File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12868ms, 86.54% of 14870ms total Dropped 762 nodes (cum <= 74.35ms) flat flat% sum% cum cum% 0 0% 0% 14860ms 99.93% __libc_start_call_main 0 0% 0% 14860ms 99.93% __libc_start_main_impl 0 0% 0% 14860ms 99.93% _start 0 0% 0% 14857ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14857ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14857ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14857ms 99.91% main 0 0% 0% 14819ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14819ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14819ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14796ms 99.50% AbstractCardiacProblem::Solve 0 0% 0.02% 11436ms 76.91% AbstractDynamicLinearPdeSolver::Solve 62ms 0.42% 0.44% 8978ms 60.38% AbstractCardiacTissue::SolveCellSystems 81ms 0.54% 0.98% 5548ms 37.31% AbstractCardiacCell::ComputeExceptVoltage 102ms 0.69% 1.67% 4891ms 32.89% AbstractOneStepIvpOdeSolver::InternalSolve 193ms 1.30% 2.97% 4211ms 28.32% EulerIvpOdeSolver::CalculateNextYValue 927ms 6.23% 9.20% 3985ms 26.80% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1801ms 12.11% 21.31% 3578ms 24.06% __GI___exp 0 0% 21.31% 3294ms 22.15% MonodomainProblem::WriteOneStep 0 0% 21.31% 3169ms 21.31% Hdf5DataWriter::PutVector 0 0% 21.31% 3151ms 21.19% H5Dwrite 2ms 0.013% 21.32% 3121ms 20.99% H5D__write 113ms 0.76% 22.08% 2787ms 18.74% AbstractCardiacTissue::UpdateCaches (inline) 809ms 5.44% 27.53% 2599ms 17.48% CellLuoRudy1991FromCellML::GetIIonic 3ms 0.02% 27.55% 1890ms 12.71% H5D__chunk_collective_write 10ms 0.067% 27.61% 1887ms 12.69% H5F_set_coll_metadata_reads 1383ms 9.30% 36.91% 1698ms 11.42% __ieee754_exp_fma 24ms 0.16% 37.07% 1654ms 11.12% H5FD_s3comms_uriencode 1ms 0.0067% 37.08% 1652ms 11.11% LinearSystem::Solve 1ms 0.0067% 37.09% 1527ms 10.27% KSPSolve 4ms 0.027% 37.11% 1526ms 10.26% KSPSolve_Private 3ms 0.02% 37.14% 1514ms 10.18% KSPSolve_CG 54ms 0.36% 37.50% 1324ms 8.90% 2ms 0.013% 37.51% 1310ms 8.81% H5F_block_write 1ms 0.0067% 37.52% 1308ms 8.80% H5PB_write 1ms 0.0067% 37.53% 1307ms 8.79% H5F__accum_write 1ms 0.0067% 37.53% 1306ms 8.78% H5FD_write 1ms 0.0067% 37.54% 1218ms 8.19% H5D__mpio_select_write 8ms 0.054% 37.59% 1120ms 7.53% H5D__chunk_cacheable 1ms 0.0067% 37.60% 1099ms 7.39% PMPI_File_write_at_all 1074ms 7.22% 44.82% 1077ms 7.24% __GI_pwritev64 4ms 0.027% 44.85% 969ms 6.52% std::pow (inline) 330ms 2.22% 47.07% 965ms 6.49% H5S_select_iterate 102ms 0.69% 47.75% 965ms 6.49% __pow 66ms 0.44% 48.20% 862ms 5.80% __ieee754_pow_fma 2ms 0.013% 48.21% 824ms 5.54% PCApply 2ms 0.013% 48.22% 815ms 5.48% PCApply_BJacobi_Singleblock 2ms 0.013% 48.24% 790ms 5.31% KSPSolve_PREONLY 363ms 2.44% 50.68% 787ms 5.29% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 50.69% 782ms 5.26% MatSolve 0 0% 50.69% 782ms 5.26% PCApply_ICC 772ms 5.19% 55.88% 781ms 5.25% MatSolve_SeqSBAIJ_1_NaturalOrdering 80ms 0.54% 56.42% 654ms 4.40% H5D__chunk_set_sizes 3ms 0.02% 56.44% 621ms 4.18% MatMult 615ms 4.14% 60.57% 618ms 4.16% MatMult_SeqAIJ 1ms 0.0067% 60.58% 589ms 