File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12558ms, 85.18% of 14743ms total Dropped 746 nodes (cum <= 73.72ms) flat flat% sum% cum cum% 0 0% 0% 14734ms 99.94% __libc_start_call_main 0 0% 0% 14734ms 99.94% __libc_start_main_impl 0 0% 0% 14734ms 99.94% _start 0 0% 0% 14732ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14732ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14732ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14732ms 99.93% main 0 0% 0% 14692ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14692ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14692ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14671ms 99.51% AbstractCardiacProblem::Solve 4ms 0.027% 0.047% 11304ms 76.67% AbstractDynamicLinearPdeSolver::Solve 46ms 0.31% 0.36% 8981ms 60.92% AbstractCardiacTissue::SolveCellSystems 110ms 0.75% 1.11% 5423ms 36.78% AbstractCardiacCell::ComputeExceptVoltage 76ms 0.52% 1.62% 4774ms 32.38% AbstractOneStepIvpOdeSolver::InternalSolve 143ms 0.97% 2.59% 4155ms 28.18% EulerIvpOdeSolver::CalculateNextYValue 935ms 6.34% 8.93% 3964ms 26.89% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1725ms 11.70% 20.63% 3613ms 24.51% __GI___exp 0 0% 20.63% 3298ms 22.37% MonodomainProblem::WriteOneStep 2ms 0.014% 20.65% 3132ms 21.24% H5Dwrite 0 0% 20.65% 3109ms 21.09% Hdf5DataWriter::PutVector 7ms 0.047% 20.69% 3105ms 21.06% H5D__write 95ms 0.64% 21.34% 2613ms 17.72% AbstractCardiacTissue::UpdateCaches (inline) 783ms 5.31% 26.65% 2472ms 16.77% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.014% 26.66% 1868ms 12.67% H5D__chunk_collective_write 9ms 0.061% 26.72% 1866ms 12.66% H5F_set_coll_metadata_reads 1628ms 11.04% 37.77% 1812ms 12.29% __ieee754_exp_fma 24ms 0.16% 37.93% 1630ms 11.06% H5FD_s3comms_uriencode 1ms 0.0068% 37.94% 1575ms 10.68% LinearSystem::Solve 0 0% 37.94% 1457ms 9.88% KSPSolve 3ms 0.02% 37.96% 1457ms 9.88% KSPSolve_Private 3ms 0.02% 37.98% 1451ms 9.84% KSPSolve_CG 53ms 0.36% 38.34% 1244ms 8.44% 3ms 0.02% 38.36% 1244ms 8.44% H5F_block_write 4ms 0.027% 38.38% 1241ms 8.42% H5PB_write 1ms 0.0068% 38.39% 1237ms 8.39% H5FD_write 0 0% 38.39% 1237ms 8.39% H5F__accum_write 2ms 0.014% 38.40% 1136ms 7.71% H5D__mpio_select_write 10ms 0.068% 38.47% 1092ms 7.41% H5D__chunk_cacheable 1ms 0.0068% 38.48% 1031ms 6.99% PMPI_File_write_at_all 993ms 6.74% 45.21% 1000ms 6.78% __GI_pwritev64 405ms 2.75% 47.96% 938ms 6.36% H5S_select_iterate 2ms 0.014% 47.98% 858ms 5.82% std::pow (inline) 73ms 0.5% 48.47% 855ms 5.80% __pow 0 0% 48.47% 830ms 5.63% PCApply 3ms 0.02% 48.49% 829ms 5.62% PCApply_BJacobi_Singleblock 1ms 0.0068% 48.50% 783ms 5.31% KSPSolve_PREONLY 100ms 0.68% 49.18% 782ms 5.30% __ieee754_pow_fma 3ms 0.02% 49.20% 781ms 5.30% MatSolve 0 0% 49.20% 781ms 5.30% PCApply_ICC 763ms 5.18% 54.37% 778ms 5.28% MatSolve_SeqSBAIJ_1_NaturalOrdering 332ms 2.25% 56.62% 756ms 5.13% CellLuoRudy1991FromCellML::VerifyStateVariables 355ms 2.41% 59.03% 727ms 4.93% MonodomainSolver::SetupLinearSystem 0 0% 59.03% 567ms 3.85% KSP_PCApply.lto_priv.7 61ms 0.41% 59.45% 552ms 