File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12764ms, 86.06% of 14832ms total Dropped 723 nodes (cum <= 74.16ms) flat flat% sum% cum cum% 0 0% 0% 14825ms 100% __libc_start_call_main 0 0% 0% 14825ms 100% __libc_start_main_impl 0 0% 0% 14825ms 100% _start 0 0% 0% 14823ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14823ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14823ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14823ms 99.94% main 0 0% 0% 14784ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14783ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14783ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14762ms 99.53% AbstractCardiacProblem::Solve 5ms 0.034% 0.047% 11440ms 77.13% AbstractDynamicLinearPdeSolver::Solve 41ms 0.28% 0.32% 9186ms 61.93% AbstractCardiacTissue::SolveCellSystems 134ms 0.9% 1.23% 5693ms 38.38% AbstractCardiacCell::ComputeExceptVoltage 164ms 1.11% 2.33% 4891ms 32.98% AbstractOneStepIvpOdeSolver::InternalSolve 181ms 1.22% 3.55% 4171ms 28.12% EulerIvpOdeSolver::CalculateNextYValue 945ms 6.37% 9.92% 3914ms 26.39% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1739ms 11.72% 21.65% 3554ms 23.96% __GI___exp 0 0% 21.65% 3250ms 21.91% MonodomainProblem::WriteOneStep 2ms 0.013% 21.66% 3098ms 20.89% Hdf5DataWriter::PutVector 1ms 0.0067% 21.67% 3084ms 20.79% H5Dwrite 2ms 0.013% 21.68% 3053ms 20.58% H5D__write 118ms 0.8% 22.48% 2662ms 17.95% AbstractCardiacTissue::UpdateCaches (inline) 778ms 5.25% 27.72% 2512ms 16.94% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.74% 1796ms 12.11% H5D__chunk_collective_write 28ms 0.19% 27.93% 1794ms 12.10% H5F_set_coll_metadata_reads 1612ms 10.87% 38.79% 1752ms 11.81% __ieee754_exp_fma 19ms 0.13% 38.92% 1590ms 10.72% H5FD_s3comms_uriencode 0 0% 38.92% 1488ms 10.03% LinearSystem::Solve 2ms 0.013% 38.94% 1354ms 9.13% KSPSolve 3ms 0.02% 38.96% 1352ms 9.12% KSPSolve_Private 4ms 0.027% 38.98% 1344ms 9.06% KSPSolve_CG 54ms 0.36% 39.35% 1237ms 8.34% 1ms 0.0067% 39.35% 1234ms 8.32% H5F_block_write 4ms 0.027% 39.38% 1233ms 8.31% H5F__accum_write 0 0% 39.38% 1233ms 8.31% H5PB_write 0 0% 39.38% 1229ms 8.29% H5FD_write 15ms 0.1% 39.48% 1155ms 7.79% H5D__chunk_cacheable 2ms 0.013% 39.50% 1151ms 7.76% H5D__mpio_select_write 1ms 0.0067% 39.50% 1055ms 7.11% PMPI_File_write_at_all 1018ms 6.86% 46.37% 1021ms 6.88% __GI_pwritev64 421ms 2.84% 49.20% 1004ms 6.77% H5S_select_iterate 4ms 0.027% 49.23% 903ms 6.09% std::pow (inline) 77ms 0.52% 49.75% 899ms 6.06% __pow 116ms 0.78% 50.53% 821ms 5.54% __ieee754_pow_fma 316ms 2.13% 52.66% 746ms 5.03% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.68% 703ms 4.74% PCApply 0 0% 52.68% 697ms 4.70% PCApply_BJacobi_Singleblock 2ms 0.013% 52.69% 660ms 4.45% KSPSolve_PREONLY 1ms 0.0067% 52.70% 653ms 4.40% MatSolve 0 0% 52.70% 653ms 4.40% PCApply_ICC 640ms 4.31% 57.01% 652ms 4.40% MatSolve_SeqSBAIJ_1_NaturalOrdering 294ms 1.98% 58.99% 643ms 4.34% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 