File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 93736ms, 91.66% of 102267ms total Dropped 1128 nodes (cum <= 511.33ms) flat flat% sum% cum cum% 0 0% 0% 102257ms 100% __libc_start_call_main 0 0% 0% 102257ms 100% __libc_start_main_impl 0 0% 0% 102257ms 100% _start 0 0% 0% 102255ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 102255ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 102255ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 102255ms 100% main 0 0% 0% 102213ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 102213ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 102213ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 102213ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 102213ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 102213ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0039% 0.0039% 101293ms 99.05% AbstractCardiacProblem::Solve 8ms 0.0078% 0.012% 100571ms 98.34% AbstractDynamicLinearPdeSolver::Solve 2ms 0.002% 0.014% 56560ms 55.31% LinearSystem::Solve 3ms 0.0029% 0.017% 56097ms 54.85% KSPSolve 6ms 0.0059% 0.022% 56097ms 54.85% KSPSolve_Private 9ms 0.0088% 0.031% 55786ms 54.55% KSPSolve_SYMMLQ 409ms 0.4% 0.43% 36554ms 35.74% AbstractCardiacTissue::SolveCellSystems 6ms 0.0059% 0.44% 31007ms 30.32% PCApply 3ms 0.0029% 0.44% 30992ms 30.30% PCApply_BJacobi_Singleblock 1ms 0.00098% 0.44% 29314ms 28.66% KSPSolve_PREONLY (partial-inline) 4ms 0.0039% 0.44% 28597ms 27.96% PCApply_ICC 3ms 0.0029% 0.45% 28593ms 27.96% MatSolve 28269ms 27.64% 28.09% 28590ms 27.96% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 745ms 0.73% 28.82% 28243ms 27.62% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 28.82% 26483ms 25.90% KSP_PCApply.lto_priv.18 5815ms 5.69% 34.50% 24837ms 24.29% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 4ms 0.0039% 34.51% 20290ms 19.84% MatMult 192ms 0.19% 34.70% 20286ms 19.84% MatMult_SeqAIJ (partial-inline) 19900ms 19.46% 54.16% 20283ms 19.83% MatMult_SeqAIJ_Inode (inline) 1811ms 1.77% 55.93% 13119ms 12.83% CardiacNewtonSolver::Solve 4240ms 4.15% 60.07% 7692ms 7.52% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 158ms 0.15% 60.23% 7117ms 6.96% AbstractCardiacTissue::UpdateCaches (inline) 1324ms 1.29% 61.52% 6628ms 6.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 962ms 0.94% 62.46% 6596ms 6.45% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 903ms 0.88% 63.34% 6441ms 6.30% BidomainSolver::SetupLinearSystem 0 0% 63.34% 5933ms 5.80% KSP_PCApply (partial-inline) 4ms 0.0039% 63.35% 5617ms 5.49% KSPConvergedDefault 5407ms 5.29% 68.64% 5407ms 5.29% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3209ms 3.14% 71.77% 3284ms 3.21% __ieee754_log_fma 0 0% 71.77% 3259ms 3.19% boost::numeric::ublas::norm_inf (inline) 2234ms 2.18% 73.96% 3259ms 3.19% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.96% 3259ms 3.19% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.96% 3259ms 3.19% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2525ms 2.47% 76.43% 2525ms 2.47% ddot_ 29ms 0.028% 76.46% 2508ms 2.45% std::pow (inline) 1597ms 1.56% 78.02% 2485ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 1ms 0.00098% 78.02% 2478ms 2.42% MatNullSpaceRemove 302ms 0.3% 78.31% 2468ms 2.41% __pow 2343ms 2.29% 80.60% 2343ms 2.29% __memcpy_avx512_unaligned_erms 0 0% 80.60% 2312ms 2.26% PetscMemcpy (inline) 326ms 0.32% 80.92% 2145ms 2.10% __ieee754_pow_fma 5ms 0.0049% 80.93% 2056ms 2.01% VecDot 0 0% 80.93% 2051ms 2.01% VecDot_Seq 1ms 0.00098% 80.93% 2051ms 2.01% VecXDot_Seq_Private.constprop.0 19ms 0.019% 80.95% 2022ms 1.98% VecCopy 2ms 0.002% 80.95% 1997ms 1.95% VecCopy_Seq (partial-inline) 6ms 0.0059% 80.96% 1841ms 1.80% VecAXPY 5ms 0.0049% 80.96% 1835ms 1.79% VecAXPY_Seq 1817ms 1.78% 82.74% 1817ms 1.78% daxpy_ 4ms 0.0039% 82.74% 1571ms 1.54% VecMDot 8ms 0.0078% 82.75% 1567ms 1.53% VecMXDot_Private 0 0% 82.75% 1562ms 1.53% AbstractFeVolumeIntegralAssembler::DoAssemble 1552ms 1.52% 84.27% 1556ms 1.52% VecMDot_Seq 16ms 0.016% 84.28% 1305ms 1.28% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1188ms 1.16% 85.44% 1234ms 1.21% exp_inline (inline) 0 0% 85.44% 1077ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.44% 1020ms 1% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.44% 1020ms 1% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.44% 1020ms 1% boost_numeric_ublas_abs (inline) 1020ms 1% 86.44% 1020ms 1% std::abs (inline) 929ms 0.91% 87.35% 929ms 0.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 4ms 0.0039% 87.35% 906ms 0.89% VecMAXPY 893ms 0.87% 88.23% 902ms 0.88% VecMAXPY_Seq 8ms 0.0078% 88.23% 849ms 0.83% boost::numeric::ublas::matrix_assign (inline) 180ms 0.18% 88.41% 837ms 0.82% boost::numeric::ublas::indexing_matrix_assign 812ms 0.79% 89.20% 812ms 0.79% [libchaste_heart.so] 482ms 0.47% 89.68% 788ms 0.77% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.68% 779ms 0.76% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.68% 779ms 0.76% CuboidMeshConstructor::Construct 1ms 0.00098% 89.68% 779ms 0.76% DistributedTetrahedralMesh::ConstructCuboid 1ms 0.00098% 89.68% 738ms 0.72% AbstractBidomainSolver::FinaliseLinearSystem 226ms 0.22% 89.90% 736ms 0.72% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 89.90% 709ms 0.69% VecNorm 1ms 0.00098% 89.90% 707ms 0.69% Element::Element 0 0% 89.90% 704ms 0.69% VecNorm_Seq 3ms 0.0029% 89.90% 696ms 0.68% AbstractTetrahedralElement::CalculateJacobian 8ms 0.0078% 89.91% 690ms 0.67% VecScale 2ms 0.002% 89.91% 682ms 0.67% VecScale_Seq 6ms 0.0059% 89.92% 680ms 0.66% BidomainAssembler::ComputeMatrixTerm 678ms 0.66% 90.58% 678ms 0.66% dscal_ 1ms 0.00098% 90.58% 660ms 0.65% BidomainProblem::WriteOneStep 0 0% 90.58% 653ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0059% 90.59% 633ms 0.62% boost::numeric::ublas::c_matrix::c_matrix (inline) 547ms 0.53% 91.12% 547ms 0.53% log_inline (inline) 546ms 0.53% 91.66% 546ms 0.53% __memset_avx512_unaligned_erms 1ms 0.00098% 91.66% 545ms 0.53% VecDuplicate 0 0% 91.66% 535ms 0.52% PetscMemzero (inline)