3.74% H5D__chunk_set_sizes 3ms 0.02% 59.47% 517ms 3.51% MatMult 514ms 3.49% 62.95% 514ms 3.49% MatMult_SeqAIJ 54ms 0.37% 63.32% 489ms 3.32% H5S_mpio_space_type 385ms 2.61% 65.93% 385ms 2.61% log_inline (inline) 1ms 0.0068% 65.94% 341ms 2.31% KSPConvergedDefault 136ms 0.92% 66.86% 290ms 1.97% TimeStepper::TimeStepper 275ms 1.87% 68.72% 276ms 1.87% exp_inline (inline) 0 0% 68.72% 266ms 1.80% KSP_PCApply 227ms 1.54% 70.26% 227ms 1.54% std::isinf (inline) 7ms 0.047% 70.31% 199ms 1.35% ompi_datatype_destroy 113ms 0.77% 71.08% 198ms 1.34% top12 (inline) 6ms 0.041% 71.12% 197ms 1.34% MPI_Type_free 42ms 0.28% 71.40% 197ms 1.34% __GI___libc_malloc 190ms 1.29% 72.69% 190ms 1.29% [libchaste_heart.so] 2ms 0.014% 72.71% 188ms 1.28% Hdf5DataWriter::PutUnlimitedVariable 145ms 0.98% 73.69% 184ms 1.25% _int_malloc 43ms 0.29% 73.98% 181ms 1.23% ompi_datatype_release_args 7ms 0.047% 74.03% 181ms 1.23% ompi_info_register_framework_params 36ms 0.24% 74.27% 173ms 1.17% __GI___libc_free 168ms 1.14% 75.41% 168ms 1.14% ddot_ 11ms 0.075% 75.49% 168ms 1.14% ompi_datatype_create 13ms 0.088% 75.57% 156ms 1.06% H5VM_chunk_index 154ms 1.04% 76.62% 154ms 1.04% TimeStepper::CalculateNextTime 118ms 0.8% 77.42% 153ms 1.04% AbstractOneStepIvpOdeSolver::Solve 125ms 0.85% 78.27% 149ms 1.01% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 92ms 0.62% 78.89% 146ms 0.99% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 52ms 0.35% 79.24% 137ms 0.93% _int_free 120ms 0.81% 80.06% 120ms 0.81% __ieee754_log_fma 44ms 0.3% 80.36% 117ms 0.79% std::__cxx11::basic_string::basic_string 1ms 0.0068% 80.36% 115ms 0.78% PMPI_File_set_view 8ms 0.054% 80.42% 114ms 0.77% H5S_set_version 32ms 0.22% 80.63% 113ms 0.77% AbstractCardiacCell::SetVoltage (partial-inline) 3ms 0.02% 80.66% 113ms 0.77% PMPI_Type_create_resized 66ms 0.45% 81.10% 111ms 0.75% H5S_hyper_add_span_element 6ms 0.041% 81.14% 111ms 0.75% VecNorm 44ms 0.3% 81.44% 106ms 0.72% H5VM_array_calc 5ms 0.034% 81.48% 103ms 0.7% ompi_datatype_duplicate 2ms 0.014% 81.49% 102ms 0.69% VecTDot 0 0% 81.49% 99ms 0.67% VecNorm_Seq 1ms 0.0068% 81.50% 98ms 0.66% VecTDot_Seq 0 0% 81.50% 97ms 0.66% VecDuplicate 0 0% 81.50% 97ms 0.66% VecDuplicate_MPI 0 0% 81.50% 97ms 0.66% VecXDot_Seq_Private.constprop.0 96ms 0.65% 82.15% 96ms 0.65% __memcpy_avx_unaligned_erms 93ms 0.63% 82.78% 93ms 0.63% asuint64 (inline) 87ms 0.59% 83.37% 89ms 0.6% std::vector::operator[] (inline) 1ms 0.0068% 83.38% 86ms 0.58% H5D__chunk_allocated 0 0% 83.38% 82ms 0.56% H5D__select_write 1ms 0.0068% 83.38% 82ms 0.56% H5Dgather 26ms 0.18% 83.56% 81ms 0.55% __libc_calloc 1ms 0.0068% 83.57% 80ms 0.54% H5D__contig_fill 20ms 0.14% 83.70% 80ms 0.54% opal_dss_print_buffer_contents 79ms 0.54% 84.24% 79ms 0.54% H5VM_chunk_index_scaled 1ms 0.0068% 84.24% 79ms 0.54% H5VM_opvv 3ms 0.02% 84.26% 79ms 0.54% opal_datatype_create_desc 0 0% 84.26% 78ms 0.53% H5D__contig_write 76ms 0.52% 84.78% 76ms 0.52% [libm.so.6] 57ms 0.39% 85.17% 75ms 0.51% AbstractParameterisedSystem::GetAnyVariable 2ms 0.014% 85.18% 74ms 0.5% PMPI_File_write_at