File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 10649ms, 89.30% of 11925ms total Dropped 642 nodes (cum <= 59.62ms) flat flat% sum% cum cum% 0 0% 0% 11919ms 99.95% __libc_start_call_main 0 0% 0% 11919ms 99.95% __libc_start_main_impl 0 0% 0% 11919ms 99.95% _start 0 0% 0% 11917ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11917ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11917ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11917ms 99.93% main 0 0% 0% 11886ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11886ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11886ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0084% 0.0084% 11869ms 99.53% AbstractCardiacProblem::Solve 1ms 0.0084% 0.017% 9093ms 76.25% AbstractDynamicLinearPdeSolver::Solve 86ms 0.72% 0.74% 7157ms 60.02% AbstractCardiacTissue::SolveCellSystems 64ms 0.54% 1.27% 4395ms 36.86% AbstractCardiacCell::ComputeExceptVoltage 86ms 0.72% 2.00% 3958ms 33.19% AbstractOneStepIvpOdeSolver::InternalSolve 107ms 0.9% 2.89% 3388ms 28.41% EulerIvpOdeSolver::CalculateNextYValue 803ms 6.73% 9.63% 3245ms 27.21% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.63% 2730ms 22.89% MonodomainProblem::WriteOneStep 0 0% 9.63% 2669ms 22.38% Hdf5DataWriter::PutVector 0 0% 9.63% 2632ms 22.07% H5Dwrite 978ms 8.20% 17.83% 2625ms 22.01% __GI___exp 3ms 0.025% 17.85% 2613ms 21.91% H5D__write 95ms 0.8% 18.65% 1995ms 16.73% AbstractCardiacTissue::UpdateCaches (inline) 489ms 4.10% 22.75% 1857ms 15.57% CellLuoRudy1991FromCellML::GetIIonic 0 0% 22.75% 1543ms 12.94% H5D__chunk_collective_write 8ms 0.067% 22.82% 1543ms 12.94% H5F_set_coll_metadata_reads 1427ms 11.97% 34.78% 1453ms 12.18% __ieee754_exp_fma 6ms 0.05% 34.83% 1351ms 11.33% H5FD_s3comms_uriencode 0 0% 34.83% 1187ms 9.95% LinearSystem::Solve 0 0% 34.83% 1129ms 9.47% KSPSolve 2ms 0.017% 34.85% 1129ms 9.47% KSPSolve_Private 4ms 0.034% 34.88% 1121ms 9.40% KSPSolve_CG 17ms 0.14% 35.03% 1092ms 9.16% 0 0% 35.03% 1069ms 8.96% H5FD_write 0 0% 35.03% 1069ms 8.96% H5F__accum_write 0 0% 35.03% 1069ms 8.96% H5F_block_write 0 0% 35.03% 1069ms 8.96% H5PB_write 5ms 0.042% 35.07% 1024ms 8.59% H5D__chunk_cacheable 1ms 0.0084% 35.08% 1023ms 8.58% H5D__mpio_select_write 0 0% 35.08% 999ms 8.38% PMPI_File_write_at_all 981ms 8.23% 43.30% 990ms 8.30% __GI_pwritev64 313ms 2.62% 45.93% 923ms 7.74% H5S_select_iterate 16ms 0.13% 46.06% 775ms 6.50% std::pow (inline) 36ms 0.3% 46.36% 756ms 6.34% __pow 260ms 2.18% 48.55% 735ms 6.16% MonodomainSolver::SetupLinearSystem 39ms 0.33% 48.87% 712ms 5.97% __ieee754_pow_fma 2ms 0.017% 48.89% 639ms 5.36% PCApply 0 0% 48.89% 636ms 5.33% PCApply_BJacobi_Singleblock 55ms 0.46% 49.35% 620ms 5.20% H5D__chunk_set_sizes 0 0% 49.35% 613ms 5.14% KSPSolve_PREONLY 1ms 0.0084% 49.36% 609ms 5.11% MatSolve 0 0% 49.36% 609ms 5.11% PCApply_ICC 606ms 5.08% 54.44% 608ms 