3.96% KSP_PCApply.lto_priv.7 66ms 0.44% 61.02% 455ms 3.06% H5S_mpio_space_type 426ms 2.86% 63.89% 426ms 2.86% log_inline (inline) 214ms 1.44% 65.33% 419ms 2.82% CellLuoRudy1991FromCellML::VerifyStateVariables 322ms 2.17% 67.49% 336ms 2.26% exp_inline (inline) 3ms 0.02% 67.51% 315ms 2.12% KSPConvergedDefault 214ms 1.44% 68.95% 259ms 1.74% top12 (inline) 112ms 0.75% 69.70% 256ms 1.72% TimeStepper::TimeStepper 0 0% 69.70% 239ms 1.61% KSP_PCApply 234ms 1.57% 71.28% 234ms 1.57% [libchaste_heart.so] 11ms 0.074% 71.35% 209ms 1.41% H5VM_chunk_index 11ms 0.074% 71.43% 198ms 1.33% ompi_datatype_destroy 4ms 0.027% 71.45% 188ms 1.26% MPI_Type_free 31ms 0.21% 71.66% 188ms 1.26% __GI___libc_free 33ms 0.22% 71.88% 178ms 1.20% __GI___libc_malloc 178ms 1.20% 73.08% 178ms 1.20% ddot_ 133ms 0.89% 73.97% 169ms 1.14% _int_malloc 46ms 0.31% 74.28% 167ms 1.12% AbstractCardiacCell::SetVoltage (partial-inline) 122ms 0.82% 75.10% 165ms 1.11% AbstractOneStepIvpOdeSolver::Solve 6ms 0.04% 75.14% 165ms 1.11% ompi_info_register_framework_params 45ms 0.3% 75.45% 164ms 1.10% ompi_datatype_release_args 13ms 0.087% 75.53% 163ms 1.10% ompi_datatype_create 54ms 0.36% 75.90% 157ms 1.06% _int_free 149ms 1.00% 76.90% 149ms 1.00% asuint64 (inline) 145ms 0.98% 77.87% 145ms 0.98% TimeStepper::CalculateNextTime 125ms 0.84% 78.72% 143ms 0.96% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 2ms 0.013% 78.73% 137ms 0.92% PMPI_File_set_view 31ms 0.21% 78.94% 135ms 0.91% H5S_set_version 2ms 0.013% 78.95% 125ms 0.84% Hdf5DataWriter::PutUnlimitedVariable 49ms 0.33% 79.28% 123ms 0.83% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 56ms 0.38% 79.66% 123ms 0.83% H5S_hyper_add_span_element 0 0% 79.66% 112ms 0.75% VecNorm 108ms 0.73% 80.38% 108ms 0.73% __ieee754_log_fma 107ms 0.72% 81.10% 107ms 0.72% H5VM_chunk_index_scaled 0 0% 81.10% 106ms 0.71% VecTDot 0 0% 81.10% 106ms 0.71% VecTDot_Seq 0 0% 81.10% 106ms 0.71% VecXDot_Seq_Private.constprop.0 35ms 0.24% 81.34% 104ms 0.7% H5VM_array_calc 104ms 0.7% 82.04% 104ms 0.7% __memcpy_avx_unaligned_erms 0 0% 82.04% 103ms 0.69% VecDuplicate 3ms 0.02% 82.06% 103ms 0.69% VecDuplicate_MPI 1ms 0.0067% 82.06% 103ms 0.69% VecNorm_Seq 82ms 0.55% 82.62% 100ms 0.67% AbstractParameterisedSystem::SetAnyVariable 75ms 0.5% 83.12% 98ms 0.66% AbstractParameterisedSystem::GetAnyVariable 4ms 0.027% 83.15% 95ms 0.64% PMPI_Type_create_resized 91ms 0.61% 83.76% 91ms 0.61% H5VM_array_offset_pre 63ms 0.42% 84.18% 88ms 0.59% TimeStepper::AdvanceOneTimeStep 1ms 0.0067% 84.19% 88ms 0.59% ompi_datatype_duplicate 5ms 0.034% 84.22% 85ms 0.57% opal_datatype_create_desc 0 0% 84.22% 83ms 0.56% std::vector::_M_assign_aux (inline) 0 0% 84.22% 83ms 0.56% std::vector::assign (inline) 28ms 0.19% 84.41% 81ms 0.54% __libc_calloc 80ms 0.54% 84.95% 80ms 0.54% [libm.so.6] 33ms 0.22% 85.17% 78ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline) 12ms 0.081% 85.25% 78ms 0.52% opal_dss_print_buffer_contents 77ms 0.52% 85.77% 77ms 0.52% ReplicatableVector::operator[] 77ms 0.52% 86.29% 77ms 0.52% std::isinf (inline) 37ms 0.25% 86.54% 76ms 0.51% H5SL_search