59.01% 640ms 4.31% MatMult 637ms 4.29% 63.31% 637ms 4.29% MatMult_SeqAIJ 75ms 0.51% 63.81% 594ms 4.00% H5D__chunk_set_sizes 1ms 0.0067% 63.82% 517ms 3.49% KSP_PCApply.lto_priv.7 57ms 0.38% 64.21% 448ms 3.02% H5S_mpio_space_type 395ms 2.66% 66.87% 395ms 2.66% log_inline (inline) 274ms 1.85% 68.72% 276ms 1.86% exp_inline (inline) 114ms 0.77% 69.48% 248ms 1.67% TimeStepper::TimeStepper 1ms 0.0067% 69.49% 236ms 1.59% KSPConvergedDefault 49ms 0.33% 69.82% 206ms 1.39% __GI___libc_malloc 22ms 0.15% 69.97% 196ms 1.32% H5VM_chunk_index 0 0% 69.97% 188ms 1.27% KSP_PCApply 104ms 0.7% 70.67% 186ms 1.25% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 138ms 0.93% 71.60% 177ms 1.19% AbstractOneStepIvpOdeSolver::Solve 175ms 1.18% 72.78% 175ms 1.18% [libchaste_heart.so] 102ms 0.69% 73.47% 175ms 1.18% top12 (inline) 133ms 0.9% 74.37% 174ms 1.17% _int_malloc 173ms 1.17% 75.53% 173ms 1.17% std::isinf (inline) 31ms 0.21% 75.74% 162ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 7ms 0.047% 75.79% 160ms 1.08% ompi_datatype_create 141ms 0.95% 76.74% 158ms 1.07% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0067% 76.75% 152ms 1.02% Hdf5DataWriter::PutUnlimitedVariable 143ms 0.96% 77.71% 143ms 0.96% ddot_ 137ms 0.92% 78.63% 137ms 0.92% TimeStepper::CalculateNextTime 36ms 0.24% 78.88% 136ms 0.92% __GI___libc_free 11ms 0.074% 78.95% 128ms 0.86% MPI_Type_free 7ms 0.047% 79.00% 125ms 0.84% ompi_datatype_destroy 117ms 0.79% 79.79% 117ms 0.79% __ieee754_log_fma 23ms 0.16% 79.94% 113ms 0.76% H5S_set_version 98ms 0.66% 80.60% 111ms 0.75% AbstractParameterisedSystem::SetAnyVariable 59ms 0.4% 81.00% 111ms 0.75% H5S_hyper_add_span_element 4ms 0.027% 81.03% 110ms 0.74% VecNorm 2ms 0.013% 81.04% 108ms 0.73% PMPI_File_set_view 100ms 0.67% 81.72% 100ms 0.67% H5VM_array_offset_pre 100ms 0.67% 82.39% 100ms 0.67% std::vector::operator[] (inline) 99ms 0.67% 83.06% 99ms 0.67% __memcpy_avx_unaligned_erms 39ms 0.26% 83.32% 99ms 0.67% _int_free 6ms 0.04% 83.36% 98ms 0.66% PMPI_Type_create_resized 5ms 0.034% 83.39% 98ms 0.66% ompi_info_register_framework_params 74ms 0.5% 83.89% 97ms 0.65% AbstractParameterisedSystem::GetAnyVariable 0 0% 83.89% 97ms 0.65% VecDuplicate 2ms 0.013% 83.91% 97ms 0.65% VecDuplicate_MPI 22ms 0.15% 84.05% 97ms 0.65% ompi_datatype_release_args 0 0% 84.05% 95ms 0.64% VecNorm_Seq 40ms 0.27% 84.32% 91ms 0.61% std::__cxx11::basic_string::basic_string 36ms 0.24% 84.57% 90ms 0.61% H5VM_array_calc 1ms 0.0067% 84.57% 86ms 0.58% ompi_datatype_duplicate 29ms 0.2% 84.77% 85ms 0.57% ompi_datatype_set_args 36ms 0.24% 85.01% 80ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 50ms 0.34% 85.35% 78ms 0.53% TimeStepper::AdvanceOneTimeStep 0 0% 85.35% 78ms 0.53% VecTDot 0 0% 85.35% 77ms 0.52% VecTDot_Seq 0 0% 85.35% 77ms 0.52% VecXDot_Seq_Private.constprop.0 76ms 0.51% 85.86% 76ms 0.51% H5VM_chunk_index_scaled 26ms 0.18% 86.04% 76ms 0.51% __libc_calloc 3ms 0.02% 86.06% 75ms 0.51% opal_datatype_create_desc