5.10% MatSolve_SeqSBAIJ_1_NaturalOrdering 373ms 3.13% 57.57% 577ms 4.84% CellLuoRudy1991FromCellML::VerifyStateVariables 4ms 0.034% 57.60% 536ms 4.49% MatMult 531ms 4.45% 62.05% 532ms 4.46% MatMult_SeqAIJ 508ms 4.26% 66.31% 508ms 4.26% [libchaste_heart.so] 0 0% 66.31% 413ms 3.46% KSP_PCApply.lto_priv.7 350ms 2.94% 69.25% 350ms 2.94% log_inline (inline) 43ms 0.36% 69.61% 348ms 2.92% H5S_mpio_space_type 269ms 2.26% 71.87% 312ms 2.62% exp_inline (inline) 27ms 0.23% 72.09% 283ms 2.37% H5VM_chunk_index 0 0% 72.09% 274ms 2.30% KSPConvergedDefault 98ms 0.82% 72.91% 261ms 2.19% TimeStepper::TimeStepper 228ms 1.91% 74.83% 228ms 1.91% H5VM_chunk_index_scaled 0 0% 74.83% 226ms 1.90% KSP_PCApply 223ms 1.87% 76.70% 223ms 1.87% [libm.so.6] 18ms 0.15% 76.85% 178ms 1.49% ompi_datatype_destroy 5ms 0.042% 76.89% 175ms 1.47% MPI_Type_free 158ms 1.32% 78.21% 158ms 1.32% TimeStepper::CalculateNextTime 17ms 0.14% 78.36% 154ms 1.29% __GI___libc_free 61ms 0.51% 78.87% 145ms 1.22% __GI___libc_malloc 38ms 0.32% 79.19% 145ms 1.22% ompi_datatype_release_args 2ms 0.017% 79.20% 145ms 1.22% ompi_info_register_framework_params 90ms 0.75% 79.96% 137ms 1.15% _int_free 4ms 0.034% 79.99% 123ms 1.03% ompi_datatype_create 119ms 1% 80.99% 119ms 1% [libchaste_ode.so] 49ms 0.41% 81.40% 113ms 0.95% std::__cxx11::basic_string::basic_string 21ms 0.18% 81.58% 111ms 0.93% AbstractCardiacCell::SetVoltage (partial-inline) 56ms 0.47% 82.05% 105ms 0.88% H5S_hyper_add_span_element 25ms 0.21% 82.26% 105ms 0.88% H5S_set_version 105ms 0.88% 83.14% 105ms 0.88% ddot_ 58ms 0.49% 83.62% 101ms 0.85% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 92ms 0.77% 84.39% 92ms 0.77% __ieee754_log_fma 67ms 0.56% 84.96% 89ms 0.75% _int_malloc 71ms 0.6% 85.55% 88ms 0.74% AbstractOneStepIvpOdeSolver::Solve 26ms 0.22% 85.77% 80ms 0.67% H5VM_array_calc 29ms 0.24% 86.01% 78ms 0.65% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 86.01% 71ms 0.6% VecNorm 69ms 0.58% 86.59% 69ms 0.58% asuint64 (inline) 24ms 0.2% 86.79% 68ms 0.57% ompi_datatype_set_args 37ms 0.31% 87.10% 66ms 0.55% TimeStepper::AdvanceOneTimeStep 48ms 0.4% 87.51% 66ms 0.55% __libc_calloc 7ms 0.059% 87.56% 66ms 0.55% opal_dss_print_buffer_contents 45ms 0.38% 87.94% 64ms 0.54% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0084% 87.95% 64ms 0.54% opal_datatype_create_desc 63ms 0.53% 88.48% 63ms 0.53% ReplicatableVector::operator[] 21ms 0.18% 88.65% 61ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 35ms 0.29% 88.95% 61ms 0.51% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0084% 88.96% 61ms 0.51% VecNorm_Seq 0 0% 88.96% 61ms 0.51% VecTDot 35ms 0.29% 89.25% 61ms 0.51% std::char_traits::length (inline) 1ms 0.0084% 89.26% 60ms 0.5% Hdf5DataWriter::PutUnlimitedVariable 5ms 0.042% 89.30% 60ms 0.5% PMPI_Type_vector 0 0% 89.30% 60ms 0.5% VecTDot_Seq 0 0% 89.30% 60ms 0.5% VecXDot_Seq_Private.constprop.0