File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 288ms, 88.07% of 327ms total Dropped 141 nodes (cum <= 1.64ms) flat flat% sum% cum cum% 0 0% 0% 317ms 96.94% __libc_start_call_main 0 0% 0% 317ms 96.94% __libc_start_main_impl 0 0% 0% 317ms 96.94% _start 0 0% 0% 315ms 96.33% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 315ms 96.33% CxxTest::TestRunner::runAllTests 0 0% 0% 315ms 96.33% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 315ms 96.33% main 0 0% 0% 284ms 86.85% CxxTest::RealTestDescription::run 0 0% 0% 284ms 86.85% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 284ms 86.85% CxxTest::TestRunner::runTest (inline) 0 0% 0% 284ms 86.85% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 284ms 86.85% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 281ms 85.93% AbstractCardiacProblem::Solve 0 0% 0% 280ms 85.63% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 251ms 76.76% LinearSystem::Solve 0 0% 0% 250ms 76.45% KSPSolve 0 0% 0% 250ms 76.45% KSPSolve_CG 0 0% 0% 250ms 76.45% KSPSolve_Private 0 0% 0% 139ms 42.51% KSP_PCApply.lto_priv.7 0 0% 0% 128ms 39.14% PCApply 1ms 0.31% 0.31% 128ms 39.14% PCApply_BJacobi_Singleblock 0 0% 0.31% 106ms 32.42% KSPSolve_PREONLY (partial-inline) 1ms 0.31% 0.61% 99ms 30.28% MatSolve 0 0% 0.61% 99ms 30.28% PCApply_ICC 97ms 29.66% 30.28% 98ms 29.97% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.31% 30.58% 48ms 14.68% MatMult 3ms 0.92% 31.50% 47ms 14.37% MatMult_SeqAIJ (partial-inline) 43ms 13.15% 44.65% 45ms 13.76% MatMult_SeqAIJ_Inode (inline) 41ms 12.54% 57.19% 41ms 12.54% ddot_ 2ms 0.61% 57.80% 28ms 8.56% 0 0% 57.80% 26ms 7.95% CxxTest::RealWorldDescription::setUp 0 0% 57.80% 26ms 7.95% PMPI_Init_thread 0 0% 57.80% 26ms 7.95% PetscInitialize 0 0% 57.80% 26ms 7.95% PetscSetup::setUpWorld 0 0% 57.80% 26ms 7.95% PetscSetupUtils::CommonSetup 0 0% 57.80% 26ms 7.95% PetscSetupUtils::InitialisePetsc 0 0% 57.80% 26ms 7.95% ompi_mpi_init 0 0% 57.80% 25ms 7.65% AbstractCardiacTissue::SolveCellSystems 0 0% 57.80% 25ms 7.65% VecTDot 0 0% 57.80% 25ms 7.65% VecTDot_Seq 0 0% 57.80% 25ms 7.65% VecXDot_Seq_Private.constprop.0 0 0% 57.80% 24ms 7.34% MatNullSpaceRemove 0 0% 57.80% 19ms 5.81% AbstractCardiacCell::ComputeExceptVoltage 0 0% 57.80% 19ms 5.81% AbstractOneStepIvpOdeSolver::InternalSolve 5ms 1.53% 59.33% 18ms 5.50% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 59.33% 18ms 5.50% EulerIvpOdeSolver::CalculateNextYValue 0 0% 59.33% 18ms 5.50% orte_init 0 0% 59.33% 16ms 4.89% VecNorm 0 0% 59.33% 16ms 4.89% VecNorm_Seq 0 0% 59.33% 13ms 3.98% VecMAXPY 13ms 3.98% 63.30% 13ms 3.98% VecMAXPY_Seq 0 0% 63.30% 12ms 3.67% VecAXPY 0 0% 63.30% 12ms 3.67% VecAXPY_Seq 0 0% 63.30% 