55% 2275ms 1.90% VecDot 0 0% 81.55% 2270ms 1.89% VecDot_Seq 3ms 0.0025% 81.56% 2270ms 1.89% VecXDot_Seq_Private.constprop.0 0 0% 81.56% 2077ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 5ms 0.0042% 81.56% 2071ms 1.73% VecMDot 9ms 0.0075% 81.57% 2066ms 1.72% VecMXDot_Private 2045ms 1.71% 83.27% 2050ms 1.71% VecMDot_Seq 33ms 0.028% 83.30% 1737ms 1.45% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1562ms 1.30% 84.60% 1612ms 1.34% exp_inline (inline) 9ms 0.0075% 84.61% 1513ms 1.26% VecMAXPY 1492ms 1.24% 85.86% 1504ms 1.25% VecMAXPY_Seq 0 0% 85.86% 1429ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1258ms 1.05% 86.90% 1258ms 1.05% __memset_avx2_unaligned_erms 0 0% 86.90% 1236ms 1.03% PetscMemzero (inline) 3ms 0.0025% 86.91% 1120ms 0.93% boost::numeric::ublas::matrix_assign (inline) 211ms 0.18% 87.08% 1112ms 0.93% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.08% 1101ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.08% 1101ms 0.92% CuboidMeshConstructor::Construct 3ms 0.0025% 87.09% 1101ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0017% 87.09% 1087ms 0.91% KSP_RemoveNullSpace (inline) 0 0% 87.09% 1087ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.09% 1087ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.09% 1087ms 0.91% boost_numeric_ublas_abs (inline) 1087ms 0.91% 87.99% 1087ms 0.91% std::abs (inline) 858ms 0.72% 88.71% 1082ms 0.9% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 3ms 0.0025% 88.71% 1081ms 0.9% VecDuplicate 1024ms 0.85% 89.57% 1024ms 0.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 4ms 0.0033% 89.57% 995ms 0.83% Element::Element 3ms 0.0025% 89.57% 985ms 0.82% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00083% 89.57% 934ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.005% 89.58% 901ms 0.75% PetscMallocA 10ms 0.0083% 89.59% 895ms 0.75% PetscMallocAlign (partial-inline) 5ms 0.0042% 89.59% 888ms 0.74% BidomainAssembler::ComputeMatrixTerm 4ms 0.0033% 89.59% 871ms 0.73% VecNorm 10ms 0.0083% 89.60% 869ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 89.60% 860ms 0.72% VecNorm_Seq 10ms 0.0083% 89.61% 836ms 0.7% VecScale 4ms 0.0033% 89.61% 826ms 0.69% VecScale_Seq 820ms 0.68% 90.30% 820ms 0.68% dscal_ 809ms 0.67% 90.97% 809ms 0.67% [libchaste_heart.so] 804ms 0.67% 91.64% 804ms 0.67% log_inline (inline) 2ms 0.0017% 91.64% 711ms 0.59% BidomainProblem::WriteOneStep 1ms 0.00083% 91.64% 663ms 0.55% VecDuplicate_Seq 0 0% 91.64% 648ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 1ms 0.00083% 91.64% 613ms 0.51% AbstractBidomainSolver::FinaliseLinearSystem 216ms 0.18% 91.83% 610ms 0.51% AbstractBidomainSolver::CheckCompatibilityCondition