File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 115588ms, 91.48% of 126357ms total Dropped 1161 nodes (cum <= 631.78ms) flat flat% sum% cum cum% 0 0% 0% 126345ms 100% __libc_start_call_main 0 0% 0% 126345ms 100% __libc_start_main_impl 0 0% 0% 126345ms 100% _start 0 0% 0% 126342ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 126342ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 126342ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 126342ms 100% main 0 0% 0% 126304ms 100% CxxTest::RealTestDescription::run 0 0% 0% 126304ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 126304ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 126304ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 126304ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 126303ms 100% AbstractConvergenceTester::Converge 4ms 0.0032% 0.0032% 125127ms 99.03% AbstractCardiacProblem::Solve 9ms 0.0071% 0.01% 124364ms 98.42% AbstractDynamicLinearPdeSolver::Solve 10ms 0.0079% 0.018% 68373ms 54.11% LinearSystem::Solve 2ms 0.0016% 0.02% 67835ms 53.69% KSPSolve 7ms 0.0055% 0.025% 67833ms 53.68% KSPSolve_Private 9ms 0.0071% 0.032% 67541ms 53.45% KSPSolve_SYMMLQ 443ms 0.35% 0.38% 46816ms 37.05% AbstractCardiacTissue::SolveCellSystems 8ms 0.0063% 0.39% 39345ms 31.14% PCApply 5ms 0.004% 0.39% 39327ms 31.12% PCApply_BJacobi_Singleblock 0 0% 0.39% 36969ms 29.26% KSPSolve_PREONLY (partial-inline) 998ms 0.79% 1.18% 36649ms 29.00% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.18% 35952ms 28.45% PCApply_ICC 8ms 0.0063% 1.19% 35950ms 28.45% MatSolve 35505ms 28.10% 29.29% 35942ms 28.44% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0016% 29.29% 33767ms 26.72% KSP_PCApply.lto_priv.18 7772ms 6.15% 35.44% 32241ms 25.52% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0055% 35.45% 22749ms 18.00% MatMult 322ms 0.25% 35.70% 22742ms 18.00% MatMult_SeqAIJ (partial-inline) 22193ms 17.56% 53.27% 22731ms 17.99% MatMult_SeqAIJ_Inode (inline) 2297ms 1.82% 55.08% 16792ms 13.29% CardiacNewtonSolver::Solve 5512ms 4.36% 59.45% 9888ms 7.83% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1569ms 1.24% 60.69% 9195ms 7.28% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 231ms 0.18% 60.87% 8867ms 7.02% AbstractCardiacTissue::UpdateCaches (inline) 1734ms 1.37% 62.24% 8306ms 6.57% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1163ms 0.92% 63.16% 7992ms 6.32% BidomainSolver::SetupLinearSystem 0 0% 63.16% 7406ms 5.86% KSP_PCApply (partial-inline) 7330ms 5.80% 68.96% 7330ms 5.80% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00079% 68.97% 7007ms 5.55% KSPConvergedDefault 4131ms 3.27% 72.24% 4243ms 3.36% __ieee754_log_fma 0 0% 72.24% 4128ms 3.27% boost::numeric::ublas::norm_inf (inline) 2895ms 2.29% 74.53% 4128ms 3.27% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.53% 4128ms 3.27% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.53% 4128ms 3.27% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3282ms 2.60% 77.12% 3282ms 2.60% ddot_ 2138ms 1.69% 78.82% 3211ms 2.54% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 5ms 0.004% 78.82% 3138ms 2.48% MatNullSpaceRemove 37ms 0.029% 78.85% 3046ms 2.41% std::pow (inline) 419ms 0.33% 79.18% 2994ms 2.37% __pow 2834ms 2.24% 81.42% 2834ms 2.24% __memcpy_avx_unaligned_erms 0 0% 81.42% 2789ms 2.21% PetscMemcpy (inline) 6ms 0.0047% 81.43% 2575ms 2.04% VecDot 1ms 0.00079% 81.43% 2569ms 2.03% VecDot_Seq 3ms 0.0024% 81.43% 2568ms 2.03% VecXDot_Seq_Private.constprop.0 356ms 0.28% 81.71% 2543ms 2.01% __ieee754_pow_fma 15ms 0.012% 81.72% 2374ms 1.88% VecCopy 3ms 0.0024% 81.73% 2354ms 1.86% VecCopy_Seq (partial-inline) 13ms 0.01% 81.74% 2096ms 1.66% VecAXPY 2ms 0.0016% 81.74% 2083ms 1.65% VecAXPY_Seq 2069ms 1.64% 83.38% 2069ms 1.64% daxpy_ 1ms 0.00079% 83.38% 1989ms 1.57% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0024% 83.38% 1967ms 1.56% VecMDot 4ms 0.0032% 83.38% 1964ms 1.55% VecMXDot_Private 1951ms 1.54% 84.93% 1957ms 1.55% VecMDot_Seq 41ms 0.032% 84.96% 1661ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1451ms 1.15% 86.11% 1499ms 1.19% exp_inline (inline) 0 0% 86.11% 1377ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.11% 1220ms 0.97% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.11% 1220ms 0.97% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.11% 1220ms 0.97% boost_numeric_ublas_abs (inline) 1220ms 0.97% 87.07% 1220ms 0.97% std::abs (inline) 3ms 0.0024% 87.08% 1166ms 0.92% VecMAXPY 1159ms 0.92% 87.99% 1163ms 0.92% VecMAXPY_Seq 10ms 0.0079% 88.00% 1089ms 0.86% boost::numeric::ublas::matrix_assign (inline) 767ms 0.61% 88.61% 1087ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 236ms 0.19% 88.79% 1069ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.79% 1011ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.79% 1011ms 0.8% CuboidMeshConstructor::Construct 2ms 0.0016% 88.80% 1011ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0024% 88.80% 1008ms 0.8% VecNorm 0 0% 88.80% 999ms 0.79% VecNorm_Seq 925ms 0.73% 89.53% 925ms 0.73% [libchaste_heart.so] 2ms 0.0016% 89.53% 905ms 0.72% Element::Element 2ms 0.0016% 89.53% 900ms 0.71% AbstractTetrahedralElement::CalculateJacobian 5ms 0.004% 89.54% 873ms 0.69% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.54% 861ms 0.68% AbstractTetrahedralElement::AbstractTetrahedralElement 7ms 0.0055% 89.54% 851ms 0.67% VecScale 4ms 0.0032% 89.55% 844ms 0.67% VecScale_Seq 1ms 0.00079% 89.55% 842ms 0.67% AbstractBidomainSolver::FinaliseLinearSystem 238ms 0.19% 89.74% 840ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 839ms 0.66% 90.40% 839ms 0.66% dscal_ 7ms 0.0055% 90.41% 837ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 707ms 0.56% 90.97% 707ms 0.56% __memset_avx2_unaligned_erms 2ms 0.0016% 90.97% 695ms 0.55% BidomainProblem::WriteOneStep 0 0% 90.97% 695ms 0.55% PetscMemzero (inline) 1ms 0.00079% 90.97% 683ms 0.54% VecDuplicate 0 0% 90.97% 678ms 0.54% VecNorm_MPI 1ms 0.00079% 90.97% 678ms 0.54% VecNorm_MPI_Default.constprop.0 642ms 0.51% 91.48% 642ms 0.51% log_inline (inline)