12ms 3.67% hwloc_topology_load 0 0% 63.30% 12ms 3.67% mca_base_framework_open 0 0% 63.30% 12ms 3.67% mca_base_framework_register 1ms 0.31% 63.61% 11ms 3.36% VecMDot 11ms 3.36% 66.97% 11ms 3.36% daxpy_ 1ms 0.31% 67.28% 11ms 3.36% hwloc_linux_get_tid_last_cpu_location 0 0% 67.28% 11ms 3.36% mca_base_framework_components_register 10ms 3.06% 70.34% 10ms 3.06% VecMDot_Seq 0 0% 70.34% 10ms 3.06% VecMXDot_Private 2ms 0.61% 70.95% 10ms 3.06% __GI___exp 0 0% 70.95% 10ms 3.06% __GI__dl_catch_exception 0 0% 70.95% 10ms 3.06% _dl_catch_error 0 0% 70.95% 10ms 3.06% _dlerror_run 0 0% 70.95% 9ms 2.75% VecAYPX 9ms 2.75% 73.70% 9ms 2.75% VecAYPX_Seq 0 0% 73.70% 9ms 2.75% VecDuplicate 0 0% 73.70% 9ms 2.75% VecDuplicate_Seq 0 0% 73.70% 9ms 2.75% ___dlopen 0 0% 73.70% 9ms 2.75% _dl_open 0 0% 73.70% 9ms 2.75% dl_open_worker 0 0% 73.70% 9ms 2.75% dlopen_doit 0 0% 73.70% 9ms 2.75% dlopen_implementation (inline) 0 0% 73.70% 9ms 2.75% opal_stackframe_output 0 0% 73.70% 8ms 2.45% _dl_init 0 0% 73.70% 8ms 2.45% call_init (inline) 0 0% 73.70% 8ms 2.45% mca_base_component_find 0 0% 73.70% 8ms 2.45% mca_base_component_repository_open 0 0% 73.70% 7ms 2.14% KSP_PCApply (inline) 6ms 1.83% 75.54% 7ms 2.14% __ieee754_exp_fma 6ms 1.83% 77.37% 6ms 1.83% __GI___libc_read 0 0% 77.37% 6ms 1.83% dl_open_worker_begin 1ms 0.31% 77.68% 5ms 1.53% PetscMallocA 0 0% 77.68% 5ms 1.53% VecSetType 0 0% 77.68% 5ms 1.53% _dl_start_user 0 0% 77.68% 5ms 1.53% clone3 0 0% 77.68% 5ms 1.53% event_base_loop 0 0% 77.68% 5ms 1.53% opal_hwloc_base_get_topology 0 0% 77.68% 5ms 1.53% orte_ess_base_proc_binding 0 0% 77.68% 5ms 1.53% start_thread 0 0% 77.68% 4ms 1.22% CxxTest::RealWorldDescription::tearDown 0 0% 77.68% 4ms 1.22% PetscFinalize 0 0% 77.68% 4ms 1.22% PetscMallocAlign (partial-inline) 0 0% 77.68% 4ms 1.22% PetscMemzero (inline) 0 0% 77.68% 4ms 1.22% PetscSetup::tearDownWorld 0 0% 77.68% 4ms 1.22% PetscSetupUtils::CommonFinalize 0 0% 77.68% 4ms 1.22% VecCreate 0 0% 77.68% 4ms 1.22% VecCreate_Seq 0 0% 77.68% 4ms 1.22% mca_base_framework_components_open 0 0% 77.68% 4ms 1.22% mca_topo_base_dist_graph_neighbors_count 0 0% 77.68% 4ms 1.22% ompi_mpi_finalize 0 0% 77.68% 3ms 0.92% AbstractCardiacProblem::Initialise 0 0% 77.68% 3ms 0.92% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.31% 77.98% 3ms 0.92% BidomainSolver::SetupLinearSystem 1ms 0.31% 78.29% 3ms 0.92% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.31% 78.59% 3ms 0.92% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 78.59% 3ms 0.92% PetscMemcpy (inline) 3ms 0.92% 79.51% 3ms 0.92% [libchaste_heart.so] 2ms 0.61% 80.12% 3ms 0.92% __GI___clock_nanosleep 1ms 0.31% 80.43% 3ms 0.92% __GI___libc_malloc 0 0% 80.43% 3ms 0.92% __GI___nanosleep 3ms 0.92% 81.35% 3ms 0.92% __memcpy_avx512_unaligned_erms 3ms 0.92% 82.26% 3ms 0.92% __memset_avx512_unaligned_erms 0 0% 82.26% 3ms 0.92% _dl_lookup_symbol_x 0 0% 82.26% 3ms 0.92% _dl_open_relocate_one_object (inline) 0 0% 82.26% 3ms 0.92% _dl_relocate_object 3ms 0.92% 83.18% 3ms 0.92% do_lookup_x 0 0% 83.18% 3ms 0.92% elf_dynamic_do_Rela (inline) 0 0% 83.18% 3ms 0.92% elf_machine_rela (inline) 0 0% 83.18% 3ms 0.92% event_del_nolock_ 0 0% 83.18% 3ms 0.92% mca_base_component_var_register 0 0% 83.18% 3ms 0.92% mca_base_var_group_register 0 0% 83.18% 3ms 0.92% mca_base_var_register 0 0% 83.18% 3ms 0.92% resolve_map (inline) 0 0% 83.18% 3ms 0.92% usleep 0 0% 83.18% 2ms 0.61% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 83.18% 2ms 0.61% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.18% 2ms 0.61% KSPConvergedReasonViewFromOptions 1ms 0.31% 83.49% 2ms 0.61% PetscHeaderCreate_Private 0 0% 83.49% 2ms 0.61% PetscOptionsFindPair 0 0% 83.49% 2ms 0.61% PetscOptionsGetViewer 1ms 0.31% 83.79% 2ms 0.61% TrianglesMeshReader::GetNextItemFromStream 0 0% 83.79% 2ms 0.61% VecCopy 0 0% 83.79% 2ms 0.61% VecCopy_Seq (partial-inline) 1ms 0.31% 84.10% 2ms 0.61% VecCreate_Seq_Private 2ms 0.61% 84.71% 2ms 0.61% VecRestoreArray 0 0% 84.71% 2ms 0.61% [hwloc_pci.so] 0 0% 84.71% 2ms 0.61% [libpciaccess.so.0.11.1] 0 0% 84.71% 2ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.71% 2ms 0.61% __GI_exit 2ms 0.61% 85.32% 2ms 0.61% __GI_getenv 0 0% 85.32% 2ms 0.61% __cxa_finalize 0 0% 85.32% 2ms 0.61% __ieee754_pow_fma 0 0% 85.32% 2ms 0.61% __pow 0 0% 85.32% 2ms 0.61% __run_exit_handlers 2ms 0.61% 85.93% 2ms 0.61% __strcmp_evex 2ms 0.61% 86.54% 2ms 0.61% __strlen_evex 0 0% 86.54% 2ms 0.61% _dl_call_fini 0 0% 86.54% 2ms 0.61% _dl_fini 0 0% 86.54% 2ms 0.61% _dl_map_object 0 0% 86.54% 2ms 0.61% _dl_map_object_deps 2ms 0.61% 87.16% 2ms 0.61% _int_malloc 2ms 0.61% 87.77% 2ms 0.61% asuint64 (inline) 0 0% 87.77% 2ms 0.61% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 87.77% 2ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.77% 2ms 0.61% boost::serialization::singleton::get_instance 0 0% 87.77% 2ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_register 1ms 0.31% 88.07% 2ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 88.07% 2ms 0.61% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.07% 2ms 0.61% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 88.07% 2ms 0.61% evsig_set_handler_ 0 0% 88.07% 2ms 0.61% mca_base_components_close 0 0% 88.07% 2ms 0.61% mca_base_framework_close 0 0% 88.07% 2ms 0.61% opal_timer_base_get_freq 0 0% 88.07% 2ms 0.61% openaux 0 0% 88.07% 2ms 0.61% pci_get_strings 0 0% 88.07% 2ms 0.61% std::pow (inline)